RNA–Protein interactions for RNA: ENSMUST00000161241.7

Usf1-208, Transcript of Upstream stimulatory factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usf1, Length 2,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1-208ENSMUST00000161241 Tsen2Q6P7W5 460 aa17.14■□□□□ 0.33
Usf1-208ENSMUST00000161241 U2af1Q9D883 239 aaKnown RBP17.14■□□□□ 0.33
Usf1-208ENSMUST00000161241 Cdc42bpgQ80UW5 1551 aa17.14■□□□□ 0.33
Usf1-208ENSMUST00000161241 Apaf1O88879 1249 aa17.13■□□□□ 0.33
Usf1-208ENSMUST00000161241 Lemd3Q9WU40 921 aa17.13■□□□□ 0.33
Usf1-208ENSMUST00000161241 CenpjQ569L8 1344 aa17.13■□□□□ 0.33
Usf1-208ENSMUST00000161241 Kiaa0556Q8C753 1610 aa17.12■□□□□ 0.33
Usf1-208ENSMUST00000161241 Arid3cA6PWV5 409 aa17.12■□□□□ 0.33
Usf1-208ENSMUST00000161241 Lrrc7Q80TE7 1490 aa17.12■□□□□ 0.33
Usf1-208ENSMUST00000161241 Nrxn1Q9CS84 1514 aa17.12■□□□□ 0.33
Usf1-208ENSMUST00000161241 Pnmal2G3X9N3 661 aa17.12■□□□□ 0.33
Usf1-208ENSMUST00000161241 Terf2O35144 541 aa17.12■□□□□ 0.33
Usf1-208ENSMUST00000161241 Mfap1aC0HKD8 439 aaKnown RBP17.11■□□□□ 0.33
Usf1-208ENSMUST00000161241 Mfap1bC0HKD9 439 aaKnown RBP17.11■□□□□ 0.33
Usf1-208ENSMUST00000161241 Mcm4P49717 862 aa17.11■□□□□ 0.33
Usf1-208ENSMUST00000161241 Catsper2A2ARP9 588 aa17.11■□□□□ 0.33
Usf1-208ENSMUST00000161241 IqubQ8CDK3 788 aa17.11■□□□□ 0.33
Usf1-208ENSMUST00000161241 Rrp9Q91WM3 475 aaKnown RBP17.11■□□□□ 0.33
Usf1-208ENSMUST00000161241 Kif2cQ922S8 721 aa17.11■□□□□ 0.33
Usf1-208ENSMUST00000161241 Trim26Q99PN3 545 aa17.11■□□□□ 0.33
Usf1-208ENSMUST00000161241 Znf541Q0GGX2 1363 aa17.1■□□□□ 0.33
Usf1-208ENSMUST00000161241 Dusp27Q148W8 1138 aa17.1■□□□□ 0.33
Usf1-208ENSMUST00000161241 Pknox2Q8BG99 474 aa17.09■□□□□ 0.33
Usf1-208ENSMUST00000161241 CastP51125 788 aa17.09■□□□□ 0.33
Usf1-208ENSMUST00000161241 Isy1Q69ZQ2 285 aaKnown RBP17.09■□□□□ 0.33
Usf1-208ENSMUST00000161241 Cluap1Q8R3P7 413 aa17.09■□□□□ 0.33
Usf1-208ENSMUST00000161241 Slc52a2Q9D8F3 450 aa17.09■□□□□ 0.33
Usf1-208ENSMUST00000161241 Uhrf1bp1B2KF50 1429 aa17.08■□□□□ 0.32
Usf1-208ENSMUST00000161241 Ssh1Q76I79 1042 aa17.08■□□□□ 0.32
Usf1-208ENSMUST00000161241 Ccdc171E9Q1U1 1324 aa17.07■□□□□ 0.32
Usf1-208ENSMUST00000161241 Rbm25B2RY56 838 aaKnown RBP17.07■□□□□ 0.32
Usf1-208ENSMUST00000161241 AU019823E9PUQ3 292 aa17.07■□□□□ 0.32
Usf1-208ENSMUST00000161241 Kif18aQ91WD7 886 aa17.07■□□□□ 0.32
Usf1-208ENSMUST00000161241 Ppp1r3fQ9JIG4 799 aa17.07■□□□□ 0.32
Usf1-208ENSMUST00000161241 Ttc21aQ8C0S4 1314 aa17.07■□□□□ 0.32
Usf1-208ENSMUST00000161241 SkilQ60665 675 aa17.06■□□□□ 0.32
Usf1-208ENSMUST00000161241 KnstrnQ9D9Z1 312 aaKnown RBP17.06■□□□□ 0.32
Usf1-208ENSMUST00000161241 AU022751B1B0V2 589 aa17.06■□□□□ 0.32
Usf1-208ENSMUST00000161241 FanciQ8K368 1330 aa17.06■□□□□ 0.32
Usf1-208ENSMUST00000161241 PaskQ8CEE6 1383 aa17.06■□□□□ 0.32
Usf1-208ENSMUST00000161241 Ncapd2Q8K2Z4 1392 aa17.06■□□□□ 0.32
Usf1-208ENSMUST00000161241 Spryd3E9Q9B3 442 aa17.05■□□□□ 0.32
Usf1-208ENSMUST00000161241 Cavin4A2AMM0 362 aa17.04■□□□□ 0.32
Usf1-208ENSMUST00000161241 Ankrd50F7BE84 1390 aa17.04■□□□□ 0.32
Usf1-208ENSMUST00000161241 Gm10093D3YYI8 482 aa17.04■□□□□ 0.32
Usf1-208ENSMUST00000161241 Hdac1O09106 482 aaKnown RBP17.04■□□□□ 0.32
Usf1-208ENSMUST00000161241 Brd1E9PZ26 1189 aaKnown RBP17.03■□□□□ 0.32
Usf1-208ENSMUST00000161241 Maco1Q7TQE6 664 aaKnown RBP17.03■□□□□ 0.32
Usf1-208ENSMUST00000161241 Usp32F8VPZ3 1604 aa17.02■□□□□ 0.32
Usf1-208ENSMUST00000161241 Mroh1E0CZ22 1640 aa17.02■□□□□ 0.31
Usf1-208ENSMUST00000161241 Wwc1Q5SXA9 1104 aa17.02■□□□□ 0.31
Usf1-208ENSMUST00000161241 Gli2Q0VGT2 1544 aa17.01■□□□□ 0.31
Usf1-208ENSMUST00000161241 Rsph3aQ3UFY4 516 aa17.01■□□□□ 0.31
Usf1-208ENSMUST00000161241 Ccdc60Q8C4J0 545 aa17■□□□□ 0.31
Usf1-208ENSMUST00000161241 Pik3r4Q8VD65 1358 aa17■□□□□ 0.31
Usf1-208ENSMUST00000161241 Cog6Q8R3I3 657 aa16.99■□□□□ 0.31
Usf1-208ENSMUST00000161241 OvosQ3UU35 1456 aa16.99■□□□□ 0.31
Usf1-208ENSMUST00000161241 G3bp1P97855 465 aaKnown RBP16.99■□□□□ 0.31
Usf1-208ENSMUST00000161241 Cetn4Q8K4K1 168 aa16.99■□□□□ 0.31
Usf1-208ENSMUST00000161241 Exosc9Q9JHI7 438 aaKnown RBP16.99■□□□□ 0.31
Usf1-208ENSMUST00000161241 Chmp4bQ9D8B3 224 aaKnown RBP16.98■□□□□ 0.31
Usf1-208ENSMUST00000161241 Atp10aO54827 1508 aa16.98■□□□□ 0.31
Usf1-208ENSMUST00000161241 Naip7Q9JIB3 1402 aa16.98■□□□□ 0.31
Usf1-208ENSMUST00000161241 Plcb2A3KGF7 1181 aa16.98■□□□□ 0.31
Usf1-208ENSMUST00000161241 Il4rP16382 810 aa16.98■□□□□ 0.31
Usf1-208ENSMUST00000161241 Ddit3P35639 168 aa16.98■□□□□ 0.31
Usf1-208ENSMUST00000161241 AdgbG3UZ78 1657 aa16.97■□□□□ 0.31
Usf1-208ENSMUST00000161241 Fchsd2Q3USJ8 740 aa16.97■□□□□ 0.31
Usf1-208ENSMUST00000161241 Atp7bQ64446 1462 aa16.97■□□□□ 0.31
Usf1-208ENSMUST00000161241 CltcQ68FD5 1675 aaKnown RBP16.97■□□□□ 0.31
Usf1-208ENSMUST00000161241 Kdm4cQ8VCD7 1054 aa16.96■□□□□ 0.31
Usf1-208ENSMUST00000161241 Arhgap23Q69ZH9 1483 aa16.94■□□□□ 0.3
Usf1-208ENSMUST00000161241 LifrP42703 1092 aa16.94■□□□□ 0.3
Usf1-208ENSMUST00000161241 Swt1Q9DBQ9 907 aa16.94■□□□□ 0.3
Usf1-208ENSMUST00000161241 Znf330Q922H9 316 aa16.94■□□□□ 0.3
Usf1-208ENSMUST00000161241 Nsfl1cQ9CZ44 370 aaKnown RBP16.94■□□□□ 0.3
Usf1-208ENSMUST00000161241 Aldh1l1Q8R0Y6 902 aa16.93■□□□□ 0.3
Usf1-208ENSMUST00000161241 MvpQ9EQK5 861 aa16.93■□□□□ 0.3
Usf1-208ENSMUST00000161241 Wdr63B2RY71 923 aa16.92■□□□□ 0.3
Usf1-208ENSMUST00000161241 Rrp12Q6P5B0 1295 aaKnown RBP16.92■□□□□ 0.3
Usf1-208ENSMUST00000161241 Knl1Q66JQ7 1612 aa16.92■□□□□ 0.3
Usf1-208ENSMUST00000161241 Rfx1P48377 963 aa16.91■□□□□ 0.3
Usf1-208ENSMUST00000161241 Paxip1Q6NZQ4 1056 aa16.91■□□□□ 0.3
Usf1-208ENSMUST00000161241 Adamts7Q68SA9 1657 aa16.9■□□□□ 0.3
Usf1-208ENSMUST00000161241 Q3UPC7 1272 aa16.9■□□□□ 0.3
Usf1-208ENSMUST00000161241 Q4VA45 678 aa16.89■□□□□ 0.3
Usf1-208ENSMUST00000161241 Plekhm2Q80TQ5 1018 aa16.89■□□□□ 0.3
Usf1-208ENSMUST00000161241 Nsd3Q6P2L6 1439 aa16.89■□□□□ 0.3
Usf1-208ENSMUST00000161241 AglF8VPN4 1532 aa16.89■□□□□ 0.3
Usf1-208ENSMUST00000161241 Ankrd44B2RXR6 993 aa16.89■□□□□ 0.29
Usf1-208ENSMUST00000161241 Cgnl1Q6AW69 1298 aa16.89■□□□□ 0.29
Usf1-208ENSMUST00000161241 Gsto1O09131 240 aa16.88■□□□□ 0.29
Usf1-208ENSMUST00000161241 Tbc1d9Q3UYK3 1264 aa16.88■□□□□ 0.29
Usf1-208ENSMUST00000161241 1700010I14RikQ7TPG0 532 aa16.88■□□□□ 0.29
Usf1-208ENSMUST00000161241 Trim44Q9QXA7 346 aa16.88■□□□□ 0.29
Usf1-208ENSMUST00000161241 Trim28Q62318 834 aa16.87■□□□□ 0.29
Usf1-208ENSMUST00000161241 Ddrgk1Q80WW9 315 aa16.87■□□□□ 0.29
Usf1-208ENSMUST00000161241 Arhgef28P97433 1693 aa16.86■□□□□ 0.29
Usf1-208ENSMUST00000161241 Vamp4O70480 141 aa16.86■□□□□ 0.29
Usf1-208ENSMUST00000161241 Nutm1Q8BHP2 1126 aa16.86■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 67.8 ms