RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 RAB34Q9BZG1 259 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 RUBCNLQ9H714 662 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 RIMKLBQ9ULI2 386 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 APOBEC2Q9Y235 224 aaKnown RBP12.33□□□□□ -0.44
SPIDR-217ENST00000522117 NOSIPQ9Y314 301 aaKnown RBP12.33□□□□□ -0.44
SPIDR-217ENST00000522117 IQANK1A0A1B0GTG1 560 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 SMCO2A6NFE2 343 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 MATN1P21941 496 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 MAP4P27816 1152 aaKnown RBP12.33□□□□□ -0.44
SPIDR-217ENST00000522117 NAPAP54920 295 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 GALK2Q01415 458 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 ITPK1Q13572 414 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 NHSL2Q5HYW2 709 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 HYIQ5T013 277 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 UGT3A1Q6NUS8 523 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 PCGF5Q86SE9 256 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 NUDCD3Q8IVD9 361 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 EPS8L1Q8TE68 723 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 FAM89AQ96GI7 184 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 FERD3LQ96RJ6 166 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 RTKNQ9BST9 563 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 TMEM121Q9BTD3 319 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 SEMA6AQ9H2E6 1030 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 VRTNQ9H8Y1 702 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 AKIP1Q9NQ31 210 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 CICQ96RK0 1608 aaPredicted RBP12.33□□□□□ -0.44
SPIDR-217ENST00000522117 CROCCQ5TZA2 2017 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 C19orf81C9J6K1 198 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 AURKAO14965 403 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 AKAP10O43572 662 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 COL6A1P12109 1028 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 GZMAP12544 262 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 CD1EP15812 388 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 COPZ1P61923 177 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 GBE1Q04446 702 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 NIPAL4Q0D2K0 466 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 PIGGQ5H8A4 983 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 PDPK2PQ6A1A2 396 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 ZCCHC23Q6ZST2 131 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 HAUS6Q7Z4H7 955 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 PGBD4Q96DM1 585 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 CIB1Q99828 191 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 NOL6Q9H6R4 1146 aaKnown RBP12.32□□□□□ -0.44
SPIDR-217ENST00000522117 GREM2Q9H772 168 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 SLC38A10Q9HBR0 1119 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 WDR70Q9NW82 654 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 SNTG2Q9NY99 539 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 PRPF19Q9UMS4 504 aaKnown RBP12.32□□□□□ -0.44
SPIDR-217ENST00000522117 SHOC2Q9UQ13 582 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 NUP98P52948 1817 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 MAGEB6P1A0A0J9YX57 407 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 SGPL1O95470 568 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 CYP19A1P11511 503 aaPredicted RBP12.32□□□□□ -0.44
SPIDR-217ENST00000522117 CDH1P12830 882 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 NCAM1P13591 858 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 POLR2CP19387 275 aaPredicted RBP12.32□□□□□ -0.44
SPIDR-217ENST00000522117 IDH3AP50213 366 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 ECT2LQ008S8 904 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 MRPL28Q13084 256 aaKnown RBP12.32□□□□□ -0.44
SPIDR-217ENST00000522117 HIF1AQ16665 826 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 TTC33Q6PID6 262 aaPredicted RBP12.32□□□□□ -0.44
SPIDR-217ENST00000522117 MAMDC4Q6UXC1 1216 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 NT5DC4Q86YG4 428 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 TFAP2CQ92754 450 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 DLG3Q92796 817 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 GJA10Q969M2 543 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 CNDP2Q96KP4 475 aaKnown RBP12.32□□□□□ -0.44
SPIDR-217ENST00000522117 RIOK1Q9BRS2 568 aaKnown RBP12.32□□□□□ -0.44
SPIDR-217ENST00000522117 SLC13A1Q9BZW2 595 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 IKZF4Q9H2S9 585 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 STN1Q9H668 368 aaKnown RBP12.32□□□□□ -0.44
SPIDR-217ENST00000522117 QTRT2Q9H974 415 aaKnown RBP12.32□□□□□ -0.44
SPIDR-217ENST00000522117 DOT1LQ8TEK3 1739 aa12.32□□□□□ -0.44
SPIDR-217ENST00000522117 NOP56O00567 594 aaKnown RBP12.31□□□□□ -0.44
SPIDR-217ENST00000522117 LIASO43766 372 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 SLITRK3O94933 977 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 GNAO1P09471 354 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 HOXC13P31276 330 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 RFC1P35251 1148 aaPredicted RBP12.31□□□□□ -0.44
SPIDR-217ENST00000522117 TSPAN7P41732 249 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 STX1BP61266 288 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 PRAMEP78395 509 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 PRKCQQ04759 706 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 TNK2Q07912 1038 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 GALNT1Q10472 559 aaPredicted RBP12.31□□□□□ -0.44
SPIDR-217ENST00000522117 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.31□□□□□ -0.44
SPIDR-217ENST00000522117 DGLUCYQ7Z3D6 616 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 HERC6Q8IVU3 1022 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 LMO3Q8TAP4 145 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 PDCD6IPQ8WUM4 868 aaKnown RBP12.31□□□□□ -0.44
SPIDR-217ENST00000522117 RMDN1Q96DB5 314 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 CSF3RQ99062 836 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 ATP13A3Q9H7F0 1226 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 POLMQ9NP87 494 aaPredicted RBP12.31□□□□□ -0.44
SPIDR-217ENST00000522117 NOCTQ9UK39 431 aaKnown RBP12.31□□□□□ -0.44
SPIDR-217ENST00000522117 DNPEPQ9ULA0 475 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 KIAA1024Q9UPX6 916 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 ZHX2Q9Y6X8 837 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 SPATA31A6Q5VVP1 1343 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 ARAP2Q8WZ64 1704 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms