RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 FIZ1Q96SL8 496 aa11.51□□□□□ -0.57
PTP4A1-207ENST00000639568 KRT82Q9NSB4 513 aa11.51□□□□□ -0.57
PTP4A1-207ENST00000639568 SEPT10Q9P0V9 454 aa11.51□□□□□ -0.57
PTP4A1-207ENST00000639568 SERGEFQ9UGK8 458 aa11.51□□□□□ -0.57
PTP4A1-207ENST00000639568 FZD4Q9ULV1 537 aa11.51□□□□□ -0.57
PTP4A1-207ENST00000639568 A0A1W2PNU3 283 aaPredicted RBP11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 NEMP2A6NFY4 417 aa11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 MID1O15344 667 aa11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 EPB41L2O43491 1005 aaKnown RBP11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 HMBSP08397 361 aa11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 DLDP09622 509 aaKnown RBP11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 CORO1AP31146 461 aaKnown RBP11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 CASRP41180 1078 aa11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 HARS2P49590 506 aaKnown RBP11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 ST8SIA6P61647 398 aa11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 SURF1Q15526 300 aa11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 CST6Q15828 149 aa11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 ME3Q16798 604 aa11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 TMEM119Q4V9L6 283 aa11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 RBM44Q6ZP01 1051 aaKnown RBP11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 ZNF720Q7Z2F6 126 aa11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 DENND1CQ8IV53 801 aa11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 ZSWIM2Q8NEG5 633 aa11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 OR5B17Q8NGF7 314 aa11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 ARRDC3Q96B67 414 aa11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 CALML4Q96GE6 196 aa11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 PRR11Q96HE9 360 aaPredicted RBP11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 TNIP3Q96KP6 325 aa11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 ACCSQ96QU6 501 aa11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 CDK5RAP1Q96SZ6 601 aaKnown RBP11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 UCKL1Q9NWZ5 548 aa11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 OSER1Q9NX31 292 aa11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 NAGPAQ9UK23 515 aa11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 AGO1Q9UL18 857 aaKnown RBP11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 SCML2Q9UQR0 700 aa11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 NME7Q9Y5B8 376 aa11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 ENTPD2Q9Y5L3 495 aa11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 NUMA1Q14980 2115 aa11.5□□□□□ -0.57
PTP4A1-207ENST00000639568 A0A1W2PQH9 124 aa11.49□□□□□ -0.57
PTP4A1-207ENST00000639568 LZTS3O60299 673 aaPredicted RBP11.49□□□□□ -0.57
PTP4A1-207ENST00000639568 CLSTN1O94985 981 aa11.49□□□□□ -0.57
PTP4A1-207ENST00000639568 RALAP11233 206 aa11.49□□□□□ -0.57
PTP4A1-207ENST00000639568 POLR2EP19388 210 aaKnown RBP11.49□□□□□ -0.57
PTP4A1-207ENST00000639568 TGM2P21980 687 aa11.49□□□□□ -0.57
PTP4A1-207ENST00000639568 GARTP22102 1010 aa11.49□□□□□ -0.57
PTP4A1-207ENST00000639568 MAP3K7CLP57077 242 aa11.49□□□□□ -0.57
PTP4A1-207ENST00000639568 MPPE1Q53F39 396 aa11.49□□□□□ -0.57
PTP4A1-207ENST00000639568 MANEAQ5SRI9 462 aa11.49□□□□□ -0.57
PTP4A1-207ENST00000639568 SND1Q7KZF4 910 aaKnown RBP eCLIP11.49□□□□□ -0.57
PTP4A1-207ENST00000639568 DYMQ7RTS9 669 aa11.49□□□□□ -0.57
PTP4A1-207ENST00000639568 ATCAYQ86WG3 371 aa11.49□□□□□ -0.57
PTP4A1-207ENST00000639568 SKAP1Q86WV1 359 aa11.49□□□□□ -0.57
PTP4A1-207ENST00000639568 JAMLQ86YT9 394 aa11.49□□□□□ -0.57
PTP4A1-207ENST00000639568 AHI1Q8N157 1196 aa11.49□□□□□ -0.57
PTP4A1-207ENST00000639568 RASSF8Q8NHQ8 419 aa11.49□□□□□ -0.57
PTP4A1-207ENST00000639568 TPCN2Q8NHX9 752 aa11.49□□□□□ -0.57
PTP4A1-207ENST00000639568 SPATA20Q8TB22 786 aa11.49□□□□□ -0.57
PTP4A1-207ENST00000639568 DUSP23Q9BVJ7 150 aa11.49□□□□□ -0.57
PTP4A1-207ENST00000639568 ADNPQ9H2P0 1102 aa11.49□□□□□ -0.57
PTP4A1-207ENST00000639568 PCIF1Q9H4Z3 704 aa11.49□□□□□ -0.57
PTP4A1-207ENST00000639568 MRPL44Q9H9J2 332 aaKnown RBP11.49□□□□□ -0.57
PTP4A1-207ENST00000639568 TMPRSS4Q9NRS4 437 aa11.49□□□□□ -0.57
PTP4A1-207ENST00000639568 ABCB8Q9NUT2 735 aa11.49□□□□□ -0.57
PTP4A1-207ENST00000639568 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.49□□□□□ -0.57
PTP4A1-207ENST00000639568 NLGN3Q9NZ94 848 aa11.49□□□□□ -0.57
PTP4A1-207ENST00000639568 ANAPC2Q9UJX6 822 aa11.49□□□□□ -0.57
PTP4A1-207ENST00000639568 C2CD3Q4AC94 2353 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 CCDC187A0A096LP49 1063 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 CPED1A4D0V7 1026 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 PMS2P1A4D2B8 440 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 VWA3AA6NCI4 1184 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 LATO43561 262 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 GOT1P17174 413 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 ELAVL4P26378 380 aaKnown RBP11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 HLA-FP30511 346 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 SLC5A2P31639 672 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 SLC8A1P32418 973 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 NUDT1P36639 197 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 ADPRHP54922 357 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 EHHADHQ08426 723 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 MORC3Q14149 939 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 CLCA4Q14CN2 919 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 TGIF1Q15583 401 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 KMT5BQ4FZB7 885 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 MBLAC2Q68D91 279 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 PAQR9Q6ZVX9 377 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 TRAPPC11Q7Z392 1133 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 ADIPOR2Q86V24 386 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 MMAAQ8IVH4 418 aaKnown RBP11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 CPXM2Q8N436 756 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 KLHDC7BQ96G42 594 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 NCKIPSDQ9NZQ3 722 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 RASAL2Q9UJF2 1139 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 GGA2Q9UJY4 613 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 DMTF1Q9Y222 760 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 PCDHGA4Q9Y5G9 962 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 BSNQ9UPA5 3926 aa11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 SPTBN1Q01082 2364 aaKnown RBP11.48□□□□□ -0.57
PTP4A1-207ENST00000639568 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 ZNF233A6NK53 670 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms