RNA–Protein interactions for RNA: ENSMUST00000112070.7

Col7a1-202, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col7a1, Length 9,250 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-202ENSMUST00000112070 Pds5bQ4VA53 1446 aaKnown RBP16.63■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Rhot2Q8JZN7 620 aa16.63■□□□□ 0.25
Col7a1-202ENSMUST00000112070 CenphQ9QYM8 241 aa16.62■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Smc1aQ9CU62 1233 aaKnown RBP16.62■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Pafah1b1P63005 410 aaKnown RBP16.62■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Cfap58B2RW38 873 aa16.62■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Hmox1P14901 289 aa16.62■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Mex3cQ05A36 652 aaKnown RBP16.62■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Pdcl2Q78Y63 240 aa16.62■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Kdm5dQ62240 1548 aa16.62■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Krt85Q9Z2T6 507 aa16.62■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Dapk1Q80YE7 1442 aa16.61■□□□□ 0.25
Col7a1-202ENSMUST00000112070 CastP51125 788 aa16.61■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Ncbp1Q3UYV9 790 aaKnown RBP16.61■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Fam184bQ0KK56 942 aa16.61■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Ric3Q8BPM6 367 aa16.61■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Ppp2r3aB2RXC8 1150 aa16.61■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Dydc1Q9D9T0 175 aa16.61■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Triml2E9PW10 424 aa16.61■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Wasf1Q8R5H6 559 aa16.61■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Gbp8Q2V6D6 525 aa16.6■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Gm7361D3Z6R1 267 aa16.6■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Fam107bQ3TGF2 131 aa16.6■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Znf526Q8BI66 675 aa16.6■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Wdr63B2RY71 923 aa16.59■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Tspyl3Q3UYP3 334 aa16.59■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Sv2bQ8BG39 683 aa16.59■□□□□ 0.25
Col7a1-202ENSMUST00000112070 4921504E06RikQ8CET2 560 aa16.59■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Q9D9S1 216 aa16.59■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Samd1D3YXK1 519 aa16.59■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Plcd4Q8K3R3 807 aa16.59■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Washc2Q6PGL7 1334 aa16.59■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Gm18336A0A140LIU8 765 aa16.59■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Trim30cD3YVI9 513 aa16.58■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Utp14aQ640M1 767 aaKnown RBP16.58■□□□□ 0.25
Col7a1-202ENSMUST00000112070 Plekhd1B2RPU2 505 aa16.58■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Rnf187Q8BFX1 236 aa16.58■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Nol7Q9D7Z3 254 aaKnown RBP16.58■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Cabp1Q9JLK7 227 aa16.58■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Homer1Q9Z2Y3 366 aa16.58■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Cep57l1Q8VDS7 400 aa16.58■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Rnf214Q8BFU3 668 aaKnown RBP16.57■□□□□ 0.24
Col7a1-202ENSMUST00000112070 NinlQ6ZQ12 1394 aa16.57■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Gm10471E9Q1C7 252 aa16.57■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Znf710Q3U288 666 aa16.57■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Fmnl2A2APV2 1086 aa16.57■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Gigyf2Q6Y7W8 1291 aaKnown RBP16.57■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Shtn1Q8K2Q9 631 aa16.57■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Slu7Q8BHJ9 585 aa16.57■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Fan1Q69ZT1 1020 aa16.57■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Ctage5Q8R311 779 aa16.57■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Lamb3Q61087 1168 aa16.56■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Tubb4bP68372 445 aaKnown RBP16.56■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Ccdc88bQ4QRL3 1481 aa16.56■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Hmgb2P30681 210 aaKnown RBP16.56■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Smc1bQ920F6 1248 aa16.56■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Gbp1Q01514 589 aa16.56■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Sel1lQ9Z2G6 790 aa16.56■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Ift57Q8BXG3 429 aa16.56■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Naa15Q80UM3 865 aaKnown RBP16.56■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Swt1Q9DBQ9 907 aa16.56■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Agtpbp1Q641K1 1218 aa16.55■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Nsd2Q8BVE8 1365 aa16.55■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Cfap57Q9D180 1249 aa16.55■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Olr1Q9EQ09 363 aa16.55■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Gm42641I6L9G2 585 aa16.55■□□□□ 0.24
Col7a1-202ENSMUST00000112070 AtripQ8BMG1 785 aa16.55■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Ehbp1Q69ZW3 1231 aa16.55■□□□□ 0.24
Col7a1-202ENSMUST00000112070 ScribQ80U72 1612 aa16.55■□□□□ 0.24
Col7a1-202ENSMUST00000112070 KarsQ99MN1 595 aaKnown RBP16.55■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Lrrfip2Q91WK0 415 aa16.54■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Cdc45Q9Z1X9 566 aa16.54■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Ncapg2Q6DFV1 1138 aa16.54■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Usp16Q99LG0 825 aa16.54■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Sin3aQ60520 1274 aaKnown RBP16.54■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Prpf4bQ61136 1007 aaKnown RBP16.54■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Cdr1E9Q0B4 517 aa16.54■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Hmgb1P63158 215 aaKnown RBP16.54■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Krt84Q99M73 603 aa16.54■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Kif3bQ61771 747 aa16.53■□□□□ 0.24
Col7a1-202ENSMUST00000112070 TbcaP48428 108 aaKnown RBP16.53■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Ccdc30Q8BVF4 654 aa16.53■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Wdr33Q8K4P0 1330 aaKnown RBP16.53■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Abcf1Q6P542 837 aaKnown RBP16.52■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Eif5P59325 429 aaKnown RBP16.52■□□□□ 0.24
Col7a1-202ENSMUST00000112070 ErbinQ80TH2 1402 aa16.52■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Carmil1Q6EDY6 1374 aa16.52■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Cc2d2aQ8CFW7 1633 aa16.52■□□□□ 0.24
Col7a1-202ENSMUST00000112070 Gsto1O09131 240 aa16.52■□□□□ 0.23
Col7a1-202ENSMUST00000112070 Ppp6r1Q7TSI3 856 aa16.52■□□□□ 0.23
Col7a1-202ENSMUST00000112070 Smarca2Q6DIC0 1577 aa16.52■□□□□ 0.23
Col7a1-202ENSMUST00000112070 Ctr9Q62018 1173 aaKnown RBP16.52■□□□□ 0.23
Col7a1-202ENSMUST00000112070 Skor1Q8BX46 964 aa16.52■□□□□ 0.23
Col7a1-202ENSMUST00000112070 Luzp1Q8R4U7 1068 aaKnown RBP16.52■□□□□ 0.23
Col7a1-202ENSMUST00000112070 Nek4Q9Z1J2 792 aa16.52■□□□□ 0.23
Col7a1-202ENSMUST00000112070 Fbf1A2A870 1173 aa16.51■□□□□ 0.23
Col7a1-202ENSMUST00000112070 Bbof1Q3V079 533 aa16.51■□□□□ 0.23
Col7a1-202ENSMUST00000112070 Brms1Q99N20 246 aa16.51■□□□□ 0.23
Col7a1-202ENSMUST00000112070 Zscan10Q3URR7 782 aa16.51■□□□□ 0.23
Col7a1-202ENSMUST00000112070 Jakmip3Q5DTN8 844 aa16.51■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms