RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 RHOBTB3O94955 611 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 C1RP00736 705 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 TBC1D3HP0C7X1 549 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 ACP5P13686 325 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 CHN1P15882 459 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 ATF7P17544 494 aaPredicted RBP5.8□□□□□ -1.48
SYNE2-210ENST00000553455 IGFBP2P18065 325 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 TNFRSF1AP19438 455 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 MCM7P33993 719 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 COPB1P53618 953 aaKnown RBP5.8□□□□□ -1.48
SYNE2-210ENST00000553455 MPP1Q00013 466 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 G3BP1Q13283 466 aaKnown RBP eCLIP5.8□□□□□ -1.48
SYNE2-210ENST00000553455 ANKRD1Q15327 319 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 TBC1D3GQ6DHY5 549 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 TBC1D3CQ6IPX1 549 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 WDR93Q6P2C0 686 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 ZNF804AQ7Z570 1209 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 RASAL3Q86YV0 1011 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 TBC1D3Q8IZP1 549 aaPredicted RBP5.8□□□□□ -1.48
SYNE2-210ENST00000553455 Q8N1X5 172 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 FSIP1Q8NA03 581 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 TERB1Q8NA31 727 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 USP38Q8NB14 1042 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 PIGSQ96S52 555 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 NPAS1Q99742 590 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 RNF26Q9BY78 433 aaPredicted RBP5.8□□□□□ -1.48
SYNE2-210ENST00000553455 GPR63Q9BZJ6 419 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 TOR3AQ9H497 397 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 PRDM16Q9HAZ2 1276 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 TMEM98Q9Y2Y6 226 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 ENTPD2Q9Y5L3 495 aa5.8□□□□□ -1.48
SYNE2-210ENST00000553455 COPG1Q9Y678 874 aaKnown RBP5.8□□□□□ -1.48
SYNE2-210ENST00000553455 CYP3A7-CYP3A51PA0A087WV96 503 aa5.79□□□□□ -1.48
SYNE2-210ENST00000553455 FYB1O15117 783 aa5.79□□□□□ -1.48
SYNE2-210ENST00000553455 HNRNPRO43390 633 aaKnown RBP5.79□□□□□ -1.48
SYNE2-210ENST00000553455 EPB41L2O43491 1005 aaKnown RBP5.79□□□□□ -1.48
SYNE2-210ENST00000553455 CYP3A7P24462 503 aa5.79□□□□□ -1.48
SYNE2-210ENST00000553455 NDUFS1P28331 727 aa5.79□□□□□ -1.48
SYNE2-210ENST00000553455 DDIT3P35638 169 aa5.79□□□□□ -1.48
SYNE2-210ENST00000553455 RARRES1P49788 294 aa5.79□□□□□ -1.48
SYNE2-210ENST00000553455 WDR5P61964 334 aaKnown RBP5.79□□□□□ -1.48
SYNE2-210ENST00000553455 ATG16L1Q676U5 607 aa5.79□□□□□ -1.48
SYNE2-210ENST00000553455 LAS2Q8IYD9 372 aa5.79□□□□□ -1.48
SYNE2-210ENST00000553455 ARRDC3Q96B67 414 aa5.79□□□□□ -1.48
SYNE2-210ENST00000553455 REPS1Q96D71 796 aa5.79□□□□□ -1.48
SYNE2-210ENST00000553455 ADAM21Q9UKJ8 722 aa5.79□□□□□ -1.48
SYNE2-210ENST00000553455 MYRFQ9Y2G1 1151 aa5.79□□□□□ -1.48
SYNE2-210ENST00000553455 FNDC1Q4ZHG4 1894 aaPredicted RBP5.79□□□□□ -1.48
SYNE2-210ENST00000553455 SAC3D1A6NKF1 404 aa5.78□□□□□ -1.48
SYNE2-210ENST00000553455 C3orf70A6NLC5 250 aaPredicted RBP5.78□□□□□ -1.48
SYNE2-210ENST00000553455 B8ZZF3 427 aa5.78□□□□□ -1.48
SYNE2-210ENST00000553455 H3BNC9 293 aa5.78□□□□□ -1.48
SYNE2-210ENST00000553455 GRM8O00222 908 aa5.78□□□□□ -1.48
SYNE2-210ENST00000553455 PRYO14603 147 aa5.78□□□□□ -1.48
SYNE2-210ENST00000553455 SEPT4O43236 478 aa5.78□□□□□ -1.48
SYNE2-210ENST00000553455 ALDOAP04075 364 aaKnown RBP5.78□□□□□ -1.48
SYNE2-210ENST00000553455 INSRRP14616 1297 aa5.78□□□□□ -1.48
SYNE2-210ENST00000553455 XBP1P17861 261 aa5.78□□□□□ -1.48
SYNE2-210ENST00000553455 TNFAIP3P21580 790 aa5.78□□□□□ -1.48
SYNE2-210ENST00000553455 SFPQP23246 707 aaKnown RBP eCLIP5.78□□□□□ -1.48
SYNE2-210ENST00000553455 PNPLA4P41247 253 aa5.78□□□□□ -1.48
SYNE2-210ENST00000553455 AGTR2P50052 363 aa5.78□□□□□ -1.48
SYNE2-210ENST00000553455 NR1H2P55055 460 aa5.78□□□□□ -1.48
SYNE2-210ENST00000553455 ABHD18Q0P651 414 aa5.78□□□□□ -1.48
SYNE2-210ENST00000553455 MAPK7Q13164 816 aa5.78□□□□□ -1.48
SYNE2-210ENST00000553455 DDX10Q13206 875 aaKnown RBP5.78□□□□□ -1.48
SYNE2-210ENST00000553455 MFSD13AQ14CX5 517 aa5.78□□□□□ -1.48
SYNE2-210ENST00000553455 SLC29A4Q7RTT9 530 aa5.78□□□□□ -1.48
SYNE2-210ENST00000553455 NEU4Q8WWR8 484 aaPredicted RBP5.78□□□□□ -1.48
SYNE2-210ENST00000553455 AKAP1Q92667 903 aaKnown RBP eCLIP5.78□□□□□ -1.48
SYNE2-210ENST00000553455 AGXT2Q9BYV1 514 aa5.78□□□□□ -1.48
SYNE2-210ENST00000553455 PDE11AQ9HCR9 933 aa5.78□□□□□ -1.48
SYNE2-210ENST00000553455 AFG3L2Q9Y4W6 797 aa5.78□□□□□ -1.48
SYNE2-210ENST00000553455 SPATA31A1Q5TZJ5 1347 aa5.77□□□□□ -1.49
SYNE2-210ENST00000553455 TCRBV5S1A1TA0A578 114 aa5.77□□□□□ -1.49
SYNE2-210ENST00000553455 C16orf96A6NNT2 1141 aa5.77□□□□□ -1.49
SYNE2-210ENST00000553455 KLK10O43240 276 aa5.77□□□□□ -1.49
SYNE2-210ENST00000553455 TSPAN3O60637 253 aa5.77□□□□□ -1.49
SYNE2-210ENST00000553455 EXOC3O60645 756 aa5.77□□□□□ -1.49
SYNE2-210ENST00000553455 MT-CO3P00414 261 aa5.77□□□□□ -1.49
SYNE2-210ENST00000553455 CD4P01730 458 aa5.77□□□□□ -1.49
SYNE2-210ENST00000553455 HNRNPA1P09651 372 aaKnown RBP eCLIP5.77□□□□□ -1.49
SYNE2-210ENST00000553455 ATP1A3P13637 1013 aa5.77□□□□□ -1.49
SYNE2-210ENST00000553455 SLC8A1P32418 973 aa5.77□□□□□ -1.49
SYNE2-210ENST00000553455 STAT6P42226 847 aa5.77□□□□□ -1.49
SYNE2-210ENST00000553455 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.77□□□□□ -1.49
SYNE2-210ENST00000553455 MAPRE1Q15691 268 aaKnown RBP5.77□□□□□ -1.49
SYNE2-210ENST00000553455 TSTD2Q5T7W7 516 aa5.77□□□□□ -1.49
SYNE2-210ENST00000553455 ANO7Q6IWH7 933 aa5.77□□□□□ -1.49
SYNE2-210ENST00000553455 GRASPQ7Z6J2 395 aaPredicted RBP5.77□□□□□ -1.49
SYNE2-210ENST00000553455 PPHLN1Q8NEY8 458 aaKnown RBP5.77□□□□□ -1.49
SYNE2-210ENST00000553455 HVCN1Q96D96 273 aa5.77□□□□□ -1.49
SYNE2-210ENST00000553455 RBM17Q96I25 401 aaKnown RBP5.77□□□□□ -1.49
SYNE2-210ENST00000553455 SLC26A6Q9BXS9 759 aa5.77□□□□□ -1.49
SYNE2-210ENST00000553455 ADGRE3Q9BY15 652 aa5.77□□□□□ -1.49
SYNE2-210ENST00000553455 CLPBQ9H078 707 aa5.77□□□□□ -1.49
SYNE2-210ENST00000553455 SLC22A11Q9NSA0 550 aa5.77□□□□□ -1.49
SYNE2-210ENST00000553455 B3GNT3Q9Y2A9 372 aa5.77□□□□□ -1.49
SYNE2-210ENST00000553455 H7C1Q1 480 aa5.76□□□□□ -1.49
SYNE2-210ENST00000553455 CLIC1O00299 241 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms