RNA–Protein interactions for RNA: ENST00000637613.1

CHD2-228, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-228	ENST00000637613	HAUS2	Q9NVX0	235 aa		4.09	□□□□□ -1.75
CHD2-228	ENST00000637613	HCN3	Q9P1Z3	774 aa		4.09	□□□□□ -1.75
CHD2-228	ENST00000637613	TRPC5	Q9UL62	973 aa	Predicted RBP	4.09	□□□□□ -1.75
CHD2-228	ENST00000637613	GABRQ	Q9UN88	632 aa		4.09	□□□□□ -1.75
CHD2-228	ENST00000637613	ENTPD2	Q9Y5L3	495 aa		4.09	□□□□□ -1.75
CHD2-228	ENST00000637613	SYNDIG1L	A6NDD5	238 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	NPEPPSL1	A6NEC2	478 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	AGAP5	A6NIR3	686 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	MASP2	O00187	686 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	PPM1D	O15297	605 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	SPRY2	O43597	315 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	RECQL4	O94761	1208 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	VNN1	O95497	513 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	DNTT	P04053	509 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	RPN1	P04843	607 aa	Known RBP	4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	NR2F1	P10589	423 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	MCM5	P33992	734 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	ACTN2	P35609	894 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	PAFAH1B1	P43034	410 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	XDH	P47989	1333 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	VAV2	P52735	878 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	RCAN1	P53805	252 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	INHBC	P55103	352 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	CREB5	Q02930	508 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	MPP3	Q13368	585 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	GEN1	Q17RS7	908 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	DUSP28	Q4G0W2	176 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	KRTAP5-11	Q6L8G4	156 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	MAMDC4	Q6UXC1	1216 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	ATF7IP	Q6VMQ6	1270 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613		Q6ZSN1	163 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	POLN	Q7Z5Q5	900 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	CPLX4	Q7Z7G2	160 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	ZNF366	Q8N895	744 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	KCNG4	Q8TDN1	519 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	GLMP	Q8WWB7	406 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	CUL5	Q93034	780 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	SH3GLB2	Q9NR46	395 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	DIAPH3	Q9NSV4	1193 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	SEPT11	Q9NVA2	429 aa	Known RBP	4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	INTS13	Q9NVM9	706 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	DKK2	Q9UBU2	259 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	RAB21	Q9UL25	225 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	SLC12A4	Q9UP95	1085 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	ZFR2	Q9UPR6	939 aa	Known RBP	4.08	□□□□□ -1.76
CHD2-228	ENST00000637613	FPGT-TNNI3K	V9GXZ4	949 aa		4.08	□□□□□ -1.76
CHD2-228	ENST00000637613		A0A087X1B8	175 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613		A1L4Q6	167 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	PATE3	B3GLJ2	98 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613		B4DLN1	442 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	TEX22	C9J3V5	150 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	TSPAN4	O14817	238 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	ANP32C	O43423	234 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	FOXS1	O43638	330 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	DKC1	O60832	514 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	RPS6KA4	O75676	772 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	ALAD	P13716	330 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	GLUL	P15104	373 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	ACSL1	P33121	698 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	BSG	P35613	385 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	ARL1	P40616	181 aa	Predicted RBP	4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	PCP4	P48539	62 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	MTHFS	P49914	203 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	HNRNPM	P52272	730 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	MVD	P53602	400 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	NLRP5	P59047	1200 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	RPS3A	P61247	264 aa	Known RBP	4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	IFI35	P80217	286 aa	Predicted RBP	4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	P3H1	Q32P28	736 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	CFAP58	Q5T655	872 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	ANKRD40	Q6AI12	368 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	MTHFD1L	Q6UB35	978 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	KIAA1324	Q6UXG2	1013 aa	Known RBP	4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	SYNE3	Q6ZMZ3	975 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613		Q6ZRM9	215 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	KRT27	Q7Z3Y8	459 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	GDF7	Q7Z4P5	450 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	CAND1	Q86VP6	1230 aa	Known RBP	4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	GSPT2	Q8IYD1	628 aa	Known RBP	4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	ZNF808	Q8N4W9	903 aa	Predicted RBP	4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	BEND2	Q8NDZ0	799 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	RFWD2	Q8NHY2	731 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	ETNPPL	Q8TBG4	499 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	CLEC4C	Q8WTT0	213 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	GLG1	Q92896	1179 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	TMEM125	Q96AQ2	219 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	ZG16B	Q96DA0	208 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	AP1M1	Q9BXS5	423 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	GPR87	Q9BY21	358 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	SLC25A18	Q9H1K4	315 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	RANBP17	Q9H2T7	1088 aa	Known RBP	4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	SYNC	Q9H7C4	482 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	TLR8	Q9NR97	1041 aa	Known RBP	4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	ADD3	Q9UEY8	706 aa	Known RBP	4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	SARDH	Q9UL12	918 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	CAMK2A	Q9UQM7	478 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	SNX8	Q9Y5X2	465 aa		4.07	□□□□□ -1.76
CHD2-228	ENST00000637613	LYVE1	Q9Y5Y7	322 aa		4.07	□□□□□ -1.76

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