RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 AFF3P51826 1226 aaKnown RBP14.96□□□□□ -0.01
VARS-228ENST00000495010 DLG4P78352 724 aa14.96□□□□□ -0.01
VARS-228ENST00000495010 EFEMP1Q12805 493 aa14.96□□□□□ -0.01
VARS-228ENST00000495010 ZNF234Q14588 700 aa14.96□□□□□ -0.01
VARS-228ENST00000495010 EIF4HQ15056 248 aaKnown RBP14.96□□□□□ -0.01
VARS-228ENST00000495010 ZACNQ401N2 412 aa14.96□□□□□ -0.01
VARS-228ENST00000495010 FYB2Q5VWT5 728 aa14.96□□□□□ -0.01
VARS-228ENST00000495010 SPOPLQ6IQ16 392 aa14.96□□□□□ -0.01
VARS-228ENST00000495010 SHC4Q6S5L8 630 aa14.96□□□□□ -0.01
VARS-228ENST00000495010 SERPINA13PQ6UXR4 307 aa14.96□□□□□ -0.01
VARS-228ENST00000495010 CCDC186Q7Z3E2 898 aa14.96□□□□□ -0.01
VARS-228ENST00000495010 DDI1Q8WTU0 396 aa14.96□□□□□ -0.01
VARS-228ENST00000495010 PCED1AQ9H1Q7 454 aa14.96□□□□□ -0.01
VARS-228ENST00000495010 FAM13BQ9NYF5 915 aa14.96□□□□□ -0.01
VARS-228ENST00000495010 STRIP2Q9ULQ0 834 aa14.96□□□□□ -0.01
VARS-228ENST00000495010 FRMD4BQ9Y2L6 1034 aa14.96□□□□□ -0.01
VARS-228ENST00000495010 FASNP49327 2511 aaKnown RBP14.95□□□□□ -0.02
VARS-228ENST00000495010 TIMM44O43615 452 aa14.95□□□□□ -0.02
VARS-228ENST00000495010 ASS1P00966 412 aaKnown RBP14.95□□□□□ -0.02
VARS-228ENST00000495010 HLA-DRAP01903 254 aa14.95□□□□□ -0.02
VARS-228ENST00000495010 KLKB1P03952 638 aa14.95□□□□□ -0.02
VARS-228ENST00000495010 ATXN1LP0C7T5 689 aaKnown RBP14.95□□□□□ -0.02
VARS-228ENST00000495010 CSNK1EP49674 416 aaKnown RBP14.95□□□□□ -0.02
VARS-228ENST00000495010 KIF11P52732 1056 aa14.95□□□□□ -0.02
VARS-228ENST00000495010 CUL4BQ13620 913 aa14.95□□□□□ -0.02
VARS-228ENST00000495010 ENPP2Q13822 863 aa14.95□□□□□ -0.02
VARS-228ENST00000495010 CCDC157Q569K6 752 aa14.95□□□□□ -0.02
VARS-228ENST00000495010 CEP135Q66GS9 1140 aa14.95□□□□□ -0.02
VARS-228ENST00000495010 SV2AQ7L0J3 742 aa14.95□□□□□ -0.02
VARS-228ENST00000495010 RSRC2Q7L4I2 434 aaKnown RBP14.95□□□□□ -0.02
VARS-228ENST00000495010 SCD5Q86SK9 330 aa14.95□□□□□ -0.02
VARS-228ENST00000495010 DENND1CQ8IV53 801 aa14.95□□□□□ -0.02
VARS-228ENST00000495010 SLC9A9Q8IVB4 645 aa14.95□□□□□ -0.02
VARS-228ENST00000495010 CEP57L1Q8IYX8 460 aa14.95□□□□□ -0.02
VARS-228ENST00000495010 ARHGAP18Q8N392 663 aa14.95□□□□□ -0.02
VARS-228ENST00000495010 ZNF276Q8N554 614 aa14.95□□□□□ -0.02
VARS-228ENST00000495010 CCDC150Q8NCX0 1101 aa14.95□□□□□ -0.02
VARS-228ENST00000495010 TMC2Q8TDI7 906 aa14.95□□□□□ -0.02
VARS-228ENST00000495010 INTS4Q96HW7 963 aaKnown RBP14.95□□□□□ -0.02
VARS-228ENST00000495010 PIWIL1Q96J94 861 aaKnown RBP14.95□□□□□ -0.02
VARS-228ENST00000495010 SLC2A11Q9BYW1 496 aa14.95□□□□□ -0.02
VARS-228ENST00000495010 CYP3A43Q9HB55 503 aa14.95□□□□□ -0.02
VARS-228ENST00000495010 SCUBE2Q9NQ36 999 aa14.95□□□□□ -0.02
VARS-228ENST00000495010 EXOC1Q9NV70 894 aa14.95□□□□□ -0.02
VARS-228ENST00000495010 CLIC5Q9NZA1 410 aa14.95□□□□□ -0.02
VARS-228ENST00000495010 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.95□□□□□ -0.02
VARS-228ENST00000495010 PLXNB3Q9ULL4 1909 aa14.94□□□□□ -0.02
VARS-228ENST00000495010 IKBKBO14920 756 aa14.94□□□□□ -0.02
VARS-228ENST00000495010 YEATS4O95619 227 aa14.94□□□□□ -0.02
VARS-228ENST00000495010 IGLV3-19P01714 112 aa14.94□□□□□ -0.02
VARS-228ENST00000495010 CD58P19256 250 aa14.94□□□□□ -0.02
VARS-228ENST00000495010 PRKCHP24723 683 aa14.94□□□□□ -0.02
VARS-228ENST00000495010 COPAP53621 1224 aa14.94□□□□□ -0.02
VARS-228ENST00000495010 BNC1Q01954 994 aa14.94□□□□□ -0.02
VARS-228ENST00000495010 CYP4F3Q08477 520 aa14.94□□□□□ -0.02
VARS-228ENST00000495010 INCA1Q0VD86 236 aa14.94□□□□□ -0.02
VARS-228ENST00000495010 OR2T3Q8NH03 318 aa14.94□□□□□ -0.02
VARS-228ENST00000495010 BAHD1Q8TBE0 780 aaPredicted RBP14.94□□□□□ -0.02
VARS-228ENST00000495010 TWNKQ96RR1 684 aa14.94□□□□□ -0.02
VARS-228ENST00000495010 DUSP16Q9BY84 665 aa14.94□□□□□ -0.02
VARS-228ENST00000495010 LHX5Q9H2C1 402 aa14.94□□□□□ -0.02
VARS-228ENST00000495010 DMAC2Q9NW81 257 aa14.94□□□□□ -0.02
VARS-228ENST00000495010 DKK4Q9UBT3 224 aa14.94□□□□□ -0.02
VARS-228ENST00000495010 AGO1Q9UL18 857 aaKnown RBP14.94□□□□□ -0.02
VARS-228ENST00000495010 PLA2G4CQ9UP65 541 aa14.94□□□□□ -0.02
VARS-228ENST00000495010 ANKRD11Q6UB99 2663 aaPredicted RBP14.94□□□□□ -0.02
VARS-228ENST00000495010 SLC12A8A0AV02 714 aa14.93□□□□□ -0.02
VARS-228ENST00000495010 TRABD2BA6NFA1 517 aa14.93□□□□□ -0.02
VARS-228ENST00000495010 TNFSF14O43557 240 aa14.93□□□□□ -0.02
VARS-228ENST00000495010 CALUO43852 315 aaPredicted RBP14.93□□□□□ -0.02
VARS-228ENST00000495010 NR3C1P04150 777 aa14.93□□□□□ -0.02
VARS-228ENST00000495010 SLC8A3P57103 927 aa14.93□□□□□ -0.02
VARS-228ENST00000495010 KIF19Q2TAC6 998 aa14.93□□□□□ -0.02
VARS-228ENST00000495010 FNDC3BQ53EP0 1204 aaKnown RBP14.93□□□□□ -0.02
VARS-228ENST00000495010 DBX2Q6ZNG2 339 aa14.93□□□□□ -0.02
VARS-228ENST00000495010 ADAT2Q7Z6V5 191 aaKnown RBP14.93□□□□□ -0.02
VARS-228ENST00000495010 CPXM2Q8N436 756 aa14.93□□□□□ -0.02
VARS-228ENST00000495010 SORCS1Q8WY21 1168 aa14.93□□□□□ -0.02
VARS-228ENST00000495010 HEXIM2Q96MH2 286 aaKnown RBP14.93□□□□□ -0.02
VARS-228ENST00000495010 BACH2Q9BYV9 841 aa14.93□□□□□ -0.02
VARS-228ENST00000495010 TOR4AQ9NXH8 423 aa14.93□□□□□ -0.02
VARS-228ENST00000495010 MARCH2Q9P0N8 246 aa14.93□□□□□ -0.02
VARS-228ENST00000495010 SNX11Q9Y5W9 270 aa14.93□□□□□ -0.02
VARS-228ENST00000495010 DSPP15924 2871 aaKnown RBP14.93□□□□□ -0.02
VARS-228ENST00000495010 WDFY3Q8IZQ1 3526 aa14.93□□□□□ -0.02
VARS-228ENST00000495010 DMXL2Q8TDJ6 3036 aa14.92□□□□□ -0.02
VARS-228ENST00000495010 PDXKO00764 312 aa14.92□□□□□ -0.02
VARS-228ENST00000495010 HLA-EP13747 358 aa14.92□□□□□ -0.02
VARS-228ENST00000495010 GRK6P43250 576 aa14.92□□□□□ -0.02
VARS-228ENST00000495010 ME1P48163 572 aa14.92□□□□□ -0.02
VARS-228ENST00000495010 CCT8P50990 548 aa14.92□□□□□ -0.02
VARS-228ENST00000495010 VAMP7P51809 220 aa14.92□□□□□ -0.02
VARS-228ENST00000495010 STK4Q13043 487 aa14.92□□□□□ -0.02
VARS-228ENST00000495010 INAVAQ3KP66 663 aa14.92□□□□□ -0.02
VARS-228ENST00000495010 MPPE1Q53F39 396 aa14.92□□□□□ -0.02
VARS-228ENST00000495010 PPP1R26Q5T8A7 1209 aaPredicted RBP14.92□□□□□ -0.02
VARS-228ENST00000495010 PDCD7Q8N8D1 485 aaKnown RBP14.92□□□□□ -0.02
VARS-228ENST00000495010 C1orf216Q8TAB5 229 aa14.92□□□□□ -0.02
VARS-228ENST00000495010 PLD4Q96BZ4 506 aa14.92□□□□□ -0.02
VARS-228ENST00000495010 P2RY11Q96G91 374 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms