RNA–Protein interactions for RNA: ENSMUST00000044565.14

Col16a1-201, Transcript of Collagen alpha-1(XVI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col16a1, Length 5,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1-201ENSMUST00000044565 Rabep1O35551 862 aa18.63■□□□□ 0.57
Col16a1-201ENSMUST00000044565 Vps53Q8CCB4 832 aa18.63■□□□□ 0.57
Col16a1-201ENSMUST00000044565 Nup160Q9Z0W3 1402 aaKnown RBP18.63■□□□□ 0.57
Col16a1-201ENSMUST00000044565 Sf3a1Q8K4Z5 791 aaKnown RBP18.62■□□□□ 0.57
Col16a1-201ENSMUST00000044565 4933402E13RikQ9D4D2 429 aa18.62■□□□□ 0.57
Col16a1-201ENSMUST00000044565 Kdm5bQ80Y84 1544 aa18.62■□□□□ 0.57
Col16a1-201ENSMUST00000044565 Gm10563F6WIE4 79 aa18.62■□□□□ 0.57
Col16a1-201ENSMUST00000044565 Rprd2Q6NXI6 1469 aaKnown RBP18.61■□□□□ 0.57
Col16a1-201ENSMUST00000044565 Wdr7Q920I9 1489 aa18.61■□□□□ 0.57
Col16a1-201ENSMUST00000044565 BC005561E9Q5E2 1589 aa18.61■□□□□ 0.57
Col16a1-201ENSMUST00000044565 Ak7Q9D2H2 614 aa18.61■□□□□ 0.57
Col16a1-201ENSMUST00000044565 Pik3c2gO70167 1506 aa18.61■□□□□ 0.57
Col16a1-201ENSMUST00000044565 Zmym3Q9JLM4 1370 aa18.6■□□□□ 0.57
Col16a1-201ENSMUST00000044565 Kri1Q8VDQ9 704 aaKnown RBP18.6■□□□□ 0.57
Col16a1-201ENSMUST00000044565 Nutm1Q8BHP2 1126 aa18.6■□□□□ 0.57
Col16a1-201ENSMUST00000044565 Sall3Q62255 1320 aa18.6■□□□□ 0.57
Col16a1-201ENSMUST00000044565 Rbm5Q91YE7 815 aaKnown RBP18.6■□□□□ 0.57
Col16a1-201ENSMUST00000044565 Cdc37l1Q9CZP7 335 aa18.6■□□□□ 0.57
Col16a1-201ENSMUST00000044565 Plcd4Q8K3R3 807 aa18.6■□□□□ 0.57
Col16a1-201ENSMUST00000044565 Psma5Q9Z2U1 241 aaKnown RBP18.6■□□□□ 0.57
Col16a1-201ENSMUST00000044565 Cplx1P63040 134 aa18.59■□□□□ 0.57
Col16a1-201ENSMUST00000044565 Cfap74Q3UY96 1578 aa18.59■□□□□ 0.57
Col16a1-201ENSMUST00000044565 Pbrm1Q8BSQ9 1634 aaKnown RBP18.59■□□□□ 0.57
Col16a1-201ENSMUST00000044565 Nphp1Q9QY53 687 aa18.58■□□□□ 0.57
Col16a1-201ENSMUST00000044565 TmpoQ61033 693 aaKnown RBP18.58■□□□□ 0.57
Col16a1-201ENSMUST00000044565 Mre11Q61216 706 aa18.58■□□□□ 0.57
Col16a1-201ENSMUST00000044565 Ccp110Q7TSH4 1004 aa18.58■□□□□ 0.57
Col16a1-201ENSMUST00000044565 Idi2Q8BFZ6 227 aa18.58■□□□□ 0.57
Col16a1-201ENSMUST00000044565 Gcc1Q9D4H2 778 aa18.58■□□□□ 0.57
Col16a1-201ENSMUST00000044565 Krt82Q99M74 516 aa18.58■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Rapgef4Q9EQZ6 1011 aa18.58■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Map4k4P97820 1233 aaKnown RBP18.58■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Tpm2P58774 284 aa18.57■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Trim34aQ99PP6 485 aa18.57■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Smc3Q9CW03 1217 aaKnown RBP18.57■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Sh3bgrQ9WUZ7 214 aa18.57■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Trim34bJ3QNR8 485 aa18.57■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Kif3aP28741 701 aa18.57■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Rusc2Q80U22 1514 aa18.57■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Larp1bA0A0A6YXJ7 370 aaKnown RBP18.56■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Nolc1E9Q5C9 702 aaKnown RBP18.56■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Phactr2B1AVP0 632 aa18.55■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Btbd11Q6GQW0 1109 aa18.55■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Tpm4Q6IRU2 248 aa18.55■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Elp1Q7TT37 1333 aaKnown RBP18.55■□□□□ 0.56
Col16a1-201ENSMUST00000044565 ChgaP26339 463 aaKnown RBP18.55■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Irx3P81067 507 aa18.55■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Lrrcc1Q69ZB0 1026 aa18.54■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Tpm3P21107 285 aaKnown RBP18.53■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Ints3Q7TPD0 1041 aaKnown RBP18.53■□□□□ 0.56
Col16a1-201ENSMUST00000044565 ApobrQ8VBT6 942 aa18.53■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Nek4Q9Z1J2 792 aa18.53■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Rhot2Q8JZN7 620 aa18.53■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Mapk8ip1Q9WVI9 707 aa18.53■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Prex2Q3LAC4 1598 aa18.53■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Atp7aQ64430 1491 aa18.53■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Ppp2r3aB2RXC8 1150 aa18.53■□□□□ 0.56
Col16a1-201ENSMUST00000044565 TimelessQ9R1X4 1197 aa18.53■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Me1P06801 572 aa18.52■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Tpm1P58771 284 aa18.52■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Nol11Q8BJW5 723 aaKnown RBP18.52■□□□□ 0.56
Col16a1-201ENSMUST00000044565 Magi3Q9EQJ9 1476 aa18.51■□□□□ 0.55
Col16a1-201ENSMUST00000044565 Rec8Q8C5S7 591 aa18.51■□□□□ 0.55
Col16a1-201ENSMUST00000044565 Trim29Q8R2Q0 587 aa18.51■□□□□ 0.55
Col16a1-201ENSMUST00000044565 Ccdc183A2AJB1 534 aa18.5■□□□□ 0.55
Col16a1-201ENSMUST00000044565 Ggnbp2Q5SV77 696 aa18.5■□□□□ 0.55
Col16a1-201ENSMUST00000044565 Hook1Q8BIL5 728 aa18.5■□□□□ 0.55
Col16a1-201ENSMUST00000044565 Odf2lQ9D478 642 aa18.5■□□□□ 0.55
Col16a1-201ENSMUST00000044565 RalgapbQ8BQZ4 1484 aa18.5■□□□□ 0.55
Col16a1-201ENSMUST00000044565 Znf710Q3U288 666 aa18.5■□□□□ 0.55
Col16a1-201ENSMUST00000044565 Farp2Q91VS8 1065 aa18.5■□□□□ 0.55
Col16a1-201ENSMUST00000044565 Odf2A3KGV1 830 aaKnown RBP18.5■□□□□ 0.55
Col16a1-201ENSMUST00000044565 Slc5a4bQ91ZP4 660 aa18.49■□□□□ 0.55
Col16a1-201ENSMUST00000044565 KarsQ99MN1 595 aaKnown RBP18.49■□□□□ 0.55
Col16a1-201ENSMUST00000044565 Dennd4bQ3U1Y4 1499 aa18.49■□□□□ 0.55
Col16a1-201ENSMUST00000044565 Rfx1P48377 963 aa18.49■□□□□ 0.55
Col16a1-201ENSMUST00000044565 TnikP83510 1323 aa18.49■□□□□ 0.55
Col16a1-201ENSMUST00000044565 Trappc8E9PWG2 1437 aa18.49■□□□□ 0.55
Col16a1-201ENSMUST00000044565 Cfap99A0A140LIX9 648 aa18.49■□□□□ 0.55
Col16a1-201ENSMUST00000044565 Hoxb7P09024 217 aa18.48■□□□□ 0.55
Col16a1-201ENSMUST00000044565 Ehmt1Q5DW34 1296 aa18.48■□□□□ 0.55
Col16a1-201ENSMUST00000044565 MsnP26041 577 aaKnown RBP18.48■□□□□ 0.55
Col16a1-201ENSMUST00000044565 1700010I14RikQ7TPG0 532 aa18.48■□□□□ 0.55
Col16a1-201ENSMUST00000044565 GnpatP98192 678 aa18.48■□□□□ 0.55
Col16a1-201ENSMUST00000044565 Agtpbp1Q641K1 1218 aa18.48■□□□□ 0.55
Col16a1-201ENSMUST00000044565 Dmrt2Q8BG36 561 aa18.48■□□□□ 0.55
Col16a1-201ENSMUST00000044565 Naip5Q9R016 1403 aa18.48■□□□□ 0.55
Col16a1-201ENSMUST00000044565 AnlnQ8K298 1121 aaKnown RBP18.47■□□□□ 0.55
Col16a1-201ENSMUST00000044565 Bicd2Q921C5 820 aa18.47■□□□□ 0.55
Col16a1-201ENSMUST00000044565 Ipo7Q9EPL8 1038 aaKnown RBP18.47■□□□□ 0.55
Col16a1-201ENSMUST00000044565 Tubb6Q922F4 447 aa18.47■□□□□ 0.55
Col16a1-201ENSMUST00000044565 Stk3Q9JI10 497 aa18.46■□□□□ 0.55
Col16a1-201ENSMUST00000044565 MvpQ9EQK5 861 aa18.46■□□□□ 0.55
Col16a1-201ENSMUST00000044565 Ncoa1P70365 1447 aa18.46■□□□□ 0.55
Col16a1-201ENSMUST00000044565 Isy1Q69ZQ2 285 aaKnown RBP18.46■□□□□ 0.54
Col16a1-201ENSMUST00000044565 Talpid3E9PV87 1520 aa18.45■□□□□ 0.54
Col16a1-201ENSMUST00000044565 Naip6Q9JIB6 1403 aa18.45■□□□□ 0.54
Col16a1-201ENSMUST00000044565 Gsdma2Q32M21 443 aa18.45■□□□□ 0.54
Col16a1-201ENSMUST00000044565 Cwc27Q3TKY6 469 aa18.45■□□□□ 0.54
Col16a1-201ENSMUST00000044565 Gpatch3Q8BIY1 525 aa18.45■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 17.1 ms