RNA–Protein interactions for RNA: ENSMUST00000084885.11

Ubp1-202, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 5 BASIC

Gene Ubp1, Length 3,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-202ENSMUST00000084885 Fndc1E9Q043 1732 aa20.47■□□□□ 0.87
Ubp1-202ENSMUST00000084885 PalldQ9ET54 1408 aa20.47■□□□□ 0.87
Ubp1-202ENSMUST00000084885 KarsQ99MN1 595 aaKnown RBP20.47■□□□□ 0.87
Ubp1-202ENSMUST00000084885 Dixdc1Q80Y83 711 aa20.47■□□□□ 0.87
Ubp1-202ENSMUST00000084885 Gm32742A0A1B0GT42 1604 aa20.46■□□□□ 0.87
Ubp1-202ENSMUST00000084885 Farp2Q91VS8 1065 aa20.46■□□□□ 0.87
Ubp1-202ENSMUST00000084885 Ccdc155Q80VJ8 648 aa20.46■□□□□ 0.87
Ubp1-202ENSMUST00000084885 DekQ7TNV0 380 aaKnown RBP20.46■□□□□ 0.87
Ubp1-202ENSMUST00000084885 Chmp3Q9CQ10 224 aa20.46■□□□□ 0.87
Ubp1-202ENSMUST00000084885 Efcab6Q6P1E8 1516 aa20.46■□□□□ 0.87
Ubp1-202ENSMUST00000084885 Sv2bQ8BG39 683 aa20.45■□□□□ 0.86
Ubp1-202ENSMUST00000084885 Frmpd2A0A140LI67 1392 aa20.45■□□□□ 0.86
Ubp1-202ENSMUST00000084885 Tulp4Q9JIL5 1547 aa20.45■□□□□ 0.86
Ubp1-202ENSMUST00000084885 Cfdp1O88271 295 aaKnown RBP20.45■□□□□ 0.86
Ubp1-202ENSMUST00000084885 Map3k13Q1HKZ5 959 aa20.45■□□□□ 0.86
Ubp1-202ENSMUST00000084885 Uspl1Q3ULM6 1089 aa20.45■□□□□ 0.86
Ubp1-202ENSMUST00000084885 Ciz1Q8VEH2 845 aa20.45■□□□□ 0.86
Ubp1-202ENSMUST00000084885 Speer4bQ9D9F7 267 aa20.45■□□□□ 0.86
Ubp1-202ENSMUST00000084885 Slc35g1Q8BY79 368 aa20.44■□□□□ 0.86
Ubp1-202ENSMUST00000084885 Slain2Q8CI08 581 aa20.44■□□□□ 0.86
Ubp1-202ENSMUST00000084885 Myo3aQ8K3H5 1613 aa20.44■□□□□ 0.86
Ubp1-202ENSMUST00000084885 Dnajc10Q9DC23 793 aa20.44■□□□□ 0.86
Ubp1-202ENSMUST00000084885 Gm21680A0A0G2JGR8 267 aa20.43■□□□□ 0.86
Ubp1-202ENSMUST00000084885 Ttll13A4Q9F6 804 aa20.43■□□□□ 0.86
Ubp1-202ENSMUST00000084885 Dzip1Q8BMD2 852 aa20.43■□□□□ 0.86
Ubp1-202ENSMUST00000084885 Clstn1Q9EPL2 979 aa20.43■□□□□ 0.86
Ubp1-202ENSMUST00000084885 Zpr1Q62384 459 aa20.42■□□□□ 0.86
Ubp1-202ENSMUST00000084885 Ppp1r15aP17564 657 aa20.42■□□□□ 0.86
Ubp1-202ENSMUST00000084885 Znf692Q3U381 531 aa20.42■□□□□ 0.86
Ubp1-202ENSMUST00000084885 Chmp4cQ9D7F7 232 aa20.42■□□□□ 0.86
Ubp1-202ENSMUST00000084885 Eif4a2P10630 407 aa20.42■□□□□ 0.86
Ubp1-202ENSMUST00000084885 Prim1P20664 417 aa20.41■□□□□ 0.86
Ubp1-202ENSMUST00000084885 Cdc42bpbQ7TT50 1713 aa20.41■□□□□ 0.86
Ubp1-202ENSMUST00000084885 Atp10aO54827 1508 aa20.41■□□□□ 0.86
Ubp1-202ENSMUST00000084885 Maco1Q7TQE6 664 aaKnown RBP20.4■□□□□ 0.86
Ubp1-202ENSMUST00000084885 Map7O88735 730 aa20.4■□□□□ 0.86
Ubp1-202ENSMUST00000084885 Brpf1B2RRD7 1212 aa20.39■□□□□ 0.86
Ubp1-202ENSMUST00000084885 Cnnm1Q0GA42 951 aa20.39■□□□□ 0.85
Ubp1-202ENSMUST00000084885 Gimap6Q8K349 305 aa20.39■□□□□ 0.85
Ubp1-202ENSMUST00000084885 Nphp4P59240 1425 aa20.39■□□□□ 0.85
Ubp1-202ENSMUST00000084885 Zcchc11B2RX14 1644 aaKnown RBP20.39■□□□□ 0.85
Ubp1-202ENSMUST00000084885 Gsdma3Q5Y4Y6 464 aa20.38■□□□□ 0.85
Ubp1-202ENSMUST00000084885 BcanQ61361 883 aa20.37■□□□□ 0.85
Ubp1-202ENSMUST00000084885 HnrnpuQ8VEK3 800 aaKnown RBP20.37■□□□□ 0.85
Ubp1-202ENSMUST00000084885 Sf3b2Q3UJB0 878 aaKnown RBP20.37■□□□□ 0.85
Ubp1-202ENSMUST00000084885 Prkrip1Q9CWV6 186 aaKnown RBP20.37■□□□□ 0.85
Ubp1-202ENSMUST00000084885 Sart3Q9JLI8 962 aaKnown RBP20.37■□□□□ 0.85
Ubp1-202ENSMUST00000084885 Ppip5k1A2ARP1 1436 aa20.37■□□□□ 0.85
Ubp1-202ENSMUST00000084885 Chmp4bQ9D8B3 224 aaKnown RBP20.36■□□□□ 0.85
Ubp1-202ENSMUST00000084885 Stk11ipQ3TAA7 1072 aa20.36■□□□□ 0.85
Ubp1-202ENSMUST00000084885 Gm21663A0A0G2JE01 267 aa20.35■□□□□ 0.85
Ubp1-202ENSMUST00000084885 Gm7361D3Z6R1 267 aa20.35■□□□□ 0.85
Ubp1-202ENSMUST00000084885 5031410I06RikE9Q4E0 267 aa20.35■□□□□ 0.85
Ubp1-202ENSMUST00000084885 Gm1979E9QAN3 267 aa20.35■□□□□ 0.85
Ubp1-202ENSMUST00000084885 Gm5862K7N5V5 267 aa20.35■□□□□ 0.85
Ubp1-202ENSMUST00000084885 Gm10220K7N660 267 aa20.35■□□□□ 0.85
Ubp1-202ENSMUST00000084885 Mphosph10Q810V0 681 aaKnown RBP20.35■□□□□ 0.85
Ubp1-202ENSMUST00000084885 Abca6Q8K441 1624 aa20.35■□□□□ 0.85
Ubp1-202ENSMUST00000084885 Map4k4P97820 1233 aaKnown RBP20.35■□□□□ 0.85
Ubp1-202ENSMUST00000084885 KnstrnQ9D9Z1 312 aaKnown RBP20.35■□□□□ 0.85
Ubp1-202ENSMUST00000084885 TimelessQ9R1X4 1197 aa20.35■□□□□ 0.85
Ubp1-202ENSMUST00000084885 Exoc6bA6H5Z3 810 aa20.35■□□□□ 0.85
Ubp1-202ENSMUST00000084885 Rsph6aQ8CDR2 708 aa20.35■□□□□ 0.85
Ubp1-202ENSMUST00000084885 AppP12023 770 aa20.34■□□□□ 0.85
Ubp1-202ENSMUST00000084885 Gm16486A0A1D5RMD1 1434 aa20.34■□□□□ 0.85
Ubp1-202ENSMUST00000084885 Lmod3E9QA62 571 aa20.34■□□□□ 0.85
Ubp1-202ENSMUST00000084885 Plekhm2Q80TQ5 1018 aa20.34■□□□□ 0.85
Ubp1-202ENSMUST00000084885 Dip2cE9PWR4 1557 aa20.34■□□□□ 0.85
Ubp1-202ENSMUST00000084885 Robo2Q7TPD3 1470 aa20.34■□□□□ 0.85
Ubp1-202ENSMUST00000084885 P2rx7Q9Z1M0 595 aa20.33■□□□□ 0.85
Ubp1-202ENSMUST00000084885 Trpm2Q91YD4 1506 aa20.33■□□□□ 0.85
Ubp1-202ENSMUST00000084885 Eya1P97767 591 aa20.33■□□□□ 0.85
Ubp1-202ENSMUST00000084885 Ak7Q9D2H2 614 aa20.32■□□□□ 0.84
Ubp1-202ENSMUST00000084885 Eif2s2Q99L45 331 aaKnown RBP20.32■□□□□ 0.84
Ubp1-202ENSMUST00000084885 Erbb3Q61526 1339 aa20.32■□□□□ 0.84
Ubp1-202ENSMUST00000084885 Dnajc5P60904 198 aa20.32■□□□□ 0.84
Ubp1-202ENSMUST00000084885 Nlgn1Q99K10 843 aa20.32■□□□□ 0.84
Ubp1-202ENSMUST00000084885 Ppp1r3fQ9JIG4 799 aa20.31■□□□□ 0.84
Ubp1-202ENSMUST00000084885 Kidins220E9Q9B7 1793 aa20.31■□□□□ 0.84
Ubp1-202ENSMUST00000084885 TkfcQ8VC30 578 aa20.31■□□□□ 0.84
Ubp1-202ENSMUST00000084885 Ercc6l2Q9JIM3 1537 aa20.31■□□□□ 0.84
Ubp1-202ENSMUST00000084885 Cul7Q8VE73 1689 aa20.31■□□□□ 0.84
Ubp1-202ENSMUST00000084885 Txnrd1Q9JMH6 613 aa20.3■□□□□ 0.84
Ubp1-202ENSMUST00000084885 Btbd11Q6GQW0 1109 aa20.3■□□□□ 0.84
Ubp1-202ENSMUST00000084885 Fchsd2Q3USJ8 740 aa20.3■□□□□ 0.84
Ubp1-202ENSMUST00000084885 Ipo8Q7TMY7 1010 aa20.3■□□□□ 0.84
Ubp1-202ENSMUST00000084885 Q3UPC7 1272 aa20.29■□□□□ 0.84
Ubp1-202ENSMUST00000084885 IghaA0A0A6YXW6 389 aa20.28■□□□□ 0.84
Ubp1-202ENSMUST00000084885 Lamc1P02468 1607 aaKnown RBP20.28■□□□□ 0.84
Ubp1-202ENSMUST00000084885 Ppm1gQ61074 542 aa20.28■□□□□ 0.84
Ubp1-202ENSMUST00000084885 Gimap5Q8BWF2 308 aa20.28■□□□□ 0.84
Ubp1-202ENSMUST00000084885 Uggt2E9Q4X2 1504 aa20.28■□□□□ 0.84
Ubp1-202ENSMUST00000084885 Eif4g2Q62448 906 aaKnown RBP20.28■□□□□ 0.84
Ubp1-202ENSMUST00000084885 Dnai1Q8C0M8 701 aa20.27■□□□□ 0.84
Ubp1-202ENSMUST00000084885 Plcb2A3KGF7 1181 aa20.27■□□□□ 0.83
Ubp1-202ENSMUST00000084885 Sbno1Q689Z5 1390 aa20.26■□□□□ 0.83
Ubp1-202ENSMUST00000084885 Neurod6P48986 337 aa20.26■□□□□ 0.83
Ubp1-202ENSMUST00000084885 Chrna2Q91X60 512 aa20.26■□□□□ 0.83
Ubp1-202ENSMUST00000084885 Chpf2Q3UU43 768 aa20.26■□□□□ 0.83
Ubp1-202ENSMUST00000084885 Kcnh5Q920E3 988 aa20.26■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms