RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 CCINQ13939 588 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 SIM2Q14190 667 aaPredicted RBP10.78□□□□□ -0.68
COL5A1-202ENST00000371820 EML3Q32P44 896 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 CBWD6Q4V339 395 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 CBWD3Q5JTY5 395 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 CBWD5Q5RIA9 395 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 DUPD1Q68J44 220 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 MMS22LQ6ZRQ5 1243 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 PRR23BQ6ZRT6 265 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 CLEC20AQ6ZU45 233 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 LONP2Q86WA8 852 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 ANKS4BQ8N8V4 417 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 ZMIZ2Q8NF64 920 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 SCAMP5Q8TAC9 235 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 RIN3Q8TB24 985 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 GRK7Q8WTQ7 553 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 SEMA4DQ92854 862 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 CD101Q93033 1021 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 OTUB2Q96DC9 234 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 TMEM176AQ96HP8 235 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 HEXIM2Q96MH2 286 aaKnown RBP10.78□□□□□ -0.68
COL5A1-202ENST00000371820 NT5C1BQ96P26 610 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 TWNKQ96RR1 684 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 CCT8L2Q96SF2 557 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 CDK5RAP1Q96SZ6 601 aaKnown RBP10.78□□□□□ -0.68
COL5A1-202ENST00000371820 P2RY13Q9BPV8 354 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 RTKNQ9BST9 563 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 SYT11Q9BT88 431 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 DUSP16Q9BY84 665 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 FOXP3Q9BZS1 431 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 PABPC3Q9H361 631 aaKnown RBP10.78□□□□□ -0.68
COL5A1-202ENST00000371820 CISHQ9NSE2 258 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 TMEM30AQ9NV96 361 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 C2orf42Q9NWW7 574 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 GMIPQ9P107 970 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 SCML2Q9UQR0 700 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 E2F8A0AVK6 867 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 H0YHG0 523 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 DDX3YO15523 660 aaKnown RBP10.77□□□□□ -0.69
COL5A1-202ENST00000371820 COCHO43405 550 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 HRO43593 1189 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 BUB1BO60566 1050 aaPredicted RBP10.77□□□□□ -0.69
COL5A1-202ENST00000371820 TLR5O60602 858 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 ADH1CP00326 375 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 AGTP01019 485 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 KRT14P02533 472 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 FTLP02792 175 aaPredicted RBP10.77□□□□□ -0.69
COL5A1-202ENST00000371820 FAM153BP0C7A2 387 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 ZDHHC11BP0C7U3 371 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 ACO1P21399 889 aaKnown RBP10.77□□□□□ -0.69
COL5A1-202ENST00000371820 HOXA6P31267 233 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 SLC1A1P43005 524 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 FNTAP49354 379 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 DHX9Q08211 1270 aaKnown RBP10.77□□□□□ -0.69
COL5A1-202ENST00000371820 SRSF5Q13243 272 aaKnown RBP10.77□□□□□ -0.69
COL5A1-202ENST00000371820 CUL2Q13617 745 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 FAM153CQ494X1 144 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 PREPLQ4J6C6 727 aaPredicted RBP10.77□□□□□ -0.69
COL5A1-202ENST00000371820 ZNF394Q53GI3 561 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 PPP1R26Q5T8A7 1209 aaPredicted RBP10.77□□□□□ -0.69
COL5A1-202ENST00000371820 GKAP1Q5VSY0 366 aaPredicted RBP10.77□□□□□ -0.69
COL5A1-202ENST00000371820 DENND2CQ68D51 928 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 ARHGAP17Q68EM7 881 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 CCDC121Q6ZUS5 278 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 TRMT10CQ7L0Y3 403 aaKnown RBP10.77□□□□□ -0.69
COL5A1-202ENST00000371820 TMC3Q7Z5M5 1100 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 ARHGAP18Q8N392 663 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 ZNF473Q8WTR7 871 aaKnown RBP10.77□□□□□ -0.69
COL5A1-202ENST00000371820 ACDQ96AP0 544 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 RNF38Q9H0F5 515 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 NSRP1Q9H0G5 558 aaKnown RBP10.77□□□□□ -0.69
COL5A1-202ENST00000371820 UBE2TQ9NPD8 197 aaPredicted RBP10.77□□□□□ -0.69
COL5A1-202ENST00000371820 SMPD4Q9NXE4 827 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 CTTNBP2NLQ9P2B4 639 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 CFAP97Q9P2B7 532 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 HESX1Q9UBX0 185 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 CHORDC1Q9UHD1 332 aaPredicted RBP10.77□□□□□ -0.69
COL5A1-202ENST00000371820 FAM153AQ9UHL3 310 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 LSM7Q9UK45 103 aaKnown RBP10.77□□□□□ -0.69
COL5A1-202ENST00000371820 KIAA1257Q9ULG3 409 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 ALG6Q9Y672 507 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 NFS1Q9Y697 457 aa10.77□□□□□ -0.69
COL5A1-202ENST00000371820 MYO16Q9Y6X6 1858 aa10.76□□□□□ -0.69
COL5A1-202ENST00000371820 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.76□□□□□ -0.69
COL5A1-202ENST00000371820 E7EVH7 732 aa10.76□□□□□ -0.69
COL5A1-202ENST00000371820 DAPK3O43293 454 aa10.76□□□□□ -0.69
COL5A1-202ENST00000371820 BEST1O76090 585 aa10.76□□□□□ -0.69
COL5A1-202ENST00000371820 RALAP11233 206 aa10.76□□□□□ -0.69
COL5A1-202ENST00000371820 RARGP13631 454 aa10.76□□□□□ -0.69
COL5A1-202ENST00000371820 ITIH2P19823 946 aa10.76□□□□□ -0.69
COL5A1-202ENST00000371820 ATP5C1P36542 298 aaKnown RBP10.76□□□□□ -0.69
COL5A1-202ENST00000371820 EIF2DP41214 584 aaKnown RBP10.76□□□□□ -0.69
COL5A1-202ENST00000371820 PMS2P54278 862 aa10.76□□□□□ -0.69
COL5A1-202ENST00000371820 BCAT1P54687 386 aa10.76□□□□□ -0.69
COL5A1-202ENST00000371820 RAD23BP54727 409 aa10.76□□□□□ -0.69
COL5A1-202ENST00000371820 RWDD2BP57060 319 aa10.76□□□□□ -0.69
COL5A1-202ENST00000371820 RNASE9P60153 205 aaKnown RBP10.76□□□□□ -0.69
COL5A1-202ENST00000371820 CALCOCO2Q13137 446 aa10.76□□□□□ -0.69
COL5A1-202ENST00000371820 CYP1B1Q16678 543 aa10.76□□□□□ -0.69
COL5A1-202ENST00000371820 SGO2Q562F6 1265 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms