RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 TimelessQ9R1X4 1197 aa21.75■■□□□ 1.07
Hmgb1-208ENSMUST00000139443 Eno4Q8C042 619 aa21.74■■□□□ 1.07
Hmgb1-208ENSMUST00000139443 CatipB9EKE5 520 aa21.72■■□□□ 1.07
Hmgb1-208ENSMUST00000139443 Cdhr2E9Q7P9 1308 aa21.72■■□□□ 1.07
Hmgb1-208ENSMUST00000139443 Sbno1Q689Z5 1390 aa21.71■■□□□ 1.07
Hmgb1-208ENSMUST00000139443 Zmym3Q9JLM4 1370 aa21.71■■□□□ 1.07
Hmgb1-208ENSMUST00000139443 MpndQ3TV65 487 aa21.69■■□□□ 1.06
Hmgb1-208ENSMUST00000139443 InsrP15208 1372 aa21.69■■□□□ 1.06
Hmgb1-208ENSMUST00000139443 PaskQ8CEE6 1383 aa21.69■■□□□ 1.06
Hmgb1-208ENSMUST00000139443 Gimap6Q8K349 305 aa21.68■■□□□ 1.06
Hmgb1-208ENSMUST00000139443 Map3k19E9Q3S4 1311 aa21.68■■□□□ 1.06
Hmgb1-208ENSMUST00000139443 Pola1P33609 1465 aa21.67■■□□□ 1.06
Hmgb1-208ENSMUST00000139443 Frmpd2A0A140LI67 1392 aa21.67■■□□□ 1.06
Hmgb1-208ENSMUST00000139443 Sf3b2Q3UJB0 878 aaKnown RBP21.67■■□□□ 1.06
Hmgb1-208ENSMUST00000139443 Rtl5Q5DTT4 599 aa21.67■■□□□ 1.06
Hmgb1-208ENSMUST00000139443 Dzip1Q8BMD2 852 aa21.67■■□□□ 1.06
Hmgb1-208ENSMUST00000139443 Psrc1Q9D0P7 329 aa21.67■■□□□ 1.06
Hmgb1-208ENSMUST00000139443 Nfat5Q9WV30 1534 aa21.66■■□□□ 1.06
Hmgb1-208ENSMUST00000139443 Col16a1Q8BLX7 1580 aa21.65■■□□□ 1.06
Hmgb1-208ENSMUST00000139443 Txnrd1Q9JMH6 613 aa21.65■■□□□ 1.06
Hmgb1-208ENSMUST00000139443 Znf335A2A5K6 1337 aa21.63■■□□□ 1.05
Hmgb1-208ENSMUST00000139443 Rpgrip1Q9EPQ2 1331 aa21.63■■□□□ 1.05
Hmgb1-208ENSMUST00000139443 Bcl9lQ67FY2 1494 aa21.63■■□□□ 1.05
Hmgb1-208ENSMUST00000139443 Nid2O88322 1403 aa21.63■■□□□ 1.05
Hmgb1-208ENSMUST00000139443 Tet3Q8BG87 1668 aa21.62■■□□□ 1.05
Hmgb1-208ENSMUST00000139443 Cnga1P29974 684 aa21.61■■□□□ 1.05
Hmgb1-208ENSMUST00000139443 Tnrc6cQ3UHC0 1690 aaKnown RBP21.6■■□□□ 1.05
Hmgb1-208ENSMUST00000139443 Gm21698A0A087WQP8 267 aa21.59■■□□□ 1.05
Hmgb1-208ENSMUST00000139443 Gm21671G3UY31 267 aa21.59■■□□□ 1.05
Hmgb1-208ENSMUST00000139443 Shank2Q80Z38 1476 aa21.58■■□□□ 1.05
Hmgb1-208ENSMUST00000139443 Sgsm1Q8BPQ7 1093 aa21.58■■□□□ 1.05
Hmgb1-208ENSMUST00000139443 TonslQ6NZL6 1363 aa21.57■■□□□ 1.04
Hmgb1-208ENSMUST00000139443 Ncapd2Q8K2Z4 1392 aa21.56■■□□□ 1.04
Hmgb1-208ENSMUST00000139443 Kif16bB1AVY7 1312 aa21.55■■□□□ 1.04
Hmgb1-208ENSMUST00000139443 Gm21190A0A0G2JGJ6 266 aa21.54■■□□□ 1.04
Hmgb1-208ENSMUST00000139443 Ncoa4Q5U4H9 625 aa21.54■■□□□ 1.04
Hmgb1-208ENSMUST00000139443 Col22a1E9Q7P1 1613 aa21.53■■□□□ 1.04
Hmgb1-208ENSMUST00000139443 Dennd6aQ8BH65 605 aa21.5■■□□□ 1.03
Hmgb1-208ENSMUST00000139443 Rgs17Q9QZB0 210 aa21.5■■□□□ 1.03
Hmgb1-208ENSMUST00000139443 Zeb2Q9R0G7 1215 aa21.5■■□□□ 1.03
Hmgb1-208ENSMUST00000139443 Cacna1sQ02789 1880 aa21.49■■□□□ 1.03
Hmgb1-208ENSMUST00000139443 Kcnh5Q920E3 988 aa21.49■■□□□ 1.03
Hmgb1-208ENSMUST00000139443 Ltbp1Q8CG19 1712 aa21.48■■□□□ 1.03
Hmgb1-208ENSMUST00000139443 Pard3Q99NH2 1333 aa21.48■■□□□ 1.03
Hmgb1-208ENSMUST00000139443 NefmP08553 848 aa21.47■■□□□ 1.03
Hmgb1-208ENSMUST00000139443 Ccdc129Q14B48 1034 aa21.47■■□□□ 1.03
Hmgb1-208ENSMUST00000139443 Sugp2Q8CH09 1067 aa21.47■■□□□ 1.03
Hmgb1-208ENSMUST00000139443 Ppargc1bQ8VHJ7 1014 aa21.47■■□□□ 1.03
Hmgb1-208ENSMUST00000139443 Astn2Q80Z10 1352 aa21.46■■□□□ 1.03
Hmgb1-208ENSMUST00000139443 Card10P58660 1021 aa21.45■■□□□ 1.02
Hmgb1-208ENSMUST00000139443 Pm20d1Q8C165 503 aa21.45■■□□□ 1.02
Hmgb1-208ENSMUST00000139443 Tnks1bp1P58871 1720 aa21.44■■□□□ 1.02
Hmgb1-208ENSMUST00000139443 Slx1bQ8BX32 270 aa21.44■■□□□ 1.02
Hmgb1-208ENSMUST00000139443 Fmnl2A2APV2 1086 aa21.43■■□□□ 1.02
Hmgb1-208ENSMUST00000139443 Cabp4Q8VHC5 271 aa21.43■■□□□ 1.02
Hmgb1-208ENSMUST00000139443 Slc24a1Q91WD8 1130 aa21.43■■□□□ 1.02
Hmgb1-208ENSMUST00000139443 Cwc22Q8C5N3 908 aaKnown RBP21.42■■□□□ 1.02
Hmgb1-208ENSMUST00000139443 Nlgn1Q99K10 843 aa21.42■■□□□ 1.02
Hmgb1-208ENSMUST00000139443 TnrQ8BYI9 1358 aa21.41■■□□□ 1.02
Hmgb1-208ENSMUST00000139443 Amotl2Q8K371 772 aa21.41■■□□□ 1.02
Hmgb1-208ENSMUST00000139443 TatQ8QZR1 454 aa21.41■■□□□ 1.02
Hmgb1-208ENSMUST00000139443 Kdm2bQ6P1G2 1309 aa21.39■■□□□ 1.01
Hmgb1-208ENSMUST00000139443 Dnajc10Q9DC23 793 aa21.39■■□□□ 1.01
Hmgb1-208ENSMUST00000139443 Cdk12Q14AX6 1484 aaKnown RBP21.39■■□□□ 1.01
Hmgb1-208ENSMUST00000139443 Ccdc6D3YZP9 469 aa21.38■■□□□ 1.01
Hmgb1-208ENSMUST00000139443 Prdm10Q3UTQ7 1184 aa21.38■■□□□ 1.01
Hmgb1-208ENSMUST00000139443 Fer1l6E0CZ42 1862 aa21.38■■□□□ 1.01
Hmgb1-208ENSMUST00000139443 Chd4Q6PDQ2 1915 aaKnown RBP21.37■■□□□ 1.01
Hmgb1-208ENSMUST00000139443 Kat6bQ8BRB7 1872 aa21.37■■□□□ 1.01
Hmgb1-208ENSMUST00000139443 Nckap5lQ6GQX2 1323 aa21.37■■□□□ 1.01
Hmgb1-208ENSMUST00000139443 Ubap1lG3UW59 384 aa21.37■■□□□ 1.01
Hmgb1-208ENSMUST00000139443 Kiaa0319Q5SZV5 1081 aa21.37■■□□□ 1.01
Hmgb1-208ENSMUST00000139443 Taok3Q8BYC6 898 aa21.36■■□□□ 1.01
Hmgb1-208ENSMUST00000139443 Nup153E9Q3G8 1462 aaKnown RBP21.35■■□□□ 1.01
Hmgb1-208ENSMUST00000139443 Slc4a1apE9PX68 744 aa21.35■■□□□ 1.01
Hmgb1-208ENSMUST00000139443 Scaf1Q5U4C3 1256 aaKnown RBP21.34■■□□□ 1.01
Hmgb1-208ENSMUST00000139443 Nol11Q8BJW5 723 aaKnown RBP21.34■■□□□ 1.01
Hmgb1-208ENSMUST00000139443 Mdc1Q5PSV9 1707 aa21.33■■□□□ 1.01
Hmgb1-208ENSMUST00000139443 CemipQ8BI06 1361 aa21.32■■□□□ 1
Hmgb1-208ENSMUST00000139443 Ano8Q6PB70 1060 aa21.31■■□□□ 1
Hmgb1-208ENSMUST00000139443 Ly75Q60767 1723 aa21.31■■□□□ 1
Hmgb1-208ENSMUST00000139443 Ubr1O70481 1757 aa21.31■■□□□ 1
Hmgb1-208ENSMUST00000139443 Mast2Q60592 1734 aa21.3■■□□□ 1
Hmgb1-208ENSMUST00000139443 Ppp6r1Q7TSI3 856 aa21.3■■□□□ 1
Hmgb1-208ENSMUST00000139443 FancaQ9JL70 1439 aa21.29■■□□□ 1
Hmgb1-208ENSMUST00000139443 Scn7aB1AYL1 1681 aa21.29■■□□□ 1
Hmgb1-208ENSMUST00000139443 Pak3Q61036 559 aa21.29■■□□□ 1
Hmgb1-208ENSMUST00000139443 Adamtsl1Q8BLI0 1745 aa21.29■■□□□ 1
Hmgb1-208ENSMUST00000139443 RgmbQ7TQ33 436 aa21.27■■□□□ 1
Hmgb1-208ENSMUST00000139443 Plekhd1B2RPU2 505 aa21.26■□□□□ 0.99
Hmgb1-208ENSMUST00000139443 Ildr2B5TVM2 661 aa21.26■□□□□ 0.99
Hmgb1-208ENSMUST00000139443 Fam184bQ0KK56 942 aa21.26■□□□□ 0.99
Hmgb1-208ENSMUST00000139443 Map2P20357 1828 aa21.26■□□□□ 0.99
Hmgb1-208ENSMUST00000139443 Akap11E9Q777 1895 aa21.26■□□□□ 0.99
Hmgb1-208ENSMUST00000139443 Vps33bP59016 617 aa21.24■□□□□ 0.99
Hmgb1-208ENSMUST00000139443 OscarQ8VBT3 265 aa21.24■□□□□ 0.99
Hmgb1-208ENSMUST00000139443 Robo1O89026 1612 aa21.24■□□□□ 0.99
Hmgb1-208ENSMUST00000139443 Uhrf1bp1lA2RSJ4 1457 aa21.24■□□□□ 0.99
Hmgb1-208ENSMUST00000139443 Tmf1B9EKI3 1091 aa21.23■□□□□ 0.99
Hmgb1-208ENSMUST00000139443 Birc3O08863 600 aa21.23■□□□□ 0.99
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms