RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Stag1Q9D3E6 1258 aa11.54□□□□□ -0.56
Upf3b-201ENSMUST00000076265 AI481877A2ALV5 1481 aa11.53□□□□□ -0.56
Upf3b-201ENSMUST00000076265 Ccbe1Q3MI99 408 aa11.53□□□□□ -0.56
Upf3b-201ENSMUST00000076265 InaP46660 501 aa11.53□□□□□ -0.56
Upf3b-201ENSMUST00000076265 Psen1P49769 467 aa11.53□□□□□ -0.56
Upf3b-201ENSMUST00000076265 Irf9Q61179 399 aa11.53□□□□□ -0.56
Upf3b-201ENSMUST00000076265 Amotl2Q8K371 772 aa11.53□□□□□ -0.56
Upf3b-201ENSMUST00000076265 Akt1s1Q9D1F4 257 aa11.53□□□□□ -0.56
Upf3b-201ENSMUST00000076265 Strn4P58404 760 aa11.52□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Ttf2Q5NC05 1138 aa11.52□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Zranb2Q9R020 330 aaKnown RBP11.52□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Bach1P97302 739 aa11.52□□□□□ -0.57
Upf3b-201ENSMUST00000076265 MpndQ3TV65 487 aa11.52□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Fbxw10Q5SUS0 1030 aa11.52□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Recql4Q75NR7 1216 aaKnown RBP11.52□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Prc1Q99K43 603 aaKnown RBP11.52□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Arhgef12Q8R4H2 1543 aaKnown RBP11.51□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Anapc15-psA0A140T8L6 141 aa11.51□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Ankrd23Q812A3 306 aa11.51□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Sf3b2Q3UJB0 878 aaKnown RBP11.51□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Lrrc43Q3V0L5 667 aa11.51□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Ripor2Q80U16 1078 aa11.51□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Q922C1 641 aa11.51□□□□□ -0.57
Upf3b-201ENSMUST00000076265 PigoQ9JJI6 1093 aa11.51□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Gabbr1Q9WV18 960 aa11.51□□□□□ -0.57
Upf3b-201ENSMUST00000076265 A0A1W2P7S8 802 aa11.5□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Nbr1P97432 988 aa11.5□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Spty2d1Q68FG3 682 aa11.5□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Lmbrd2Q8C561 694 aa11.5□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Katnal1Q8K0T4 488 aa11.5□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Upf2A2AT37 1269 aaKnown RBP11.49□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Ifrd1P19182 449 aa11.49□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Best3Q6H1V1 669 aa11.49□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Gtf2a1Q99PM3 378 aa11.49□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Clip1Q922J3 1391 aa11.49□□□□□ -0.57
Upf3b-201ENSMUST00000076265 WrnO09053 1401 aa11.49□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Akap17bA2A3V1 959 aa11.48□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Vamp1Q62442 118 aa11.48□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Ccdc186Q8C9S4 917 aa11.48□□□□□ -0.57
Upf3b-201ENSMUST00000076265 GneQ91WG8 722 aaKnown RBP11.48□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Cyp2c50Q91X77 490 aa11.48□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Ppfia4B8QI36 1187 aa11.48□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Q8BZJ8 459 aa11.48□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Slain2Q8CI08 581 aa11.48□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Plagl1Q9JLQ4 704 aa11.48□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Abca5Q8K448 1642 aa11.48□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Ddx11Q6AXC6 880 aa11.47□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Cep57l1Q8VDS7 400 aa11.47□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Cep162Q6ZQ06 1403 aa11.47□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Polr1aO35134 1717 aaKnown RBP11.47□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Naaladl2A0A0N4SUJ3 795 aa11.47□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Gm7347D3YYI9 267 aa11.47□□□□□ -0.57
Upf3b-201ENSMUST00000076265 P4hbP09103 509 aaKnown RBP11.47□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Slf2Q6P9P0 1278 aa11.47□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Usp33Q8R5K2 909 aa11.47□□□□□ -0.57
Upf3b-201ENSMUST00000076265 4931400O07RikQ9D4M5 137 aa11.47□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Ak9G3UYQ4 1894 aa11.46□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Kdm2bQ6P1G2 1309 aa11.46□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Qtrt2B8ZXI1 415 aa11.46□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Nucb1Q02819 459 aaKnown RBP11.46□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Trim66Q924W6 1242 aa11.46□□□□□ -0.57
Upf3b-201ENSMUST00000076265 Cux1P53564 1515 aa11.46□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Igf1rQ60751 1373 aa11.46□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Usp31E9Q6Y8 1344 aa11.46□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Mta1Q8K4B0 715 aaKnown RBP11.46□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Dhx8A2A4P0 1244 aaKnown RBP11.45□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Zfp651E9PZ11 729 aa11.45□□□□□ -0.58
Upf3b-201ENSMUST00000076265 F10O88947 481 aa11.45□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Fam117bQ3U3E2 584 aa11.45□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Kif11Q6P9P6 1052 aa11.45□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Mkl1Q8K4J6 964 aa11.45□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Nop56Q9D6Z1 580 aaKnown RBP11.45□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Timm44O35857 452 aa11.44□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Nap1l4Q78ZA7 375 aaKnown RBP11.44□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Sgip1Q8VD37 806 aa11.44□□□□□ -0.58
Upf3b-201ENSMUST00000076265 CactinQ9CS00 772 aaKnown RBP11.44□□□□□ -0.58
Upf3b-201ENSMUST00000076265 AmotQ8VHG2 1126 aa11.44□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Anapc15P60007 132 aa11.43□□□□□ -0.58
Upf3b-201ENSMUST00000076265 E2f5Q61502 335 aa11.43□□□□□ -0.58
Upf3b-201ENSMUST00000076265 RbsnQ80Y56 783 aa11.43□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Rpgrip1lQ8CG73 1264 aa11.43□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Aldh1l2Q8K009 923 aa11.43□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Nom1Q3UFM5 854 aaKnown RBP11.43□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Tcerg1Q8CGF7 1100 aaKnown RBP11.43□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Raver1Q9CW46 748 aaKnown RBP11.43□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Speer4bQ9D9F7 267 aa11.43□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Arid3cA6PWV5 409 aa11.42□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Vti1aO89116 217 aa11.42□□□□□ -0.58
Upf3b-201ENSMUST00000076265 EvlP70429 414 aa11.42□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Tshz1Q5DTH5 1084 aa11.42□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Polr3eQ9CZT4 710 aa11.42□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Plcb2A3KGF7 1181 aa11.42□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Btn2a2A4QPC6 514 aa11.42□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Dhx16G3X8X0 1044 aaKnown RBP11.42□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Gas2l2Q5SSG4 860 aa11.42□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Jazf1Q80ZQ5 243 aa11.42□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Fyco1Q8VDC1 1437 aa11.41□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Ube4aE9Q735 1028 aa11.41□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Gabpb2P81069 414 aa11.41□□□□□ -0.58
Upf3b-201ENSMUST00000076265 Kif22Q3V300 660 aa11.41□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 78.9 ms