RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Kif3bQ61771 747 aa17.41■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Q9D9S1 216 aa17.41■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Fam193aQ8CGI1 1231 aaKnown RBP17.4■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Necab1Q8BG18 352 aa17.4■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Wdr33Q8K4P0 1330 aaKnown RBP17.39■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Paxbp1P58501 919 aa17.39■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Nutm1Q8BHP2 1126 aa17.39■□□□□ 0.38
Pcdha1-201ENSMUST00000070797 Stk11ipQ3TAA7 1072 aa17.39■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Slu7Q8BHJ9 585 aa17.39■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Kcnj4P52189 445 aa17.39■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 4931400O07RikQ9D4M5 137 aa17.39■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Arid4aF8VPQ2 1261 aaKnown RBP17.39■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Ppip5k2Q6ZQB6 1129 aa17.39■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 TchhA0A0B4J1F9 1599 aa17.39■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 A0A0U1RNP2 1173 aa17.38■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Mctp1E9PV86 951 aa17.38■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Nectin2P32507 530 aa17.38■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Tbc1d32Q3URV1 1296 aa17.38■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Cfap58B2RW38 873 aa17.38■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Frmd3Q8BHD4 595 aa17.38■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 NinlQ6ZQ12 1394 aa17.38■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 HmmrQ00547 794 aaKnown RBP17.38■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 LarsQ8BMJ2 1178 aa17.38■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Nucb2P81117 420 aa17.37■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Phlpp2Q8BXA7 1320 aa17.37■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Tfip11Q9ERA6 838 aaKnown RBP17.37■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Hap1O35668 628 aa17.37■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Cc2d2bA0A286YDU8 1405 aa17.37■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 HdgfP51859 237 aaKnown RBP17.37■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Ncoa2Q61026 1462 aa17.37■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Cnnm3Q32NY4 713 aa17.36■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Samm50Q8BGH2 469 aa17.36■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Q8BT18 775 aa17.36■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 CarsQ9ER72 831 aaKnown RBP17.35■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Top2bQ64511 1612 aa17.35■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Bag4Q8CI61 457 aa17.35■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 CenpqQ9CPQ5 267 aa17.35■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Dync1i1O88485 628 aa17.35■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Zhx1P70121 873 aa17.35■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 ItpripQ3TNL8 555 aa17.35■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 LrpprcQ6PB66 1392 aaKnown RBP17.35■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Ppp6r1Q7TSI3 856 aa17.34■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 ErbinQ80TH2 1402 aa17.34■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Gm42641I6L9G2 585 aa17.34■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Kif2aP28740 705 aa17.34■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 AtripQ8BMG1 785 aa17.34■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Egfem1Q8C088 590 aa17.34■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Odf2A3KGV1 830 aaKnown RBP17.34■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Clcn1Q64347 994 aa17.34■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Cep57l1Q8VDS7 400 aa17.33■□□□□ 0.37
Pcdha1-201ENSMUST00000070797 Utp14aQ640M1 767 aaKnown RBP17.33■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Smc4Q8CG47 1286 aa17.33■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Gtpbp4Q99ME9 634 aaKnown RBP17.33■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Nphp1Q9QY53 687 aa17.33■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Dnajc2P54103 621 aaKnown RBP17.33■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 NmiO35309 314 aa17.32■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Sv2bQ8BG39 683 aa17.32■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 MvpQ9EQK5 861 aa17.32■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Ddx19aQ61655 478 aaKnown RBP17.32■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Tspyl2Q7TQI8 677 aa17.32■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Stk38Q91VJ4 465 aa17.32■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Eif3aP23116 1344 aaKnown RBP17.32■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Krt82Q99M74 516 aa17.32■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Ubap1lG3UW59 384 aa17.31■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Adcy5P84309 1262 aa17.31■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Tmem132aQ922P8 1018 aa17.31■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Smc2Q8CG48 1191 aaKnown RBP17.31■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 BbxQ8VBW5 907 aa17.31■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 SelenooQ9DBC0 667 aa17.3■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Gnai2P08752 355 aaKnown RBP17.3■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 FosbP13346 338 aa17.3■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Dhx16G3X8X0 1044 aaKnown RBP17.3■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Pip4k2aO70172 405 aa17.3■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Map4k4P97820 1233 aaKnown RBP17.29■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Kiaa0753Q6A000 959 aa17.29■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Rsph6aQ8CDR2 708 aa17.29■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Trim29Q8R2Q0 587 aa17.29■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Babam1Q3UI43 333 aa17.29■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Jakmip1Q8BVL9 626 aa17.29■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Asxl1P59598 1514 aa17.29■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 AppP12023 770 aa17.28■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Zfp644E9QA22 1323 aa17.28■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 NrkQ9R0G8 1455 aa17.28■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Lekr1B2RVN1 116 aa17.28■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Rasa1E9PYG6 1038 aa17.28■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 TxlnbQ8VBT1 685 aa17.28■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Kri1Q8VDQ9 704 aaKnown RBP17.28■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Ctr9Q62018 1173 aaKnown RBP17.28■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 WrnO09053 1401 aa17.28■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Naip2Q9QUK4 1447 aa17.28■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Maats1Q8BRC6 783 aa17.27■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Zkscan7E9PVW1 718 aa17.27■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Sox12Q04890 314 aa17.27■□□□□ 0.36
Pcdha1-201ENSMUST00000070797 Naip5Q9R016 1403 aa17.27■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Uri1Q3TLD5 531 aa17.26■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Abcf1Q6P542 837 aaKnown RBP17.26■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Tmx4Q8C0L0 335 aa17.26■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Smc1bQ920F6 1248 aa17.26■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Stk3Q9JI10 497 aa17.26■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Nkx1-2P42580 305 aa17.26■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms