RNA–Protein interactions for RNA: ENST00000303434.8

TRABD-201, Transcript of TraB domain containing, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRABD, Length 2,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-201ENST00000303434 TMEM121Q9BTD3 319 aa19.18■□□□□ 0.66
TRABD-201ENST00000303434 PTPRHQ9HD43 1115 aa19.18■□□□□ 0.66
TRABD-201ENST00000303434 GIN1Q9NXP7 522 aa19.18■□□□□ 0.66
TRABD-201ENST00000303434 NXF1Q9UBU9 619 aaKnown RBP19.18■□□□□ 0.66
TRABD-201ENST00000303434 ANK1P16157 1881 aa19.18■□□□□ 0.66
TRABD-201ENST00000303434 GOLGA8SH3BPF8 625 aa19.18■□□□□ 0.66
TRABD-201ENST00000303434 ACKR2O00590 384 aa19.18■□□□□ 0.66
TRABD-201ENST00000303434 RPS3AP61247 264 aaKnown RBP19.18■□□□□ 0.66
TRABD-201ENST00000303434 CDK18Q07002 472 aa19.18■□□□□ 0.66
TRABD-201ENST00000303434 PDIA2Q13087 525 aaKnown RBP19.18■□□□□ 0.66
TRABD-201ENST00000303434 FASTKD3Q14CZ7 662 aaKnown RBP19.18■□□□□ 0.66
TRABD-201ENST00000303434 PTPN20Q4JDL3 420 aa19.18■□□□□ 0.66
TRABD-201ENST00000303434 HP1BP3Q5SSJ5 553 aaPredicted RBP19.18■□□□□ 0.66
TRABD-201ENST00000303434 GADL1Q6ZQY3 521 aa19.18■□□□□ 0.66
TRABD-201ENST00000303434 EXOC8Q8IYI6 725 aa19.18■□□□□ 0.66
TRABD-201ENST00000303434 CATSPER1Q8NEC5 780 aa19.18■□□□□ 0.66
TRABD-201ENST00000303434 SHKBP1Q8TBC3 707 aa19.18■□□□□ 0.66
TRABD-201ENST00000303434 RAB3IL1Q8TBN0 382 aa19.18■□□□□ 0.66
TRABD-201ENST00000303434 MRRFQ96E11 262 aaKnown RBP19.18■□□□□ 0.66
TRABD-201ENST00000303434 SMYD3Q9H7B4 428 aa19.18■□□□□ 0.66
TRABD-201ENST00000303434 ATAD3AQ9NVI7 634 aa19.18■□□□□ 0.66
TRABD-201ENST00000303434 STRIP2Q9ULQ0 834 aa19.18■□□□□ 0.66
TRABD-201ENST00000303434 A0A0G2JMZ2 1700 aa19.18■□□□□ 0.66
TRABD-201ENST00000303434 C3orf70A6NLC5 250 aaPredicted RBP19.17■□□□□ 0.66
TRABD-201ENST00000303434 NOP56O00567 594 aaKnown RBP19.17■□□□□ 0.66
TRABD-201ENST00000303434 B4GALT4O60513 344 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 KRT3P12035 628 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 CD19P15391 556 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 PSMA2P25787 234 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 POLR2BP30876 1174 aaKnown RBP19.17■□□□□ 0.66
TRABD-201ENST00000303434 HSPA13P48723 471 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 RNASEH2BQ5TBB1 312 aaKnown RBP19.17■□□□□ 0.66
TRABD-201ENST00000303434 ATF7IP2Q5U623 682 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 PLPPR4Q7Z2D5 763 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 POLNQ7Z5Q5 900 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 CDR2LQ86X02 465 aaPredicted RBP19.17■□□□□ 0.66
TRABD-201ENST00000303434 RANBP9Q96S59 729 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 CYTH4Q9UIA0 394 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 SORCS3Q9UPU3 1222 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 K7EPI3 171 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 SGK1O00141 431 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 SOCS7O14512 581 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 GJB1P08034 283 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 BGNP21810 368 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 PRDX6P30041 224 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 YWHAEP62258 255 aaKnown RBP19.17■□□□□ 0.66
TRABD-201ENST00000303434 HSF5Q4G112 596 aaPredicted RBP19.17■□□□□ 0.66
TRABD-201ENST00000303434 CELF3Q5SZQ8 465 aaKnown RBP19.17■□□□□ 0.66
TRABD-201ENST00000303434 AMIGO2Q86SJ2 522 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 KBTBD6Q86V97 674 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 TMEM126BQ8IUX1 230 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 SLC7A5P1Q8MH63 180 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 TRIML2Q8N7C3 387 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 SLC35B2Q8TB61 432 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 TRAPPC12Q8WVT3 735 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 USP6NLQ92738 828 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 PLEKHA8Q96JA3 519 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 OSBPL10Q9BXB5 764 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 ADAM33Q9BZ11 813 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 NUF2Q9BZD4 464 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 PAIP1Q9H074 479 aaKnown RBP19.17■□□□□ 0.66
TRABD-201ENST00000303434 LHX5Q9H2C1 402 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 C12orf65Q9H3J6 166 aaKnown RBP19.17■□□□□ 0.66
TRABD-201ENST00000303434 FZD8Q9H461 694 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 TJP2Q9UDY2 1190 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 TTLL3Q9Y4R7 772 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 TIMM22Q9Y584 194 aa19.17■□□□□ 0.66
TRABD-201ENST00000303434 INO80B-WBP1J3KQ70 363 aa19.16■□□□□ 0.66
TRABD-201ENST00000303434 ALOX15BO15296 676 aa19.16■□□□□ 0.66
TRABD-201ENST00000303434 B4GALT5O43286 388 aa19.16■□□□□ 0.66
TRABD-201ENST00000303434 IFNB1P01574 187 aa19.16■□□□□ 0.66
TRABD-201ENST00000303434 PGK2P07205 417 aa19.16■□□□□ 0.66
TRABD-201ENST00000303434 AOC1P19801 751 aa19.16■□□□□ 0.66
TRABD-201ENST00000303434 C21orf59P57076 290 aa19.16■□□□□ 0.66
TRABD-201ENST00000303434 EFTUD2Q15029 972 aaKnown RBP eCLIP19.16■□□□□ 0.666e-7■■■■□ 22
TRABD-201ENST00000303434 NDUFA5Q16718 116 aa19.16■□□□□ 0.66
TRABD-201ENST00000303434 EEF1DP3Q658K8 133 aa19.16■□□□□ 0.66
TRABD-201ENST00000303434 PQLC1Q8N2U9 271 aa19.16■□□□□ 0.66
TRABD-201ENST00000303434 ARFGAP1Q8N6T3 406 aa19.16■□□□□ 0.66
TRABD-201ENST00000303434 TSPAN14Q8NG11 270 aa19.16■□□□□ 0.66
TRABD-201ENST00000303434 JOSD2Q8TAC2 188 aa19.16■□□□□ 0.66
TRABD-201ENST00000303434 INO80BQ9C086 356 aaPredicted RBP19.16■□□□□ 0.66
TRABD-201ENST00000303434 NDEL1Q9GZM8 345 aa19.16■□□□□ 0.66
TRABD-201ENST00000303434 ARMC7Q9H6L4 198 aa19.16■□□□□ 0.66
TRABD-201ENST00000303434 PARVBQ9HBI1 364 aa19.16■□□□□ 0.66
TRABD-201ENST00000303434 PCDH9Q9HC56 1237 aa19.16■□□□□ 0.66
TRABD-201ENST00000303434 SAE1Q9UBE0 346 aaPredicted RBP19.16■□□□□ 0.66
TRABD-201ENST00000303434 EVPLQ92817 2033 aa19.16■□□□□ 0.66
TRABD-201ENST00000303434 SF3B1O75533 1304 aaKnown RBP eCLIP19.16■□□□□ 0.663e-6■■■■■ 78.2
TRABD-201ENST00000303434 MYOCOSA0A1B0GUC4 107 aa19.16■□□□□ 0.66
TRABD-201ENST00000303434 PRR5-ARHGAP8B1AHC4 643 aa19.16■□□□□ 0.66
TRABD-201ENST00000303434 ESRRBO95718 433 aa19.16■□□□□ 0.66
TRABD-201ENST00000303434 SERPINA6P08185 405 aa19.16■□□□□ 0.66
TRABD-201ENST00000303434 KRT19P08727 400 aa19.16■□□□□ 0.66
TRABD-201ENST00000303434 ETV4P43268 484 aa19.16■□□□□ 0.66
TRABD-201ENST00000303434 RAP1GAPP47736 663 aa19.16■□□□□ 0.66
TRABD-201ENST00000303434 SLC5A3P53794 718 aa19.16■□□□□ 0.66
TRABD-201ENST00000303434 ARHGAP8P85298 464 aa19.16■□□□□ 0.66
TRABD-201ENST00000303434 SLC25A3Q00325 362 aa19.16■□□□□ 0.66
TRABD-201ENST00000303434 SLC25A11Q02978 314 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms