RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 SWSAP1Q6NVH7 229 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 PGM2L1Q6PCE3 622 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 C11orf88Q6PI97 169 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 APOA5Q6Q788 366 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 CRTC1Q6UUV9 634 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 UNC5DQ6UXZ4 953 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 KSR2Q6VAB6 950 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 RFPL4BQ6ZWI9 263 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 ATG9AQ7Z3C6 839 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 LUZP2Q86TE4 346 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 FAM83AQ86UY5 434 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 TXNDC2Q86VQ3 553 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 HORMAD1Q86X24 394 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 VSIG1Q86XK7 387 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 PALB2Q86YC2 1186 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 RCOR2Q8IZ40 523 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 RTKN2Q8IZC4 609 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 FAM9CQ8IZT9 166 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 TTC29Q8NA56 475 aaPredicted RBP3.72□□□□□ -1.81
XRCC4-203ENST00000396027 SPATA4Q8NEY3 305 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 ENGASEQ8NFI3 743 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 OR8H1Q8NGG4 311 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 OR52K1Q8NGK4 314 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 FBXO30Q8TB52 745 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 TBC1D16Q8TBP0 767 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 GANCQ8TET4 914 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 GRK7Q8WTQ7 553 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 TGFBRAP1Q8WUH2 860 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 DEPDC1BQ8WUY9 529 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 ZNF606Q8WXB4 792 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 VPS33AQ96AX1 596 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 TBC1D20Q96BZ9 403 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 ARMC5Q96C12 935 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 PDXPQ96GD0 296 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 APOPT1Q96IL0 206 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 FAM167AQ96KS9 214 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 C7orf34Q96L11 122 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 PRICKLE1Q96MT3 831 aaPredicted RBP3.72□□□□□ -1.81
XRCC4-203ENST00000396027 ALPK1Q96QP1 1244 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 NUP88Q99567 741 aaPredicted RBP3.72□□□□□ -1.81
XRCC4-203ENST00000396027 TM9SF2Q99805 663 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 BCL7BQ9BQE9 202 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 DDX23Q9BUQ8 820 aaKnown RBP3.72□□□□□ -1.81
XRCC4-203ENST00000396027 C9orf16Q9BUW7 83 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 MRIQ9BWK5 157 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 EDEM3Q9BZQ6 932 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 WDR12Q9GZL7 423 aaKnown RBP3.72□□□□□ -1.81
XRCC4-203ENST00000396027 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.72□□□□□ -1.81
XRCC4-203ENST00000396027 CLPBQ9H078 707 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 ZNF696Q9H7X3 374 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 ZFYVE28Q9HCC9 887 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 TUFT1Q9NNX1 390 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 HMG20AQ9NP66 347 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 KLHL1Q9NR64 748 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 ETNK2Q9NVF9 386 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 PAQR5Q9NXK6 330 aaPredicted RBP3.72□□□□□ -1.81
XRCC4-203ENST00000396027 STK32BQ9NY57 414 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 ANKMY1Q9P2S6 941 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 IPO11Q9UI26 975 aaKnown RBP3.72□□□□□ -1.81
XRCC4-203ENST00000396027 FOXD3Q9UJU5 478 aaPredicted RBP3.72□□□□□ -1.81
XRCC4-203ENST00000396027 CDH7Q9ULB5 785 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 RAB26Q9ULW5 256 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 SLC8A2Q9UPR5 921 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 SORCS3Q9UPU3 1222 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 PCDHB5Q9Y5E4 795 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 EPN1Q9Y6I3 576 aaPredicted RBP3.72□□□□□ -1.81
XRCC4-203ENST00000396027 CAPN6Q9Y6Q1 641 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 ZFYVE9O95405 1425 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 PTCH1Q13635 1447 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 MN1Q10571 1320 aaPredicted RBP3.72□□□□□ -1.81
XRCC4-203ENST00000396027 SYNGAP1Q96PV0 1343 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 KDM3AQ9Y4C1 1321 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 CROCC2H7BZ55 1655 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 MRC2Q9UBG0 1479 aa3.71□□□□□ -1.81
XRCC4-203ENST00000396027 FAM237AA0A1B0GTK4 181 aa3.71□□□□□ -1.82
XRCC4-203ENST00000396027 A0A1W2PQC6 194 aa3.71□□□□□ -1.82
XRCC4-203ENST00000396027 LRRIQ4A6NIV6 560 aa3.71□□□□□ -1.82
XRCC4-203ENST00000396027 ZSCAN5BA6NJL1 495 aa3.71□□□□□ -1.82
XRCC4-203ENST00000396027 ZNF233A6NK53 670 aa3.71□□□□□ -1.82
XRCC4-203ENST00000396027 WRBO00258 174 aa3.71□□□□□ -1.82
XRCC4-203ENST00000396027 ENPP3O14638 875 aa3.71□□□□□ -1.82
XRCC4-203ENST00000396027 SLC9A3R1O14745 358 aaPredicted RBP3.71□□□□□ -1.82
XRCC4-203ENST00000396027 KIAA0355O15063 1070 aa3.71□□□□□ -1.82
XRCC4-203ENST00000396027 RAD51BO15315 384 aa3.71□□□□□ -1.82
XRCC4-203ENST00000396027 ZW10O43264 779 aa3.71□□□□□ -1.82
XRCC4-203ENST00000396027 NOS1APO75052 506 aaPredicted RBP3.71□□□□□ -1.82
XRCC4-203ENST00000396027 MFAP3LO75121 409 aa3.71□□□□□ -1.82
XRCC4-203ENST00000396027 NIPSNAP2O75323 286 aa3.71□□□□□ -1.82
XRCC4-203ENST00000396027 CIB2O75838 187 aa3.71□□□□□ -1.82
XRCC4-203ENST00000396027 CCNDBP1O95273 360 aa3.71□□□□□ -1.82
XRCC4-203ENST00000396027 APBB3O95704 486 aa3.71□□□□□ -1.82
XRCC4-203ENST00000396027 OAS1P00973 400 aaKnown RBP3.71□□□□□ -1.82
XRCC4-203ENST00000396027 KRT16P08779 473 aa3.71□□□□□ -1.82
XRCC4-203ENST00000396027 SNRPAP09012 282 aaKnown RBP3.71□□□□□ -1.82
XRCC4-203ENST00000396027 SCG2P13521 617 aa3.71□□□□□ -1.82
XRCC4-203ENST00000396027 UQCRBP14927 111 aa3.71□□□□□ -1.82
XRCC4-203ENST00000396027 GSPT1P15170 499 aaKnown RBP3.71□□□□□ -1.82
XRCC4-203ENST00000396027 NPR1P16066 1061 aa3.71□□□□□ -1.82
XRCC4-203ENST00000396027 PDGFRAP16234 1089 aa3.71□□□□□ -1.82
XRCC4-203ENST00000396027 RAB4AP20338 218 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms