RNA–Protein interactions for RNA: ENSMUST00000167671.1

Ckap4-202, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-202ENSMUST00000167671 Terf2O35144 541 aa21.93■■□□□ 1.1
Ckap4-202ENSMUST00000167671 Ssh1Q76I79 1042 aa21.93■■□□□ 1.1
Ckap4-202ENSMUST00000167671 Adgrl3Q80TS3 1537 aa21.93■■□□□ 1.1
Ckap4-202ENSMUST00000167671 Plcb2A3KGF7 1181 aa21.93■■□□□ 1.1
Ckap4-202ENSMUST00000167671 Ythdc2B2RR83 1445 aaKnown RBP21.92■■□□□ 1.1
Ckap4-202ENSMUST00000167671 Tmco5bQ80X59 307 aa21.92■■□□□ 1.1
Ckap4-202ENSMUST00000167671 Rfx1P48377 963 aa21.91■■□□□ 1.1
Ckap4-202ENSMUST00000167671 Hfm1D3Z4R1 1434 aa21.91■■□□□ 1.1
Ckap4-202ENSMUST00000167671 Pdcl3Q8BVF2 240 aa21.91■■□□□ 1.1
Ckap4-202ENSMUST00000167671 Mcm4P49717 862 aa21.9■■□□□ 1.1
Ckap4-202ENSMUST00000167671 G3bp1P97855 465 aaKnown RBP21.9■■□□□ 1.1
Ckap4-202ENSMUST00000167671 Ttc37F8VPK0 1563 aa21.9■■□□□ 1.1
Ckap4-202ENSMUST00000167671 MaddQ80U28 1577 aa21.9■■□□□ 1.1
Ckap4-202ENSMUST00000167671 Trpm1Q2TV84 1622 aa21.89■■□□□ 1.1
Ckap4-202ENSMUST00000167671 Cavin4A2AMM0 362 aa21.88■■□□□ 1.09
Ckap4-202ENSMUST00000167671 SkilQ60665 675 aa21.88■■□□□ 1.09
Ckap4-202ENSMUST00000167671 Nsfl1cQ9CZ44 370 aaKnown RBP21.88■■□□□ 1.09
Ckap4-202ENSMUST00000167671 Adgrl1Q80TR1 1466 aa21.87■■□□□ 1.09
Ckap4-202ENSMUST00000167671 Gli2Q0VGT2 1544 aa21.87■■□□□ 1.09
Ckap4-202ENSMUST00000167671 Ankrd50F7BE84 1390 aa21.86■■□□□ 1.09
Ckap4-202ENSMUST00000167671 Plxnc1Q9QZC2 1574 aa21.86■■□□□ 1.09
Ckap4-202ENSMUST00000167671 Il4rP16382 810 aa21.86■■□□□ 1.09
Ckap4-202ENSMUST00000167671 Kiaa0556Q8C753 1610 aa21.86■■□□□ 1.09
Ckap4-202ENSMUST00000167671 Eif2ak4Q9QZ05 1648 aa21.85■■□□□ 1.09
Ckap4-202ENSMUST00000167671 Ttc21aQ8C0S4 1314 aa21.85■■□□□ 1.09
Ckap4-202ENSMUST00000167671 Slc52a2Q9D8F3 450 aa21.84■■□□□ 1.09
Ckap4-202ENSMUST00000167671 Ptch1Q61115 1434 aa21.83■■□□□ 1.09
Ckap4-202ENSMUST00000167671 Shq1Q7TMX5 569 aa21.83■■□□□ 1.09
Ckap4-202ENSMUST00000167671 GorabQ8BRM2 368 aa21.83■■□□□ 1.09
Ckap4-202ENSMUST00000167671 KnstrnQ9D9Z1 312 aaKnown RBP21.83■■□□□ 1.09
Ckap4-202ENSMUST00000167671 Topbp1Q6ZQF0 1515 aa21.83■■□□□ 1.09
Ckap4-202ENSMUST00000167671 OvosQ3UU35 1456 aa21.83■■□□□ 1.08
Ckap4-202ENSMUST00000167671 Hs1bp3Q3TC93 395 aa21.83■■□□□ 1.08
Ckap4-202ENSMUST00000167671 Ino80Q6ZPV2 1559 aa21.83■■□□□ 1.08
Ckap4-202ENSMUST00000167671 Znf692Q3U381 531 aa21.82■■□□□ 1.08
Ckap4-202ENSMUST00000167671 Prdm2A2A7B5 1709 aaKnown RBP21.82■■□□□ 1.08
Ckap4-202ENSMUST00000167671 Brd1E9PZ26 1189 aaKnown RBP21.82■■□□□ 1.08
Ckap4-202ENSMUST00000167671 Slc12a5Q91V14 1138 aa21.82■■□□□ 1.08
Ckap4-202ENSMUST00000167671 Phf14Q9D4H9 881 aa21.82■■□□□ 1.08
Ckap4-202ENSMUST00000167671 Hecw2Q6I6G8 1578 aa21.81■■□□□ 1.08
Ckap4-202ENSMUST00000167671 DekQ7TNV0 380 aaKnown RBP21.81■■□□□ 1.08
Ckap4-202ENSMUST00000167671 PalmQ9Z0P4 383 aa21.81■■□□□ 1.08
Ckap4-202ENSMUST00000167671 4933402E13RikQ9D4D2 429 aa21.8■■□□□ 1.08
Ckap4-202ENSMUST00000167671 PtprtQ99M80 1454 aa21.8■■□□□ 1.08
Ckap4-202ENSMUST00000167671 Nrxn1Q9CS84 1514 aa21.8■■□□□ 1.08
Ckap4-202ENSMUST00000167671 Tfip11Q9ERA6 838 aaKnown RBP21.8■■□□□ 1.08
Ckap4-202ENSMUST00000167671 Ncbp3Q8BZR9 615 aaKnown RBP21.79■■□□□ 1.08
Ckap4-202ENSMUST00000167671 NinlQ6ZQ12 1394 aa21.79■■□□□ 1.08
Ckap4-202ENSMUST00000167671 Ccdc171E9Q1U1 1324 aa21.79■■□□□ 1.08
Ckap4-202ENSMUST00000167671 Med14A2ABV5 1459 aaKnown RBP21.79■■□□□ 1.08
Ckap4-202ENSMUST00000167671 Swt1Q9DBQ9 907 aa21.78■■□□□ 1.08
Ckap4-202ENSMUST00000167671 Ift172Q6VH22 1749 aa21.78■■□□□ 1.08
Ckap4-202ENSMUST00000167671 Vsig10D3YX43 558 aa21.78■■□□□ 1.08
Ckap4-202ENSMUST00000167671 Gtf2a1Q99PM3 378 aa21.78■■□□□ 1.08
Ckap4-202ENSMUST00000167671 Depdc5P61460 1591 aa21.78■■□□□ 1.08
Ckap4-202ENSMUST00000167671 Pknox2Q8BG99 474 aa21.77■■□□□ 1.08
Ckap4-202ENSMUST00000167671 Q3UPC7 1272 aa21.77■■□□□ 1.08
Ckap4-202ENSMUST00000167671 Plekhm2Q80TQ5 1018 aa21.77■■□□□ 1.08
Ckap4-202ENSMUST00000167671 Gsto1O09131 240 aa21.76■■□□□ 1.07
Ckap4-202ENSMUST00000167671 FanciQ8K368 1330 aa21.76■■□□□ 1.07
Ckap4-202ENSMUST00000167671 Ciz1Q8VEH2 845 aa21.76■■□□□ 1.07
Ckap4-202ENSMUST00000167671 Dmrtc1Q9D9R7 182 aa21.76■■□□□ 1.07
Ckap4-202ENSMUST00000167671 Ddit3P35639 168 aa21.75■■□□□ 1.07
Ckap4-202ENSMUST00000167671 Paxip1Q6NZQ4 1056 aa21.75■■□□□ 1.07
Ckap4-202ENSMUST00000167671 Birc3O08863 600 aa21.74■■□□□ 1.07
Ckap4-202ENSMUST00000167671 SlkO54988 1233 aa21.74■■□□□ 1.07
Ckap4-202ENSMUST00000167671 Cdk19Q8BWD8 501 aa21.74■■□□□ 1.07
Ckap4-202ENSMUST00000167671 Cdc37l1Q9CZP7 335 aa21.74■■□□□ 1.07
Ckap4-202ENSMUST00000167671 Tecpr2Q3UH45 1423 aa21.74■■□□□ 1.07
Ckap4-202ENSMUST00000167671 Nsd3Q6P2L6 1439 aa21.74■■□□□ 1.07
Ckap4-202ENSMUST00000167671 Gm10093D3YYI8 482 aa21.74■■□□□ 1.07
Ckap4-202ENSMUST00000167671 Hdac1O09106 482 aaKnown RBP21.74■■□□□ 1.07
Ckap4-202ENSMUST00000167671 Nek4Q9Z1J2 792 aa21.74■■□□□ 1.07
Ckap4-202ENSMUST00000167671 Rsph3aQ3UFY4 516 aa21.73■■□□□ 1.07
Ckap4-202ENSMUST00000167671 Q4VA45 678 aa21.73■■□□□ 1.07
Ckap4-202ENSMUST00000167671 Atp2b2Q9R0K7 1198 aa21.73■■□□□ 1.07
Ckap4-202ENSMUST00000167671 Pik3r4Q8VD65 1358 aa21.73■■□□□ 1.07
Ckap4-202ENSMUST00000167671 Utp14aQ640M1 767 aaKnown RBP21.73■■□□□ 1.07
Ckap4-202ENSMUST00000167671 Q9D9H8 365 aa21.73■■□□□ 1.07
Ckap4-202ENSMUST00000167671 Tbc1d9Q3UYK3 1264 aa21.72■■□□□ 1.07
Ckap4-202ENSMUST00000167671 Aldh1l1Q8R0Y6 902 aa21.72■■□□□ 1.07
Ckap4-202ENSMUST00000167671 PaskQ8CEE6 1383 aa21.72■■□□□ 1.07
Ckap4-202ENSMUST00000167671 Wdr63B2RY71 923 aa21.72■■□□□ 1.07
Ckap4-202ENSMUST00000167671 MvpQ9EQK5 861 aa21.72■■□□□ 1.07
Ckap4-202ENSMUST00000167671 Kif20aP97329 887 aa21.71■■□□□ 1.07
Ckap4-202ENSMUST00000167671 Cep170bQ80U49 1574 aa21.71■■□□□ 1.07
Ckap4-202ENSMUST00000167671 Mroh1E0CZ22 1640 aa21.71■■□□□ 1.07
Ckap4-202ENSMUST00000167671 Plin1Q8CGN5 517 aa21.71■■□□□ 1.07
Ckap4-202ENSMUST00000167671 Vamp4O70480 141 aa21.69■■□□□ 1.06
Ckap4-202ENSMUST00000167671 Stk11ipQ3TAA7 1072 aa21.69■■□□□ 1.06
Ckap4-202ENSMUST00000167671 U2surpQ6NV83 1029 aaKnown RBP21.69■■□□□ 1.06
Ckap4-202ENSMUST00000167671 Akap12Q9WTQ5 1684 aa21.69■■□□□ 1.06
Ckap4-202ENSMUST00000167671 Uhrf1bp1B2KF50 1429 aa21.69■■□□□ 1.06
Ckap4-202ENSMUST00000167671 Ccdc146E9Q9F7 977 aa21.69■■□□□ 1.06
Ckap4-202ENSMUST00000167671 Cdc42bpgQ80UW5 1551 aa21.68■■□□□ 1.06
Ckap4-202ENSMUST00000167671 Prrc2bQ7TPM1 1486 aaKnown RBP21.68■■□□□ 1.06
Ckap4-202ENSMUST00000167671 Naip7Q9JIB3 1402 aa21.67■■□□□ 1.06
Ckap4-202ENSMUST00000167671 CarsQ9ER72 831 aaKnown RBP21.67■■□□□ 1.06
Ckap4-202ENSMUST00000167671 Knl1Q66JQ7 1612 aa21.67■■□□□ 1.06
Ckap4-202ENSMUST00000167671 Ankrd44B2RXR6 993 aa21.66■■□□□ 1.06
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms