RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 YTHDC1Q96MU7 727 aaKnown RBP6.03□□□□□ -1.44
HNRNPC-233ENST00000557768 LSG1Q9H089 658 aaKnown RBP6.03□□□□□ -1.44
HNRNPC-233ENST00000557768 TMEM117Q9H0C3 514 aa6.03□□□□□ -1.44
HNRNPC-233ENST00000557768 ELAC1Q9H777 363 aaKnown RBP6.03□□□□□ -1.44
HNRNPC-233ENST00000557768 NLRC4Q9NPP4 1024 aa6.03□□□□□ -1.44
HNRNPC-233ENST00000557768 PLCB1Q9NQ66 1216 aa6.03□□□□□ -1.44
HNRNPC-233ENST00000557768 RIC8BQ9NVN3 520 aa6.03□□□□□ -1.44
HNRNPC-233ENST00000557768 KLHL11Q9NVR0 708 aa6.03□□□□□ -1.44
HNRNPC-233ENST00000557768 SPG21Q9NZD8 308 aa6.03□□□□□ -1.44
HNRNPC-233ENST00000557768 SORCS3Q9UPU3 1222 aa6.03□□□□□ -1.44
HNRNPC-233ENST00000557768 NR2E1Q9Y466 385 aa6.03□□□□□ -1.44
HNRNPC-233ENST00000557768 PRR23AA6NEV1 266 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 IPO5O00410 1097 aaKnown RBP6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 DDX3XO00571 662 aaKnown RBP eCLIP6.02□□□□□ -1.451e-57■■□□□ 12.4
HNRNPC-233ENST00000557768 TCEA3O75764 348 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 CXCL14O95715 111 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 MTHFD2P13995 350 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 EPCAMP16422 314 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 PDCP20941 246 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 FGFR4P22455 802 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 RPL13P26373 211 aaKnown RBP6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 GJA4P35212 333 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 PPM1AP35813 382 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 FNTBP49356 437 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 METAP2P50579 478 aaKnown RBP eCLIP6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 AK2P54819 239 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 BCAR1P56945 870 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 NLRP11P59045 1033 aaKnown RBP6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 INO80DQ53TQ3 878 aaPredicted RBP6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 CATSPEREQ5SY80 951 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 MCTP2Q6DN12 878 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 EFCAB12Q6NXP0 572 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 APOA5Q6Q788 366 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 SYNE3Q6ZMZ3 975 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 NIPA1Q7RTP0 329 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 FRMD5Q7Z6J6 570 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 ZNF761Q86XN6 746 aaPredicted RBP6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 PROSER1Q86XN7 944 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 ECHDC2Q86YB7 292 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 FAM186BQ8IYM0 893 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 UBALD2Q8IYN6 164 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 SLC39A11Q8N1S5 342 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 ACRBPQ8NEB7 543 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 PPP1R35Q8TAP8 253 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 ADAMTS17Q8TE56 1095 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 ERCC4Q92889 916 aaPredicted RBP6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 ZNF577Q9BSK1 485 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 NAA15Q9BXJ9 866 aaKnown RBP6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 SEMA4AQ9H3S1 761 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 MFSD1Q9H3U5 465 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 BARHL2Q9NY43 387 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 CROTQ9UKG9 612 aa6.02□□□□□ -1.45
HNRNPC-233ENST00000557768 WDR87Q6ZQQ6 2873 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 DCHS1Q96JQ0 3298 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 PRAMEF25A6NGN4 478 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 FAM90A27PA6NNH2 459 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 HMGB1P1B2RPK0 211 aaPredicted RBP6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 PROB1E7EW31 1015 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 ZBTB43O43298 467 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 FOXD2O60548 495 aaPredicted RBP6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 CSDE1O75534 798 aaKnown RBP6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 APOL3O95236 402 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 ZBED1O96006 694 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 PTPN1P18031 435 aaKnown RBP6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 MTHFRP42898 656 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 TRAPPC10P48553 1259 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 ALDH7A1P49419 539 aaKnown RBP6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 GPC3P51654 580 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 SLC5A3P53794 718 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 MANFP55145 182 aaKnown RBP6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 ITIH3Q06033 890 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 DRP2Q13474 957 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 RAPGEF1Q13905 1077 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 NECTIN1Q15223 517 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 UGCGQ16739 394 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 LONRF1Q17RB8 773 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 PRR16Q569H4 304 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 ERAP2Q6P179 960 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 FAM43BQ6ZT52 329 aaPredicted RBP6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 KCNK18Q7Z418 384 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 SGMS1Q86VZ5 419 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 SKAP1Q86WV1 359 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 TMEM173Q86WV6 379 aaPredicted RBP6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 PHYKPLQ8IUZ5 450 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 LINC01465Q8N7H1 131 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 TDRD5Q8NAT2 981 aaKnown RBP6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 FAM156AQ8NDB6 213 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 MYRIPQ8NFW9 859 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 SLC22A17Q8WUG5 538 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 CRYGNQ8WXF5 182 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 LPPQ93052 612 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 C1GALT1C1Q96EU7 318 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 MVB12AQ96EY5 273 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 RAX2Q96IS3 184 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 SCLT1Q96NL6 688 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 CLIC6Q96NY7 704 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 NECTIN4Q96NY8 510 aa6.01□□□□□ -1.45
HNRNPC-233ENST00000557768 MAP7D2Q96T17 732 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms