RNA–Protein interactions for RNA: ENSMUST00000110522.9

Trim9-202, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-202ENSMUST00000110522 Cwc27Q3TKY6 469 aa13.77□□□□□ -0.21
Trim9-202ENSMUST00000110522 Nol12Q8BG17 217 aa13.77□□□□□ -0.21
Trim9-202ENSMUST00000110522 NinlQ6ZQ12 1394 aa13.77□□□□□ -0.21
Trim9-202ENSMUST00000110522 Cnnm1Q0GA42 951 aa13.76□□□□□ -0.21
Trim9-202ENSMUST00000110522 St18Q80TY4 1045 aa13.76□□□□□ -0.21
Trim9-202ENSMUST00000110522 CatipB9EKE5 520 aa13.76□□□□□ -0.21
Trim9-202ENSMUST00000110522 BcanQ61361 883 aa13.76□□□□□ -0.21
Trim9-202ENSMUST00000110522 Liat1Q810M6 228 aa13.76□□□□□ -0.21
Trim9-202ENSMUST00000110522 Smc5Q8CG46 1101 aaKnown RBP13.76□□□□□ -0.21
Trim9-202ENSMUST00000110522 Gnai2P08752 355 aaKnown RBP13.76□□□□□ -0.21
Trim9-202ENSMUST00000110522 Smc4Q8CG47 1286 aa13.76□□□□□ -0.21
Trim9-202ENSMUST00000110522 Adamts12Q811B3 1600 aa13.76□□□□□ -0.21
Trim9-202ENSMUST00000110522 Lrrc9Q8CDN9 1456 aa13.75□□□□□ -0.21
Trim9-202ENSMUST00000110522 Adgrl2Q8JZZ7 1487 aa13.75□□□□□ -0.21
Trim9-202ENSMUST00000110522 Q3UPC7 1272 aa13.74□□□□□ -0.21
Trim9-202ENSMUST00000110522 Exoc6bA6H5Z3 810 aa13.74□□□□□ -0.21
Trim9-202ENSMUST00000110522 Nphp1Q9QY53 687 aa13.74□□□□□ -0.21
Trim9-202ENSMUST00000110522 Gprasp1Q5U4C1 1347 aa13.74□□□□□ -0.21
Trim9-202ENSMUST00000110522 Zpr1Q62384 459 aa13.74□□□□□ -0.21
Trim9-202ENSMUST00000110522 GnpatP98192 678 aa13.74□□□□□ -0.21
Trim9-202ENSMUST00000110522 Aldh1l1Q8R0Y6 902 aa13.74□□□□□ -0.21
Trim9-202ENSMUST00000110522 Srgap3Q812A2 1099 aa13.73□□□□□ -0.21
Trim9-202ENSMUST00000110522 MvpQ9EQK5 861 aa13.73□□□□□ -0.21
Trim9-202ENSMUST00000110522 Idi2Q8BFZ6 227 aa13.73□□□□□ -0.21
Trim9-202ENSMUST00000110522 Gimap6Q8K349 305 aa13.73□□□□□ -0.21
Trim9-202ENSMUST00000110522 AlkP97793 1621 aa13.73□□□□□ -0.21
Trim9-202ENSMUST00000110522 Gas2l2Q5SSG4 860 aa13.73□□□□□ -0.21
Trim9-202ENSMUST00000110522 Klhdc4Q921I2 584 aa13.73□□□□□ -0.21
Trim9-202ENSMUST00000110522 CarsQ9ER72 831 aaKnown RBP13.72□□□□□ -0.21
Trim9-202ENSMUST00000110522 Abcc6Q9R1S7 1498 aa13.72□□□□□ -0.21
Trim9-202ENSMUST00000110522 Arhgef11Q68FM7 1552 aa13.72□□□□□ -0.21
Trim9-202ENSMUST00000110522 PsapQ61207 557 aaKnown RBP13.72□□□□□ -0.21
Trim9-202ENSMUST00000110522 Abcc2Q8VI47 1543 aa13.72□□□□□ -0.21
Trim9-202ENSMUST00000110522 CastP51125 788 aa13.72□□□□□ -0.21
Trim9-202ENSMUST00000110522 Zkscan2G3X952 960 aa13.72□□□□□ -0.21
Trim9-202ENSMUST00000110522 Ddx54Q8K4L0 874 aaKnown RBP13.72□□□□□ -0.21
Trim9-202ENSMUST00000110522 Rusc2Q80U22 1514 aa13.71□□□□□ -0.21
Trim9-202ENSMUST00000110522 Smarca5Q91ZW3 1051 aaKnown RBP13.71□□□□□ -0.21
Trim9-202ENSMUST00000110522 Zmym4A2A791 1549 aaKnown RBP13.71□□□□□ -0.22
Trim9-202ENSMUST00000110522 Gtf3c3Q3TMP1 882 aa13.71□□□□□ -0.22
Trim9-202ENSMUST00000110522 PogkQ80TC5 607 aa13.71□□□□□ -0.22
Trim9-202ENSMUST00000110522 Mcm2P97310 904 aa13.7□□□□□ -0.22
Trim9-202ENSMUST00000110522 R3hcc1Q8BSI6 488 aa13.7□□□□□ -0.22
Trim9-202ENSMUST00000110522 Fam50bQ9WTJ8 334 aa13.7□□□□□ -0.22
Trim9-202ENSMUST00000110522 Tfip11Q9ERA6 838 aaKnown RBP13.7□□□□□ -0.22
Trim9-202ENSMUST00000110522 Erc2Q6PH08 957 aa13.7□□□□□ -0.22
Trim9-202ENSMUST00000110522 AatkQ80YE4 1365 aa13.69□□□□□ -0.22
Trim9-202ENSMUST00000110522 TkfcQ8VC30 578 aa13.69□□□□□ -0.22
Trim9-202ENSMUST00000110522 Speer4bQ9D9F7 267 aa13.69□□□□□ -0.22
Trim9-202ENSMUST00000110522 TefQ9JLC6 301 aa13.69□□□□□ -0.22
Trim9-202ENSMUST00000110522 InsrP15208 1372 aa13.69□□□□□ -0.22
Trim9-202ENSMUST00000110522 Prkar2bP31324 416 aa13.68□□□□□ -0.22
Trim9-202ENSMUST00000110522 KinQ8K339 391 aa13.68□□□□□ -0.22
Trim9-202ENSMUST00000110522 Gcc1Q9D4H2 778 aa13.68□□□□□ -0.22
Trim9-202ENSMUST00000110522 Ptch1Q61115 1434 aa13.68□□□□□ -0.22
Trim9-202ENSMUST00000110522 Btbd11Q6GQW0 1109 aa13.68□□□□□ -0.22
Trim9-202ENSMUST00000110522 Ccer1Q9CQL2 403 aa13.68□□□□□ -0.22
Trim9-202ENSMUST00000110522 Gm21680A0A0G2JGR8 267 aa13.68□□□□□ -0.22
Trim9-202ENSMUST00000110522 Ddx11Q6AXC6 880 aa13.68□□□□□ -0.22
Trim9-202ENSMUST00000110522 Tmem132eQ6IEE6 982 aa13.68□□□□□ -0.22
Trim9-202ENSMUST00000110522 Cfap74Q3UY96 1578 aa13.68□□□□□ -0.22
Trim9-202ENSMUST00000110522 FosbP13346 338 aa13.67□□□□□ -0.22
Trim9-202ENSMUST00000110522 Tmem94Q7TSH8 1360 aa13.67□□□□□ -0.22
Trim9-202ENSMUST00000110522 Znf518aB2RRF6 1478 aaKnown RBP13.67□□□□□ -0.22
Trim9-202ENSMUST00000110522 Sptbn5F6UCX4 1208 aa13.67□□□□□ -0.22
Trim9-202ENSMUST00000110522 Gm21663A0A0G2JE01 267 aa13.66□□□□□ -0.22
Trim9-202ENSMUST00000110522 Gm7361D3Z6R1 267 aa13.66□□□□□ -0.22
Trim9-202ENSMUST00000110522 5031410I06RikE9Q4E0 267 aa13.66□□□□□ -0.22
Trim9-202ENSMUST00000110522 Gm1979E9QAN3 267 aa13.66□□□□□ -0.22
Trim9-202ENSMUST00000110522 Gm5862K7N5V5 267 aa13.66□□□□□ -0.22
Trim9-202ENSMUST00000110522 Gm10220K7N660 267 aa13.66□□□□□ -0.22
Trim9-202ENSMUST00000110522 Jakmip1Q8BVL9 626 aa13.66□□□□□ -0.22
Trim9-202ENSMUST00000110522 Unc13aQ4KUS2 1712 aa13.66□□□□□ -0.22
Trim9-202ENSMUST00000110522 Duxf3A0A0N4SV92 674 aa13.66□□□□□ -0.22
Trim9-202ENSMUST00000110522 Nol8Q3UHX0 1147 aaKnown RBP13.66□□□□□ -0.22
Trim9-202ENSMUST00000110522 Smg7Q5RJH6 1138 aaKnown RBP13.66□□□□□ -0.22
Trim9-202ENSMUST00000110522 Sf3a1Q8K4Z5 791 aaKnown RBP13.66□□□□□ -0.22
Trim9-202ENSMUST00000110522 Smc3Q9CW03 1217 aaKnown RBP13.66□□□□□ -0.22
Trim9-202ENSMUST00000110522 Atf7ipQ7TT18 1306 aa13.66□□□□□ -0.22
Trim9-202ENSMUST00000110522 Sos1Q62245 1319 aa13.65□□□□□ -0.22
Trim9-202ENSMUST00000110522 Gcc2Q8CHG3 1679 aa13.65□□□□□ -0.22
Trim9-202ENSMUST00000110522 Prrc2bQ7TPM1 1486 aaKnown RBP13.65□□□□□ -0.22
Trim9-202ENSMUST00000110522 Kdm6bQ5NCY0 1641 aa13.65□□□□□ -0.22
Trim9-202ENSMUST00000110522 Polr3gQ6NXY9 223 aa13.65□□□□□ -0.22
Trim9-202ENSMUST00000110522 Mical1Q8VDP3 1048 aa13.65□□□□□ -0.22
Trim9-202ENSMUST00000110522 Edc4Q3UJB9 1406 aaKnown RBP13.65□□□□□ -0.23
Trim9-202ENSMUST00000110522 Usp48Q3V0C5 1052 aa13.64□□□□□ -0.23
Trim9-202ENSMUST00000110522 Supt6hQ62383 1726 aaKnown RBP13.64□□□□□ -0.23
Trim9-202ENSMUST00000110522 Nap1l3Q794H2 544 aa13.64□□□□□ -0.23
Trim9-202ENSMUST00000110522 NexnQ7TPW1 607 aa13.64□□□□□ -0.23
Trim9-202ENSMUST00000110522 Rnf20Q5DTM8 973 aa13.64□□□□□ -0.23
Trim9-202ENSMUST00000110522 1700010I14RikQ7TPG0 532 aa13.64□□□□□ -0.23
Trim9-202ENSMUST00000110522 Babam1Q3UI43 333 aa13.63□□□□□ -0.23
Trim9-202ENSMUST00000110522 Ccdc155Q80VJ8 648 aa13.63□□□□□ -0.23
Trim9-202ENSMUST00000110522 Erbb3Q61526 1339 aa13.63□□□□□ -0.23
Trim9-202ENSMUST00000110522 Znf608Q56A10 1511 aa13.63□□□□□ -0.23
Trim9-202ENSMUST00000110522 Mad1l1Q9WTX8 717 aaKnown RBP13.63□□□□□ -0.23
Trim9-202ENSMUST00000110522 Gli2Q0VGT2 1544 aa13.63□□□□□ -0.23
Trim9-202ENSMUST00000110522 Acsbg1Q99PU5 721 aa13.62□□□□□ -0.23
Trim9-202ENSMUST00000110522 Lrriq1Q0P5X1 1673 aa13.62□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 72.6 ms