RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 HDAC4P56524 1084 aa20.12■□□□□ 0.81
PCOLCE-208ENST00000487172 CCZ1BP86790 482 aa20.12■□□□□ 0.81
PCOLCE-208ENST00000487172 CCZ1P86791 482 aaPredicted RBP20.12■□□□□ 0.81
PCOLCE-208ENST00000487172 ZNF252P-AS1Q0IIN9 211 aa20.12■□□□□ 0.81
PCOLCE-208ENST00000487172 CDO1Q16878 200 aa20.12■□□□□ 0.81
PCOLCE-208ENST00000487172 SH3PXD2AQ5TCZ1 1133 aa20.12■□□□□ 0.81
PCOLCE-208ENST00000487172 TRIM68Q6AZZ1 485 aa20.12■□□□□ 0.81
PCOLCE-208ENST00000487172 ZNF564Q8TBZ8 553 aaPredicted RBP20.12■□□□□ 0.81
PCOLCE-208ENST00000487172 CSGALNACT1Q8TDX6 532 aa20.12■□□□□ 0.81
PCOLCE-208ENST00000487172 FAM172AQ8WUF8 416 aa20.12■□□□□ 0.81
PCOLCE-208ENST00000487172 ATP2A3Q93084 1043 aa20.12■□□□□ 0.81
PCOLCE-208ENST00000487172 TRIM7Q9C029 511 aa20.12■□□□□ 0.81
PCOLCE-208ENST00000487172 EBF3Q9H4W6 596 aa20.12■□□□□ 0.81
PCOLCE-208ENST00000487172 ECT2Q9H8V3 914 aa20.12■□□□□ 0.81
PCOLCE-208ENST00000487172 COX16Q9P0S2 106 aa20.12■□□□□ 0.81
PCOLCE-208ENST00000487172 CTTNBP2NLQ9P2B4 639 aa20.12■□□□□ 0.81
PCOLCE-208ENST00000487172 WNT16Q9UBV4 365 aa20.12■□□□□ 0.81
PCOLCE-208ENST00000487172 IP6K2Q9UHH9 426 aa20.12■□□□□ 0.81
PCOLCE-208ENST00000487172 REXO2Q9Y3B8 237 aaKnown RBP20.12■□□□□ 0.81
PCOLCE-208ENST00000487172 MYO1FO00160 1098 aa20.11■□□□□ 0.81
PCOLCE-208ENST00000487172 SCAMP3O14828 347 aaKnown RBP20.11■□□□□ 0.81
PCOLCE-208ENST00000487172 PJA2O43164 708 aa20.11■□□□□ 0.81
PCOLCE-208ENST00000487172 ATXN1P54253 815 aaKnown RBP20.11■□□□□ 0.81
PCOLCE-208ENST00000487172 NR1H3Q13133 447 aa20.11■□□□□ 0.81
PCOLCE-208ENST00000487172 PIGHQ14442 188 aaPredicted RBP20.11■□□□□ 0.81
PCOLCE-208ENST00000487172 ADGRF1Q5T601 910 aa20.11■□□□□ 0.81
PCOLCE-208ENST00000487172 ACBD5Q5T8D3 534 aaPredicted RBP20.11■□□□□ 0.81
PCOLCE-208ENST00000487172 CPA6Q8N4T0 437 aa20.11■□□□□ 0.81
PCOLCE-208ENST00000487172 NIPA2Q8N8Q9 360 aa20.11■□□□□ 0.81
PCOLCE-208ENST00000487172 SLC35G2Q8TBE7 412 aa20.11■□□□□ 0.81
PCOLCE-208ENST00000487172 RFFLQ8WZ73 363 aa20.11■□□□□ 0.81
PCOLCE-208ENST00000487172 RNF34Q969K3 372 aa20.11■□□□□ 0.81
PCOLCE-208ENST00000487172 DDX50Q9BQ39 737 aaKnown RBP20.11■□□□□ 0.81
PCOLCE-208ENST00000487172 ANAPC7Q9UJX3 599 aa20.11■□□□□ 0.81
PCOLCE-208ENST00000487172 COL4A2P08572 1712 aa20.1■□□□□ 0.81
PCOLCE-208ENST00000487172 A0A0A6YYK5 440 aaPredicted RBP20.1■□□□□ 0.81
PCOLCE-208ENST00000487172 GFRA2O00451 464 aa20.1■□□□□ 0.81
PCOLCE-208ENST00000487172 GLULP15104 373 aa20.1■□□□□ 0.81
PCOLCE-208ENST00000487172 ARSAP15289 507 aa20.1■□□□□ 0.81
PCOLCE-208ENST00000487172 VAV2P52735 878 aa20.1■□□□□ 0.81
PCOLCE-208ENST00000487172 ZXDAP98168 799 aa20.1■□□□□ 0.81
PCOLCE-208ENST00000487172 TNK2Q07912 1038 aa20.1■□□□□ 0.81
PCOLCE-208ENST00000487172 CCDC173Q0VFZ6 552 aa20.1■□□□□ 0.81
PCOLCE-208ENST00000487172 DHCR24Q15392 516 aa20.1■□□□□ 0.81
PCOLCE-208ENST00000487172 ITPRIPL2Q3MIP1 535 aa20.1■□□□□ 0.81
PCOLCE-208ENST00000487172 RHBDF2Q6PJF5 856 aa20.1■□□□□ 0.81
PCOLCE-208ENST00000487172 TXLNBQ8N3L3 684 aa20.1■□□□□ 0.81
PCOLCE-208ENST00000487172 ACRBPQ8NEB7 543 aa20.1■□□□□ 0.81
PCOLCE-208ENST00000487172 NTAN1Q96AB6 310 aa20.1■□□□□ 0.81
PCOLCE-208ENST00000487172 PPP1R9BQ96SB3 815 aa20.1■□□□□ 0.81
PCOLCE-208ENST00000487172 TKTL2Q9H0I9 626 aa20.1■□□□□ 0.81
PCOLCE-208ENST00000487172 SPHK2Q9NRA0 654 aa20.1■□□□□ 0.81
PCOLCE-208ENST00000487172 GTSE1Q9NYZ3 720 aa20.1■□□□□ 0.81
PCOLCE-208ENST00000487172 MARK1Q9P0L2 795 aa20.1■□□□□ 0.81
PCOLCE-208ENST00000487172 DCXO43602 365 aa20.09■□□□□ 0.81
PCOLCE-208ENST00000487172 RNF8O76064 485 aa20.09■□□□□ 0.81
PCOLCE-208ENST00000487172 CYP17A1P05093 508 aa20.09■□□□□ 0.81
PCOLCE-208ENST00000487172 ARHGAP25P42331 645 aa20.09■□□□□ 0.81
PCOLCE-208ENST00000487172 AIF1P55008 147 aa20.09■□□□□ 0.81
PCOLCE-208ENST00000487172 HADHBP55084 474 aaKnown RBP20.09■□□□□ 0.81
PCOLCE-208ENST00000487172 ARL13BQ3SXY8 428 aa20.09■□□□□ 0.81
PCOLCE-208ENST00000487172 RAB6CQ53S08 254 aa20.09■□□□□ 0.81
PCOLCE-208ENST00000487172 FAM133BQ5BKY9 247 aaKnown RBP20.09■□□□□ 0.81
PCOLCE-208ENST00000487172 FAM131BQ86XD5 332 aa20.09■□□□□ 0.81
PCOLCE-208ENST00000487172 C1orf74Q96LT6 269 aa20.09■□□□□ 0.81
PCOLCE-208ENST00000487172 HAPLN3Q96S86 360 aa20.09■□□□□ 0.81
PCOLCE-208ENST00000487172 RAB6CQ9H0N0 254 aa20.09■□□□□ 0.81
PCOLCE-208ENST00000487172 C8orf33Q9H7E9 229 aaPredicted RBP20.09■□□□□ 0.81
PCOLCE-208ENST00000487172 OSGEPQ9NPF4 335 aa20.09■□□□□ 0.81
PCOLCE-208ENST00000487172 TICRRQ7Z2Z1 1910 aa20.09■□□□□ 0.81
PCOLCE-208ENST00000487172 OTOL1A6NHN0 477 aaPredicted RBP20.08■□□□□ 0.81
PCOLCE-208ENST00000487172 BTNL10A8MVZ5 291 aa20.08■□□□□ 0.81
PCOLCE-208ENST00000487172 PAGE1O75459 146 aa20.08■□□□□ 0.81
PCOLCE-208ENST00000487172 MOCS2O96007 188 aaPredicted RBP20.08■□□□□ 0.81
PCOLCE-208ENST00000487172 ADH1CP00326 375 aa20.08■□□□□ 0.81
PCOLCE-208ENST00000487172 ALADP13716 330 aa20.08■□□□□ 0.81
PCOLCE-208ENST00000487172 ADRA1BP35368 520 aa20.08■□□□□ 0.81
PCOLCE-208ENST00000487172 PCK1P35558 622 aa20.08■□□□□ 0.81
PCOLCE-208ENST00000487172 AMPD2Q01433 879 aa20.08■□□□□ 0.81
PCOLCE-208ENST00000487172 GAD2Q05329 585 aa20.08■□□□□ 0.81
PCOLCE-208ENST00000487172 SLC44A4Q53GD3 710 aa20.08■□□□□ 0.81
PCOLCE-208ENST00000487172 LY6G5CQ5SRR4 150 aa20.08■□□□□ 0.81
PCOLCE-208ENST00000487172 NADSYN1Q6IA69 706 aa20.08■□□□□ 0.81
PCOLCE-208ENST00000487172 TMEM25Q86YD3 366 aa20.08■□□□□ 0.81
PCOLCE-208ENST00000487172 ARFGAP1Q8N6T3 406 aa20.08■□□□□ 0.81
PCOLCE-208ENST00000487172 EDAQ92838 391 aa20.08■□□□□ 0.81
PCOLCE-208ENST00000487172 MSANTD3Q96H12 275 aa20.08■□□□□ 0.81
PCOLCE-208ENST00000487172 CALR3Q96L12 384 aaKnown RBP20.08■□□□□ 0.81
PCOLCE-208ENST00000487172 PRMT1Q99873 361 aaKnown RBP20.08■□□□□ 0.81
PCOLCE-208ENST00000487172 ANLNQ9NQW6 1124 aa20.08■□□□□ 0.81
PCOLCE-208ENST00000487172 XPO7Q9UIA9 1087 aaKnown RBP20.08■□□□□ 0.81
PCOLCE-208ENST00000487172 ADGRG1Q9Y653 693 aa20.08■□□□□ 0.81
PCOLCE-208ENST00000487172 RCCD1A6NED2 376 aa20.07■□□□□ 0.8
PCOLCE-208ENST00000487172 I6L893 689 aaPredicted RBP20.07■□□□□ 0.8
PCOLCE-208ENST00000487172 HOXC11O43248 304 aaPredicted RBP20.07■□□□□ 0.8
PCOLCE-208ENST00000487172 LRCH4O75427 683 aa20.07■□□□□ 0.8
PCOLCE-208ENST00000487172 PROSCO94903 275 aa20.07■□□□□ 0.8
PCOLCE-208ENST00000487172 PTMAP06454 111 aaKnown RBP20.07■□□□□ 0.8
PCOLCE-208ENST00000487172 GJA4P35212 333 aa20.07■□□□□ 0.8
PCOLCE-208ENST00000487172 PRKCQQ04759 706 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms