RNA–Protein interactions for RNA: ENSMUST00000119954.8

Pcf11-201, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcf11, Length 5,995 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-201ENSMUST00000119954 CenpqQ9CPQ5 267 aa20.81■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Ccdc88bQ4QRL3 1481 aa20.81■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Swt1Q9DBQ9 907 aa20.81■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Lamb3Q61087 1168 aa20.81■□□□□ 0.92
Pcf11-201ENSMUST00000119954 MicalclQ9D5U9 680 aa20.81■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Ssh1Q76I79 1042 aa20.8■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Nutm1Q8BHP2 1126 aa20.8■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Rpgrip1lQ8CG73 1264 aa20.8■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Odf2lQ9D478 642 aa20.8■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Ddx54Q8K4L0 874 aaKnown RBP20.8■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Abcd1P48410 736 aa20.79■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Secisbp2lQ6A098 1086 aaKnown RBP20.79■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Cnnm3Q32NY4 713 aa20.79■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Pmfbp1Q9WVQ0 1022 aa20.79■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Fam184aE9PW83 1143 aa20.79■□□□□ 0.92
Pcf11-201ENSMUST00000119954 ArsiQ32KI9 573 aa20.79■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Znf710Q3U288 666 aa20.79■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Dapk1Q80YE7 1442 aa20.78■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Larp1Q6ZQ58 1072 aaKnown RBP20.78■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Sv2bQ8BG39 683 aa20.78■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Tubb6Q922F4 447 aa20.78■□□□□ 0.92
Pcf11-201ENSMUST00000119954 NcapgE9PWG6 1004 aa20.78■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Mctp1E9PV86 951 aa20.77■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Dnaaf4Q8R368 420 aa20.77■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Tmc1Q8R4P5 757 aa20.77■□□□□ 0.92
Pcf11-201ENSMUST00000119954 Hs1bp3Q3TC93 395 aa20.76■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Stim1P70302 685 aa20.76■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Krt85Q9Z2T6 507 aa20.76■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Gm42641I6L9G2 585 aa20.76■□□□□ 0.91
Pcf11-201ENSMUST00000119954 AtripQ8BMG1 785 aa20.76■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Ccdc171E9Q1U1 1324 aa20.76■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Lrrc45Q8CIM1 670 aa20.76■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Fmn1Q05860 1466 aa20.75■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Eif5P59325 429 aaKnown RBP20.75■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Cbx1P83917 185 aaKnown RBP20.75■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Gm10471E9Q1C7 252 aa20.75■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Prpf4bQ61136 1007 aaKnown RBP20.75■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Med4Q9CQA5 270 aa20.74■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Rad54l2Q99NG0 1466 aa20.74■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Themis2Q91YX0 663 aa20.74■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Pafah1b1P63005 410 aaKnown RBP20.74■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Ttll5Q8CHB8 1328 aa20.74■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Jakmip2D3YXK0 820 aa20.73■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Gsdma3Q5Y4Y6 464 aa20.73■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Smg7Q5RJH6 1138 aaKnown RBP20.72■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Sptbn5F6UCX4 1208 aa20.72■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Ercc6lQ8BHK9 1240 aa20.72■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Mipol1Q9D9F8 279 aa20.72■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Ccnb3Q810T2 1396 aa20.72■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Agtpbp1Q641K1 1218 aa20.72■□□□□ 0.91
Pcf11-201ENSMUST00000119954 TxlnaQ6PAM1 554 aaKnown RBP20.72■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Gcc1Q9D4H2 778 aa20.71■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Cfap58B2RW38 873 aa20.71■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Slu7Q8BHJ9 585 aa20.71■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Gnl2Q99LH1 728 aaKnown RBP20.71■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Erc1Q99MI1 1120 aa20.71■□□□□ 0.91
Pcf11-201ENSMUST00000119954 Evi5lH3BKQ3 813 aa20.7■□□□□ 0.9
Pcf11-201ENSMUST00000119954 Znf692Q3U381 531 aa20.7■□□□□ 0.9
Pcf11-201ENSMUST00000119954 Pabpn1Q8CCS6 302 aaKnown RBP20.7■□□□□ 0.9
Pcf11-201ENSMUST00000119954 Nup88Q8CEC0 753 aaKnown RBP20.7■□□□□ 0.9
Pcf11-201ENSMUST00000119954 Mphosph10Q810V0 681 aaKnown RBP20.69■□□□□ 0.9
Pcf11-201ENSMUST00000119954 Cfap45Q9D9U9 551 aa20.69■□□□□ 0.9
Pcf11-201ENSMUST00000119954 Zranb3Q6NZP1 1069 aa20.68■□□□□ 0.9
Pcf11-201ENSMUST00000119954 IncenpQ9WU62 880 aa20.68■□□□□ 0.9
Pcf11-201ENSMUST00000119954 Plagl1Q9JLQ4 704 aa20.68■□□□□ 0.9
Pcf11-201ENSMUST00000119954 ClasrpQ8CFC7 668 aa20.68■□□□□ 0.9
Pcf11-201ENSMUST00000119954 Tspyl3Q3UYP3 334 aa20.68■□□□□ 0.9
Pcf11-201ENSMUST00000119954 Cdca7Q9D0M2 382 aa20.67■□□□□ 0.9
Pcf11-201ENSMUST00000119954 Cavin1O54724 392 aa20.67■□□□□ 0.9
Pcf11-201ENSMUST00000119954 Spata24Q6P926 205 aa20.67■□□□□ 0.9
Pcf11-201ENSMUST00000119954 TatQ8QZR1 454 aa20.67■□□□□ 0.9
Pcf11-201ENSMUST00000119954 Ell2Q3UKU1 639 aa20.66■□□□□ 0.9
Pcf11-201ENSMUST00000119954 Dydc1Q9D9T0 175 aa20.66■□□□□ 0.9
Pcf11-201ENSMUST00000119954 Map2k1P31938 393 aa20.66■□□□□ 0.9
Pcf11-201ENSMUST00000119954 PnisrA2AJT4 805 aaKnown RBP20.65■□□□□ 0.9
Pcf11-201ENSMUST00000119954 Trim25Q61510 634 aaKnown RBP20.65■□□□□ 0.9
Pcf11-201ENSMUST00000119954 Kcnh8P59111 1102 aa20.65■□□□□ 0.9
Pcf11-201ENSMUST00000119954 Adck5Q80V03 582 aa20.65■□□□□ 0.9
Pcf11-201ENSMUST00000119954 Jakmip1Q8BVL9 626 aa20.65■□□□□ 0.9
Pcf11-201ENSMUST00000119954 Nphp1Q9QY53 687 aa20.65■□□□□ 0.9
Pcf11-201ENSMUST00000119954 Shroom4Q1W617 1475 aa20.65■□□□□ 0.9
Pcf11-201ENSMUST00000119954 DmtnQ9WV69 405 aa20.65■□□□□ 0.9
Pcf11-201ENSMUST00000119954 Cep57l1Q8VDS7 400 aa20.65■□□□□ 0.9
Pcf11-201ENSMUST00000119954 Sel1lQ9Z2G6 790 aa20.65■□□□□ 0.9
Pcf11-201ENSMUST00000119954 Kdm4aQ8BW72 1064 aa20.64■□□□□ 0.9
Pcf11-201ENSMUST00000119954 Syce3B5KM66 88 aa20.64■□□□□ 0.89
Pcf11-201ENSMUST00000119954 Cog6Q8R3I3 657 aa20.64■□□□□ 0.89
Pcf11-201ENSMUST00000119954 Ccdc191J3QQ27 883 aa20.63■□□□□ 0.89
Pcf11-201ENSMUST00000119954 Exoc8Q6PGF7 716 aa20.63■□□□□ 0.89
Pcf11-201ENSMUST00000119954 Samm50Q8BGH2 469 aa20.63■□□□□ 0.89
Pcf11-201ENSMUST00000119954 Gm18336A0A140LIU8 765 aa20.63■□□□□ 0.89
Pcf11-201ENSMUST00000119954 Cdc45Q9Z1X9 566 aa20.63■□□□□ 0.89
Pcf11-201ENSMUST00000119954 Gnai2P08752 355 aaKnown RBP20.62■□□□□ 0.89
Pcf11-201ENSMUST00000119954 Arhgef18Q6P9R4 1021 aa20.62■□□□□ 0.89
Pcf11-201ENSMUST00000119954 Gnl3lQ6PGG6 577 aaKnown RBP20.62■□□□□ 0.89
Pcf11-201ENSMUST00000119954 Anapc15-psA0A140T8L6 141 aa20.62■□□□□ 0.89
Pcf11-201ENSMUST00000119954 Kcnj4P52189 445 aa20.62■□□□□ 0.89
Pcf11-201ENSMUST00000119954 Ppp6r1Q7TSI3 856 aa20.62■□□□□ 0.89
Pcf11-201ENSMUST00000119954 Cnnm1Q0GA42 951 aa20.62■□□□□ 0.89
Pcf11-201ENSMUST00000119954 Tax1bp1Q3UKC1 814 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 22,080 RNA–protein pairs in 10.8 ms