RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 NefhP19246 1090 aa12.06□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Ppp6r1Q7TSI3 856 aa12.06□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Cbx1P83917 185 aaKnown RBP12.06□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Ecm2Q5FW85 670 aa12.06□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Krt82Q99M74 516 aa12.06□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Nphp1Q9QY53 687 aa12.06□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Ift57Q8BXG3 429 aa12.06□□□□□ -0.48
Ubr1-201ENSMUST00000028728 MicalclQ9D5U9 680 aa12.06□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Gsto1O09131 240 aa12.06□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Nutm1Q8BHP2 1126 aa12.06□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Cep57l1Q8VDS7 400 aa12.06□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Phlpp2Q8BXA7 1320 aa12.06□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Cfap58B2RW38 873 aa12.05□□□□□ -0.48
Ubr1-201ENSMUST00000028728 HdgfP51859 237 aaKnown RBP12.05□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Trim29Q8R2Q0 587 aa12.05□□□□□ -0.48
Ubr1-201ENSMUST00000028728 TchhA0A0B4J1F9 1599 aa12.05□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Gnai2P08752 355 aaKnown RBP12.05□□□□□ -0.48
Ubr1-201ENSMUST00000028728 CarsQ9ER72 831 aaKnown RBP12.05□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Cnnm3Q32NY4 713 aa12.05□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Wdr33Q8K4P0 1330 aaKnown RBP12.05□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Terf2O35144 541 aa12.05□□□□□ -0.48
Ubr1-201ENSMUST00000028728 HmmrQ00547 794 aaKnown RBP12.05□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Txndc2Q6P902 515 aa12.05□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Zfp644E9QA22 1323 aa12.04□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Pip4k2aO70172 405 aa12.04□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Map4k4P97820 1233 aaKnown RBP12.04□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Podxl2Q8CAE9 603 aa12.04□□□□□ -0.48
Ubr1-201ENSMUST00000028728 AppP12023 770 aa12.04□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Cd109Q8R422 1442 aa12.04□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Puf60Q3UEB3 564 aaKnown RBP12.04□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Mctp1E9PV86 951 aa12.04□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Fchsd2Q3USJ8 740 aa12.04□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Paxbp1P58501 919 aa12.03□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Ddx19aQ61655 478 aaKnown RBP12.03□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Stk38Q91VJ4 465 aa12.03□□□□□ -0.48
Ubr1-201ENSMUST00000028728 CenpqQ9CPQ5 267 aa12.03□□□□□ -0.48
Ubr1-201ENSMUST00000028728 4931400O07RikQ9D4M5 137 aa12.03□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Gsdma3Q5Y4Y6 464 aa12.03□□□□□ -0.48
Ubr1-201ENSMUST00000028728 MvpQ9EQK5 861 aa12.03□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Asxl1P59598 1514 aa12.03□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Nucb2P81117 420 aa12.03□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Tbc1d32Q3URV1 1296 aa12.03□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Gtf3c5Q8R2T8 520 aa12.03□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Ap3b2Q9JME5 1082 aa12.03□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Cc2d2aQ8CFW7 1633 aa12.03□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Tfip11Q9ERA6 838 aaKnown RBP12.03□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Sass6Q80UK7 654 aa12.02□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Kri1Q8VDQ9 704 aaKnown RBP12.02□□□□□ -0.48
Ubr1-201ENSMUST00000028728 DroshaQ5HZJ0 1373 aaKnown RBP12.02□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Naip2Q9QUK4 1447 aa12.02□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Cabp4Q8VHC5 271 aa12.02□□□□□ -0.48
Ubr1-201ENSMUST00000028728 Stk11ipQ3TAA7 1072 aa12.02□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Eif3aP23116 1344 aaKnown RBP12.02□□□□□ -0.49
Ubr1-201ENSMUST00000028728 PrxO55103 1391 aa12.02□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Pde4cQ3UEI1 686 aa12.02□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Mink1Q9JM52 1308 aa12.02□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Kiaa0753Q6A000 959 aa12.02□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Slu7Q8BHJ9 585 aa12.02□□□□□ -0.49
Ubr1-201ENSMUST00000028728 LarsQ8BMJ2 1178 aa12.02□□□□□ -0.49
Ubr1-201ENSMUST00000028728 TxlnbQ8VBT1 685 aa12.02□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Jakmip1Q8BVL9 626 aa12.01□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Arid3cA6PWV5 409 aa12.01□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Dhx16G3X8X0 1044 aaKnown RBP12.01□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Gm1043A0A140LJC2 1431 aa12.01□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Naip5Q9R016 1403 aa12.01□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Shq1Q7TMX5 569 aa12.01□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Sos1Q62245 1319 aa12.01□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Apaf1O88879 1249 aa12.01□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Bag4Q8CI61 457 aa12.01□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Anapc15-psA0A140T8L6 141 aa12.01□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Cfdp1O88271 295 aaKnown RBP12.01□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Q8C5K5 320 aa12.01□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Fam193aQ8CGI1 1231 aaKnown RBP12.01□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Rhot2Q8JZN7 620 aa12.01□□□□□ -0.49
Ubr1-201ENSMUST00000028728 SelenooQ9DBC0 667 aa12.01□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Ttll5Q8CHB8 1328 aa12.01□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Odf2A3KGV1 830 aaKnown RBP12□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Arid4aF8VPQ2 1261 aaKnown RBP12□□□□□ -0.49
Ubr1-201ENSMUST00000028728 A0A0U1RNP2 1173 aa12□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Me1P06801 572 aa11.99□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Samm50Q8BGH2 469 aa11.99□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Tspyl2Q7TQI8 677 aa11.99□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Aldh1l1Q8R0Y6 902 aa11.99□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Luc7lQ9CYI4 371 aaKnown RBP11.99□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Strn4P58404 760 aa11.99□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Mroh2bQ7M6Y6 1581 aa11.98□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Zkscan7E9PVW1 718 aa11.98□□□□□ -0.49
Ubr1-201ENSMUST00000028728 ItpripQ3TNL8 555 aa11.98□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Ccdc94Q9D6J3 314 aa11.98□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Dhx9O70133 1380 aaKnown RBP11.98□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Rfx7F8VPJ6 1459 aa11.98□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Top1mtQ8R4U6 593 aa11.98□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Sox12Q04890 314 aa11.97□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Odf2lQ9D478 642 aa11.97□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Maco1Q7TQE6 664 aaKnown RBP11.97□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Tubb4aQ9D6F9 444 aa11.97□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Stk3Q9JI10 497 aa11.97□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Neurod6P48986 337 aa11.96□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Abcf1Q6P542 837 aaKnown RBP11.96□□□□□ -0.49
Ubr1-201ENSMUST00000028728 Erlin2Q8BFZ9 340 aa11.96□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms