RNA–Protein interactions for RNA: ENSMUST00000110520.9

Trim9-201, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-201ENSMUST00000110520 Rsph3aQ3UFY4 516 aa11.79□□□□□ -0.52
Trim9-201ENSMUST00000110520 Cgnl1Q6AW69 1298 aa11.79□□□□□ -0.52
Trim9-201ENSMUST00000110520 Dot1lQ6XZL8 1540 aa11.79□□□□□ -0.52
Trim9-201ENSMUST00000110520 Pnmal2G3X9N3 661 aa11.79□□□□□ -0.52
Trim9-201ENSMUST00000110520 Map3k13Q1HKZ5 959 aa11.79□□□□□ -0.52
Trim9-201ENSMUST00000110520 Ccne1Q61457 408 aa11.79□□□□□ -0.52
Trim9-201ENSMUST00000110520 Casc1Q6TDU8 730 aa11.79□□□□□ -0.52
Trim9-201ENSMUST00000110520 Clstn1Q9EPL2 979 aa11.79□□□□□ -0.52
Trim9-201ENSMUST00000110520 Pes1Q9EQ61 584 aaKnown RBP11.79□□□□□ -0.52
Trim9-201ENSMUST00000110520 Cfap74Q3UY96 1578 aa11.78□□□□□ -0.52
Trim9-201ENSMUST00000110520 Sptbn5F6UCX4 1208 aa11.78□□□□□ -0.52
Trim9-201ENSMUST00000110520 CgnP59242 1191 aa11.78□□□□□ -0.52
Trim9-201ENSMUST00000110520 Chmp3Q9CQ10 224 aa11.78□□□□□ -0.52
Trim9-201ENSMUST00000110520 Pbrm1Q8BSQ9 1634 aaKnown RBP11.78□□□□□ -0.52
Trim9-201ENSMUST00000110520 Stk3Q9JI10 497 aa11.78□□□□□ -0.52
Trim9-201ENSMUST00000110520 Gm10471E9Q1C7 252 aa11.78□□□□□ -0.52
Trim9-201ENSMUST00000110520 CarsQ9ER72 831 aaKnown RBP11.78□□□□□ -0.52
Trim9-201ENSMUST00000110520 Sbno1Q689Z5 1390 aa11.77□□□□□ -0.52
Trim9-201ENSMUST00000110520 AU019823E9PUQ3 292 aa11.77□□□□□ -0.52
Trim9-201ENSMUST00000110520 Pip4k2bQ80XI4 416 aa11.77□□□□□ -0.52
Trim9-201ENSMUST00000110520 Aldh1l1Q8R0Y6 902 aa11.77□□□□□ -0.52
Trim9-201ENSMUST00000110520 AU015836B2RUM3 263 aa11.77□□□□□ -0.53
Trim9-201ENSMUST00000110520 Fchsd2Q3USJ8 740 aa11.77□□□□□ -0.53
Trim9-201ENSMUST00000110520 Mast1Q9R1L5 1570 aa11.77□□□□□ -0.53
Trim9-201ENSMUST00000110520 Evi5lH3BKQ3 813 aa11.77□□□□□ -0.53
Trim9-201ENSMUST00000110520 Ppp1r15aP17564 657 aa11.76□□□□□ -0.53
Trim9-201ENSMUST00000110520 Cwc27Q3TKY6 469 aa11.76□□□□□ -0.53
Trim9-201ENSMUST00000110520 MvpQ9EQK5 861 aa11.76□□□□□ -0.53
Trim9-201ENSMUST00000110520 Mbd5B1AYB6 1498 aa11.76□□□□□ -0.53
Trim9-201ENSMUST00000110520 Cetn4Q8K4K1 168 aa11.76□□□□□ -0.53
Trim9-201ENSMUST00000110520 Cyp46a1Q9WVK8 500 aa11.76□□□□□ -0.53
Trim9-201ENSMUST00000110520 Gm10563F6WIE4 79 aa11.75□□□□□ -0.53
Trim9-201ENSMUST00000110520 Casq1O09165 405 aa11.75□□□□□ -0.53
Trim9-201ENSMUST00000110520 Prrc2bQ7TPM1 1486 aaKnown RBP11.75□□□□□ -0.53
Trim9-201ENSMUST00000110520 Mphosph10Q810V0 681 aaKnown RBP11.75□□□□□ -0.53
Trim9-201ENSMUST00000110520 InsrP15208 1372 aa11.75□□□□□ -0.53
Trim9-201ENSMUST00000110520 Tmem132eQ6IEE6 982 aa11.75□□□□□ -0.53
Trim9-201ENSMUST00000110520 HypkQ9CR41 129 aa11.75□□□□□ -0.53
Trim9-201ENSMUST00000110520 P2rx7Q9Z1M0 595 aa11.75□□□□□ -0.53
Trim9-201ENSMUST00000110520 Eif4g3Q80XI3 1579 aaKnown RBP11.75□□□□□ -0.53
Trim9-201ENSMUST00000110520 Gli2Q0VGT2 1544 aa11.75□□□□□ -0.53
Trim9-201ENSMUST00000110520 Znf518aB2RRF6 1478 aaKnown RBP11.75□□□□□ -0.53
Trim9-201ENSMUST00000110520 Rab11fip3Q8CHD8 1047 aa11.75□□□□□ -0.53
Trim9-201ENSMUST00000110520 Plcd4Q8K3R3 807 aa11.74□□□□□ -0.53
Trim9-201ENSMUST00000110520 Kiaa1107Q80TK0 1369 aa11.74□□□□□ -0.53
Trim9-201ENSMUST00000110520 Usp54Q8BL06 1588 aaKnown RBP11.74□□□□□ -0.53
Trim9-201ENSMUST00000110520 Prkar2bP31324 416 aa11.74□□□□□ -0.53
Trim9-201ENSMUST00000110520 Kdm2bQ6P1G2 1309 aa11.74□□□□□ -0.53
Trim9-201ENSMUST00000110520 Tex14Q7M6U3 1450 aa11.74□□□□□ -0.53
Trim9-201ENSMUST00000110520 Rrbp1Q99PL5 1605 aaKnown RBP11.74□□□□□ -0.53
Trim9-201ENSMUST00000110520 AppP12023 770 aa11.74□□□□□ -0.53
Trim9-201ENSMUST00000110520 Prim1P20664 417 aa11.74□□□□□ -0.53
Trim9-201ENSMUST00000110520 Srgap3Q812A2 1099 aa11.74□□□□□ -0.53
Trim9-201ENSMUST00000110520 Snap23O09044 210 aa11.73□□□□□ -0.53
Trim9-201ENSMUST00000110520 Ppp1r9bQ6R891 817 aaKnown RBP11.73□□□□□ -0.53
Trim9-201ENSMUST00000110520 CrebrfQ8CDG5 640 aaKnown RBP11.73□□□□□ -0.53
Trim9-201ENSMUST00000110520 Exoc6bA6H5Z3 810 aa11.73□□□□□ -0.53
Trim9-201ENSMUST00000110520 PogkQ80TC5 607 aa11.73□□□□□ -0.53
Trim9-201ENSMUST00000110520 Setbp1Q9Z180 1582 aa11.73□□□□□ -0.53
Trim9-201ENSMUST00000110520 CatipB9EKE5 520 aa11.73□□□□□ -0.53
Trim9-201ENSMUST00000110520 Neurod6P48986 337 aa11.73□□□□□ -0.53
Trim9-201ENSMUST00000110520 Iffo2Q8R2V2 512 aa11.73□□□□□ -0.53
Trim9-201ENSMUST00000110520 Idi2Q8BFZ6 227 aa11.72□□□□□ -0.53
Trim9-201ENSMUST00000110520 Zranb3Q6NZP1 1069 aa11.72□□□□□ -0.53
Trim9-201ENSMUST00000110520 Ssh1Q76I79 1042 aa11.72□□□□□ -0.53
Trim9-201ENSMUST00000110520 Lrrc7Q80TE7 1490 aa11.72□□□□□ -0.53
Trim9-201ENSMUST00000110520 Nkx1-2P42580 305 aa11.72□□□□□ -0.53
Trim9-201ENSMUST00000110520 Filip1lQ6P6L0 1131 aa11.72□□□□□ -0.53
Trim9-201ENSMUST00000110520 Q8BT18 775 aa11.72□□□□□ -0.53
Trim9-201ENSMUST00000110520 Chmp7Q8R1T1 451 aa11.72□□□□□ -0.53
Trim9-201ENSMUST00000110520 Tceal9Q9DD24 104 aa11.72□□□□□ -0.53
Trim9-201ENSMUST00000110520 Lamc1P02468 1607 aaKnown RBP11.72□□□□□ -0.53
Trim9-201ENSMUST00000110520 AampJ3QN89 436 aa11.71□□□□□ -0.53
Trim9-201ENSMUST00000110520 CalcaP70160 136 aa11.71□□□□□ -0.53
Trim9-201ENSMUST00000110520 Babam1Q3UI43 333 aa11.71□□□□□ -0.53
Trim9-201ENSMUST00000110520 Tulp4Q9JIL5 1547 aa11.71□□□□□ -0.53
Trim9-201ENSMUST00000110520 PalldQ9ET54 1408 aa11.71□□□□□ -0.53
Trim9-201ENSMUST00000110520 Usp19Q3UJD6 1360 aa11.71□□□□□ -0.53
Trim9-201ENSMUST00000110520 Setd1bQ8CFT2 1985 aa11.71□□□□□ -0.54
Trim9-201ENSMUST00000110520 Aifm3Q3TY86 605 aa11.71□□□□□ -0.54
Trim9-201ENSMUST00000110520 Ppip5k1A2ARP1 1436 aa11.71□□□□□ -0.54
Trim9-201ENSMUST00000110520 Nphp4P59240 1425 aa11.71□□□□□ -0.54
Trim9-201ENSMUST00000110520 Gnai2P08752 355 aaKnown RBP11.71□□□□□ -0.54
Trim9-201ENSMUST00000110520 Nphp1Q9QY53 687 aa11.71□□□□□ -0.54
Trim9-201ENSMUST00000110520 Dnmt1P13864 1620 aaKnown RBP11.71□□□□□ -0.54
Trim9-201ENSMUST00000110520 Vamp4O70480 141 aa11.7□□□□□ -0.54
Trim9-201ENSMUST00000110520 Eif4a2P10630 407 aa11.7□□□□□ -0.54
Trim9-201ENSMUST00000110520 FanclQ9CR14 375 aa11.7□□□□□ -0.54
Trim9-201ENSMUST00000110520 Kdm5cP41230 1554 aa11.7□□□□□ -0.54
Trim9-201ENSMUST00000110520 PtprtQ99M80 1454 aa11.7□□□□□ -0.54
Trim9-201ENSMUST00000110520 Fam83gQ5SWY7 812 aa11.69□□□□□ -0.54
Trim9-201ENSMUST00000110520 Map3k19E9Q3S4 1311 aa11.69□□□□□ -0.54
Trim9-201ENSMUST00000110520 Kif1bQ60575 1816 aaKnown RBP11.69□□□□□ -0.54
Trim9-201ENSMUST00000110520 Pola1P33609 1465 aa11.69□□□□□ -0.54
Trim9-201ENSMUST00000110520 Rsph6aQ8CDR2 708 aa11.69□□□□□ -0.54
Trim9-201ENSMUST00000110520 GnpatP98192 678 aa11.69□□□□□ -0.54
Trim9-201ENSMUST00000110520 Tbc1d9Q3UYK3 1264 aa11.69□□□□□ -0.54
Trim9-201ENSMUST00000110520 Jakmip1Q8BVL9 626 aa11.69□□□□□ -0.54
Trim9-201ENSMUST00000110520 Ankrd44B2RXR6 993 aa11.68□□□□□ -0.54
Trim9-201ENSMUST00000110520 Rnf214Q8BFU3 668 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 36.9 ms