RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 RTN3O95197 1032 aaPredicted RBP17.79■□□□□ 0.44
PHGDH-234ENST00000642041 FGFR3P22607 806 aa17.79■□□□□ 0.44
PHGDH-234ENST00000642041 ACAT1P24752 427 aaKnown RBP17.79■□□□□ 0.44
PHGDH-234ENST00000642041 CNR2P34972 360 aa17.79■□□□□ 0.44
PHGDH-234ENST00000642041 HSPA9P38646 679 aaKnown RBP17.79■□□□□ 0.44
PHGDH-234ENST00000642041 HCAR3P49019 387 aa17.79■□□□□ 0.44
PHGDH-234ENST00000642041 CARSP49589 748 aaKnown RBP17.79■□□□□ 0.44
PHGDH-234ENST00000642041 CCR3P51677 355 aa17.79■□□□□ 0.44
PHGDH-234ENST00000642041 CDH6P55285 790 aa17.79■□□□□ 0.44
PHGDH-234ENST00000642041 AASDHQ4L235 1098 aaPredicted RBP17.79■□□□□ 0.44
PHGDH-234ENST00000642041 LRIG3Q6UXM1 1119 aa17.79■□□□□ 0.44
PHGDH-234ENST00000642041 GSTA5Q7RTV2 222 aa17.79■□□□□ 0.44
PHGDH-234ENST00000642041 CASKIN2Q8WXE0 1202 aa17.79■□□□□ 0.44
PHGDH-234ENST00000642041 P3H4Q92791 437 aa17.79■□□□□ 0.44
PHGDH-234ENST00000642041 MYLPFQ96A32 169 aa17.79■□□□□ 0.44
PHGDH-234ENST00000642041 PKMYT1Q99640 499 aa17.79■□□□□ 0.44
PHGDH-234ENST00000642041 KXD1Q9BQD3 176 aa17.79■□□□□ 0.44
PHGDH-234ENST00000642041 FRMD8Q9BZ67 464 aaPredicted RBP17.79■□□□□ 0.44
PHGDH-234ENST00000642041 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.79■□□□□ 0.44
PHGDH-234ENST00000642041 CHST7Q9NS84 486 aa17.79■□□□□ 0.44
PHGDH-234ENST00000642041 ZNF446Q9NWS9 450 aa17.79■□□□□ 0.44
PHGDH-234ENST00000642041 FNIP2Q9P278 1114 aa17.79■□□□□ 0.44
PHGDH-234ENST00000642041 ZNF148Q9UQR1 794 aa17.79■□□□□ 0.44
PHGDH-234ENST00000642041 USP3Q9Y6I4 520 aa17.79■□□□□ 0.44
PHGDH-234ENST00000642041 DMXL2Q8TDJ6 3036 aa17.79■□□□□ 0.44
PHGDH-234ENST00000642041 GOLGA6BA6NDN3 693 aa17.78■□□□□ 0.44
PHGDH-234ENST00000642041 F8W810 466 aa17.78■□□□□ 0.44
PHGDH-234ENST00000642041 LIASO43766 372 aa17.78■□□□□ 0.44
PHGDH-234ENST00000642041 KCNK5O95279 499 aa17.78■□□□□ 0.44
PHGDH-234ENST00000642041 LTFP02788 710 aa17.78■□□□□ 0.44
PHGDH-234ENST00000642041 ATF2P15336 505 aa17.78■□□□□ 0.44
PHGDH-234ENST00000642041 RPL10AP62906 217 aaKnown RBP17.78■□□□□ 0.44
PHGDH-234ENST00000642041 NTHL1P78549 312 aa17.78■□□□□ 0.44
PHGDH-234ENST00000642041 CREMQ03060 361 aa17.78■□□□□ 0.44
PHGDH-234ENST00000642041 FAM171A1Q5VUB5 890 aa17.78■□□□□ 0.44
PHGDH-234ENST00000642041 SCYL2Q6P3W7 929 aa17.78■□□□□ 0.44
PHGDH-234ENST00000642041 DEFB106AQ8N104 65 aa17.78■□□□□ 0.44
PHGDH-234ENST00000642041 FAF2Q96CS3 445 aa17.78■□□□□ 0.44
PHGDH-234ENST00000642041 CCDC114Q96M63 670 aa17.78■□□□□ 0.44
PHGDH-234ENST00000642041 RNF157Q96PX1 679 aa17.78■□□□□ 0.44
PHGDH-234ENST00000642041 CDK5RAP1Q96SZ6 601 aaKnown RBP17.78■□□□□ 0.44
PHGDH-234ENST00000642041 NPY6RQ99463 290 aa17.78■□□□□ 0.44
PHGDH-234ENST00000642041 SMOQ99835 787 aa17.78■□□□□ 0.44
PHGDH-234ENST00000642041 CALN1Q9BXU9 219 aa17.78■□□□□ 0.44
PHGDH-234ENST00000642041 BRD8Q9H0E9 1235 aa17.78■□□□□ 0.44
PHGDH-234ENST00000642041 GREB1Q4ZG55 1949 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 GOLGA6L10A6NI86 522 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 C3orf70A6NLC5 250 aaPredicted RBP17.77■□□□□ 0.44
PHGDH-234ENST00000642041 H3BRJ5 948 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 DAPK3O43293 454 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 CST8O60676 142 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 ATP2C2O75185 946 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 GJB6O95452 261 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 SLC2A3P11169 496 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 IGFBP6P24592 240 aaPredicted RBP17.77■□□□□ 0.44
PHGDH-234ENST00000642041 TKTP29401 623 aaKnown RBP17.77■□□□□ 0.44
PHGDH-234ENST00000642041 GJC1P36383 396 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 SCAPQ12770 1279 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 USP41Q3LFD5 358 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 CTXN3Q4LDR2 81 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 EFHC2Q5JST6 749 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 BNIPLQ7Z465 357 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 ADAT2Q7Z6V5 191 aaKnown RBP17.77■□□□□ 0.44
PHGDH-234ENST00000642041 TADA2BQ86TJ2 420 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 MON1AQ86VX9 555 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 RFX6Q8HWS3 928 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 ARFGAP1Q8N6T3 406 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 SLC35B2Q8TB61 432 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 RAPGEF5Q92565 580 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 CFAP57Q96MR6 1250 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 TTPALQ9BTX7 342 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 HEMGNQ9BXL5 484 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 PCDH9Q9HC56 1237 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 HEBP1Q9NRV9 189 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 TJP2Q9UDY2 1190 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 ASIC3Q9UHC3 531 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 PCSK1NQ9UHG2 260 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 LHX6Q9UPM6 363 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 TIMM13Q9Y5L4 95 aaPredicted RBP17.77■□□□□ 0.44
PHGDH-234ENST00000642041 BACE2Q9Y5Z0 518 aa17.77■□□□□ 0.44
PHGDH-234ENST00000642041 SRRM3A6NNA2 597 aaPredicted RBP17.76■□□□□ 0.43
PHGDH-234ENST00000642041 HACD1B0YJ81 288 aa17.76■□□□□ 0.43
PHGDH-234ENST00000642041 TULP2O00295 520 aa17.76■□□□□ 0.43
PHGDH-234ENST00000642041 MAN2B1O00754 1011 aa17.76■□□□□ 0.43
PHGDH-234ENST00000642041 APOL1O14791 398 aa17.76■□□□□ 0.43
PHGDH-234ENST00000642041 HNRNPA1P09651 372 aaKnown RBP eCLIP17.76■□□□□ 0.43
PHGDH-234ENST00000642041 GRIK1P39086 918 aa17.76■□□□□ 0.43
PHGDH-234ENST00000642041 ADCY8P40145 1251 aa17.76■□□□□ 0.43
PHGDH-234ENST00000642041 SULT1E1P49888 294 aa17.76■□□□□ 0.43
PHGDH-234ENST00000642041 ARSEP51690 589 aa17.76■□□□□ 0.43
PHGDH-234ENST00000642041 ATP11AP98196 1134 aa17.76■□□□□ 0.43
PHGDH-234ENST00000642041 DEUP1Q05D60 604 aa17.76■□□□□ 0.43
PHGDH-234ENST00000642041 RING1Q06587 406 aa17.76■□□□□ 0.43
PHGDH-234ENST00000642041 GPR17Q13304 367 aa17.76■□□□□ 0.43
PHGDH-234ENST00000642041 DCAF6Q58WW2 860 aa17.76■□□□□ 0.43
PHGDH-234ENST00000642041 BRMS1LQ5PSV4 323 aa17.76■□□□□ 0.43
PHGDH-234ENST00000642041 TRMT10CQ7L0Y3 403 aaKnown RBP17.76■□□□□ 0.43
PHGDH-234ENST00000642041 NUP93Q8N1F7 819 aa17.76■□□□□ 0.43
PHGDH-234ENST00000642041 ITFG1Q8TB96 612 aa17.76■□□□□ 0.43
PHGDH-234ENST00000642041 C1orf54Q8WWF1 131 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms