RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 NTSR1P30989 418 aa13.72□□□□□ -0.21
HNRNPC-205ENST00000553300 HOXC13P31276 330 aa13.72□□□□□ -0.21
HNRNPC-205ENST00000553300 USP8P40818 1118 aa13.72□□□□□ -0.21
HNRNPC-205ENST00000553300 ID4P47928 161 aa13.72□□□□□ -0.21
HNRNPC-205ENST00000553300 SNX16P57768 344 aa13.72□□□□□ -0.21
HNRNPC-205ENST00000553300 LMNB2Q03252 620 aa13.72□□□□□ -0.21
HNRNPC-205ENST00000553300 RING1Q06587 406 aa13.72□□□□□ -0.21
HNRNPC-205ENST00000553300 NNTQ13423 1086 aa13.72□□□□□ -0.21
HNRNPC-205ENST00000553300 ELF2Q15723 593 aa13.72□□□□□ -0.21
HNRNPC-205ENST00000553300 MPPE1Q53F39 396 aa13.72□□□□□ -0.21
HNRNPC-205ENST00000553300 TCP11X2Q5H9J9 407 aa13.72□□□□□ -0.21
HNRNPC-205ENST00000553300 ADGRF1Q5T601 910 aa13.72□□□□□ -0.21
HNRNPC-205ENST00000553300 GJB7Q6PEY0 223 aa13.72□□□□□ -0.21
HNRNPC-205ENST00000553300 TMEM110Q86TL2 294 aa13.72□□□□□ -0.21
HNRNPC-205ENST00000553300 SFTPA1Q8IWL2 248 aa13.72□□□□□ -0.21
HNRNPC-205ENST00000553300 GPT2Q8TD30 523 aa13.72□□□□□ -0.21
HNRNPC-205ENST00000553300 DDI1Q8WTU0 396 aa13.72□□□□□ -0.21
HNRNPC-205ENST00000553300 NOX5Q96PH1 765 aa13.72□□□□□ -0.21
HNRNPC-205ENST00000553300 MIS12Q9H081 205 aa13.72□□□□□ -0.21
HNRNPC-205ENST00000553300 SFMBT1Q9UHJ3 866 aa13.72□□□□□ -0.21
HNRNPC-205ENST00000553300 DNAJC12Q9UKB3 198 aa13.72□□□□□ -0.21
HNRNPC-205ENST00000553300 PCDHGC3Q9UN70 934 aa13.72□□□□□ -0.21
HNRNPC-205ENST00000553300 PCDHGA5Q9Y5G8 931 aa13.72□□□□□ -0.21
HNRNPC-205ENST00000553300 DCHS1Q96JQ0 3298 aa13.72□□□□□ -0.21
HNRNPC-205ENST00000553300 BECN2A8MW95 431 aa13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 PIK3R2O00459 728 aa13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 TRIM24O15164 1050 aa13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 TIMM44O43615 452 aa13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 ADAM23O75077 832 aa13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 CALCAP01258 141 aa13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 TPM2P07951 284 aa13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 NCAM1P13591 858 aa13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 HNRNPLP14866 589 aaKnown RBP eCLIP13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 TGM1P22735 817 aa13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 SLC11A2P49281 568 aa13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 EML5Q05BV3 1969 aa13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 CSRP2Q16527 193 aa13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 MIIPQ5JXC2 388 aa13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 ANO7Q6IWH7 933 aa13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 DENND1BQ6P3S1 775 aa13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 SASS6Q6UVJ0 657 aa13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 TMEM92Q6UXU6 159 aa13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 KBTBD6Q86V97 674 aa13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 CHPFQ8IZ52 775 aa13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 ZNF557Q8N988 423 aaPredicted RBP13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 UCMAQ8WVF2 138 aa13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 BHMTQ93088 406 aa13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 TMA16Q96EY4 203 aaKnown RBP13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 SERPINB11Q96P15 392 aa13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 LHX5Q9H2C1 402 aa13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 SIX2Q9NPC8 291 aa13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 SAMSN1Q9NSI8 373 aaKnown RBP13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 ANO10Q9NW15 660 aa13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 PLK2Q9NYY3 685 aa13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 USP18Q9UMW8 372 aa13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 NFE2L3Q9Y4A8 694 aa13.71□□□□□ -0.21
HNRNPC-205ENST00000553300 PES1O00541 588 aaKnown RBP13.71□□□□□ -0.22
HNRNPC-205ENST00000553300 CAPN9O14815 690 aa13.71□□□□□ -0.22
HNRNPC-205ENST00000553300 IRAK2O43187 625 aa13.71□□□□□ -0.22
HNRNPC-205ENST00000553300 IGLV3-27P01718 113 aa13.71□□□□□ -0.22
HNRNPC-205ENST00000553300 GLI1P08151 1106 aa13.71□□□□□ -0.22
HNRNPC-205ENST00000553300 KRT9P35527 623 aa13.71□□□□□ -0.22
HNRNPC-205ENST00000553300 TBX4P57082 545 aa13.71□□□□□ -0.22
HNRNPC-205ENST00000553300 YWHAZP63104 245 aaKnown RBP13.71□□□□□ -0.22
HNRNPC-205ENST00000553300 SPEM2Q0P670 501 aa13.71□□□□□ -0.22
HNRNPC-205ENST00000553300 PUM1Q14671 1186 aaKnown RBP eCLIP13.71□□□□□ -0.226e-12■□□□□ 10.8
HNRNPC-205ENST00000553300 EIF4HQ15056 248 aaKnown RBP13.71□□□□□ -0.22
HNRNPC-205ENST00000553300 PLK5Q496M5 336 aa13.71□□□□□ -0.22
HNRNPC-205ENST00000553300 MPP7Q5T2T1 576 aa13.71□□□□□ -0.22
HNRNPC-205ENST00000553300 ANKS1BQ7Z6G8 1248 aa13.71□□□□□ -0.22
HNRNPC-205ENST00000553300 MDGA1Q8NFP4 955 aa13.71□□□□□ -0.22
HNRNPC-205ENST00000553300 OLIG1Q8TAK6 271 aa13.71□□□□□ -0.22
HNRNPC-205ENST00000553300 CLEC4CQ8WTT0 213 aa13.71□□□□□ -0.22
HNRNPC-205ENST00000553300 FAM149B1Q96BN6 582 aa13.71□□□□□ -0.22
HNRNPC-205ENST00000553300 GABRG3Q99928 467 aa13.71□□□□□ -0.22
HNRNPC-205ENST00000553300 DDX50Q9BQ39 737 aaKnown RBP13.71□□□□□ -0.22
HNRNPC-205ENST00000553300 POPDC2Q9HBU9 364 aa13.71□□□□□ -0.22
HNRNPC-205ENST00000553300 SEMA4GQ9NTN9 838 aa13.71□□□□□ -0.22
HNRNPC-205ENST00000553300 BCCIPQ9P287 314 aaKnown RBP eCLIP13.71□□□□□ -0.22
HNRNPC-205ENST00000553300 TLR6Q9Y2C9 796 aa13.71□□□□□ -0.22
HNRNPC-205ENST00000553300 CEP83Q9Y592 693 aa13.71□□□□□ -0.22
HNRNPC-205ENST00000553300 ANTXRLA6NF34 631 aa13.7□□□□□ -0.22
HNRNPC-205ENST00000553300 PRRT4C9JH25 899 aa13.7□□□□□ -0.22
HNRNPC-205ENST00000553300 FOXN3O00409 490 aaPredicted RBP13.7□□□□□ -0.22
HNRNPC-205ENST00000553300 PAPSS1O43252 624 aaPredicted RBP13.7□□□□□ -0.22
HNRNPC-205ENST00000553300 EPN2O95208 641 aa13.7□□□□□ -0.22
HNRNPC-205ENST00000553300 FYNP06241 537 aa13.7□□□□□ -0.22
HNRNPC-205ENST00000553300 HOXB2P14652 356 aa13.7□□□□□ -0.22
HNRNPC-205ENST00000553300 CLCN1P35523 988 aa13.7□□□□□ -0.22
HNRNPC-205ENST00000553300 FOXK2Q01167 660 aa13.7□□□□□ -0.22
HNRNPC-205ENST00000553300 APBA1Q02410 837 aa13.7□□□□□ -0.22
HNRNPC-205ENST00000553300 PDCLQ13371 301 aa13.7□□□□□ -0.22
HNRNPC-205ENST00000553300 HSP90AA4PQ58FG1 418 aa13.7□□□□□ -0.22
HNRNPC-205ENST00000553300 SPDYCQ5MJ68 293 aa13.7□□□□□ -0.22
HNRNPC-205ENST00000553300 TOGARAM2Q6ZUX3 1019 aa13.7□□□□□ -0.22
HNRNPC-205ENST00000553300 ERMP1Q7Z2K6 904 aa13.7□□□□□ -0.22
HNRNPC-205ENST00000553300 FAM71AQ8IYT1 594 aa13.7□□□□□ -0.22
HNRNPC-205ENST00000553300 PPP1R13BQ96KQ4 1090 aa13.7□□□□□ -0.22
HNRNPC-205ENST00000553300 SPACA7Q96KW9 195 aa13.7□□□□□ -0.22
HNRNPC-205ENST00000553300 DUSP15Q9H1R2 295 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms