RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 MMRN1Q13201 1228 aa11.86□□□□□ -0.51
SMAD4-205ENST00000588745 CUL1Q13616 776 aa11.86□□□□□ -0.51
SMAD4-205ENST00000588745 PPP6R3Q5H9R7 873 aaPredicted RBP11.86□□□□□ -0.51
SMAD4-205ENST00000588745 EFHC2Q5JST6 749 aa11.86□□□□□ -0.51
SMAD4-205ENST00000588745 BEND6Q5SZJ8 279 aaPredicted RBP11.86□□□□□ -0.51
SMAD4-205ENST00000588745 TPGS2Q68CL5 300 aa11.86□□□□□ -0.51
SMAD4-205ENST00000588745 SYDE1Q6ZW31 735 aaPredicted RBP11.86□□□□□ -0.51
SMAD4-205ENST00000588745 SND1Q7KZF4 910 aaKnown RBP eCLIP11.86□□□□□ -0.51
SMAD4-205ENST00000588745 MON1AQ86VX9 555 aa11.86□□□□□ -0.51
SMAD4-205ENST00000588745 VPS52Q8N1B4 723 aa11.86□□□□□ -0.51
SMAD4-205ENST00000588745 EIF1ADQ8N9N8 165 aaKnown RBP11.86□□□□□ -0.51
SMAD4-205ENST00000588745 PHOSPHO2Q8TCD6 241 aa11.86□□□□□ -0.51
SMAD4-205ENST00000588745 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.86□□□□□ -0.51
SMAD4-205ENST00000588745 AENQ8WTP8 325 aaKnown RBP11.86□□□□□ -0.51
SMAD4-205ENST00000588745 CLP1Q92989 425 aaKnown RBP11.86□□□□□ -0.51
SMAD4-205ENST00000588745 HAUS1Q96CS2 278 aa11.86□□□□□ -0.51
SMAD4-205ENST00000588745 CCDC114Q96M63 670 aa11.86□□□□□ -0.51
SMAD4-205ENST00000588745 RNF157Q96PX1 679 aa11.86□□□□□ -0.51
SMAD4-205ENST00000588745 RAD9AQ99638 391 aa11.86□□□□□ -0.51
SMAD4-205ENST00000588745 FAM118BQ9BPY3 351 aa11.86□□□□□ -0.51
SMAD4-205ENST00000588745 ERP44Q9BS26 406 aa11.86□□□□□ -0.51
SMAD4-205ENST00000588745 MAK16Q9BXY0 300 aaKnown RBP11.86□□□□□ -0.51
SMAD4-205ENST00000588745 ZBP1Q9H171 429 aa11.86□□□□□ -0.51
SMAD4-205ENST00000588745 MTIF3Q9H2K0 278 aaKnown RBP11.86□□□□□ -0.51
SMAD4-205ENST00000588745 SMOC2Q9H3U7 446 aa11.86□□□□□ -0.51
SMAD4-205ENST00000588745 NMUR1Q9HB89 426 aa11.86□□□□□ -0.51
SMAD4-205ENST00000588745 FAM114A2Q9NRY5 505 aa11.86□□□□□ -0.51
SMAD4-205ENST00000588745 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.86□□□□□ -0.51
SMAD4-205ENST00000588745 GMIPQ9P107 970 aa11.86□□□□□ -0.51
SMAD4-205ENST00000588745 RCOR3Q9P2K3 495 aaPredicted RBP11.86□□□□□ -0.51
SMAD4-205ENST00000588745 HSFX1Q9UBD0 423 aa11.86□□□□□ -0.51
SMAD4-205ENST00000588745 FEZ2Q9UHY8 353 aaPredicted RBP11.86□□□□□ -0.51
SMAD4-205ENST00000588745 ZMYND8Q9ULU4 1186 aaPredicted RBP11.86□□□□□ -0.51
SMAD4-205ENST00000588745 MKI67P46013 3256 aaKnown RBP11.86□□□□□ -0.51
SMAD4-205ENST00000588745 ZNF638Q14966 1978 aaKnown RBP11.85□□□□□ -0.51
SMAD4-205ENST00000588745 APOL1O14791 398 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 IRAK2O43187 625 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 FGF18O76093 207 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 ABLIM3O94929 683 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 GAS8O95995 478 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 ATP2A2P16615 1042 aaKnown RBP11.85□□□□□ -0.51
SMAD4-205ENST00000588745 TGM2P21980 687 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 DNAJB2P25686 324 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 YWHAQP27348 245 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 GBP1P32455 592 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 TUFMP49411 452 aaKnown RBP11.85□□□□□ -0.51
SMAD4-205ENST00000588745 CARSP49589 748 aaKnown RBP11.85□□□□□ -0.51
SMAD4-205ENST00000588745 CXCR3P49682 368 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 VCPP55072 806 aaKnown RBP11.85□□□□□ -0.51
SMAD4-205ENST00000588745 OTUD4Q01804 1114 aaKnown RBP11.85□□□□□ -0.51
SMAD4-205ENST00000588745 KRT17Q04695 432 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 PTK6Q13882 451 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 BYSLQ13895 437 aaKnown RBP11.85□□□□□ -0.51
SMAD4-205ENST00000588745 RAB33AQ14088 237 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 ARL13BQ3SXY8 428 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 ANKRD20A8PQ5CZ79 823 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 DUPD1Q68J44 220 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 SLC9A4Q6AI14 798 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 MSANTD2Q6P1R3 559 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 PQLC3Q8N755 202 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 ATL2Q8NHH9 583 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 PCDH19Q8TAB3 1148 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 ZNF461Q8TAF7 563 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 SLC35B2Q8TB61 432 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 ACTL9Q8TC94 416 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 GPR152Q8TDT2 470 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 NKD2Q969F2 451 aaPredicted RBP11.85□□□□□ -0.51
SMAD4-205ENST00000588745 FBXO32Q969P5 355 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 TTLL2Q9BWV7 592 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 DPH5Q9H2P9 285 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.85□□□□□ -0.51
SMAD4-205ENST00000588745 MRPL17Q9NRX2 175 aaKnown RBP11.85□□□□□ -0.51
SMAD4-205ENST00000588745 ZNF446Q9NWS9 450 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 DNPEPQ9ULA0 475 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 NFU1Q9UMS0 254 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 PLXNA4Q9HCM2 1894 aa11.85□□□□□ -0.51
SMAD4-205ENST00000588745 SLC38A8A6NNN8 435 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 MCF2LO15068 1137 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 DAPK3O43293 454 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 TLL1O43897 1013 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 SEC24AO95486 1093 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 CTSAP10619 480 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 ATF2P15336 505 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 PECAM1P16284 738 aaPredicted RBP11.84□□□□□ -0.51
SMAD4-205ENST00000588745 ECHS1P30084 290 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 ADRA1BP35368 520 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 ARL4AP40617 200 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 PGFP49763 221 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 PSEN1P49768 467 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 LMNB2Q03252 620 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 TAF10Q12962 218 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 EIF4EBP2Q13542 120 aaPredicted RBP11.84□□□□□ -0.51
SMAD4-205ENST00000588745 MTMR3Q13615 1198 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 NOMO1Q15155 1222 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 PPP1R7Q15435 360 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 TRADDQ15628 312 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 OASLQ15646 514 aaKnown RBP11.84□□□□□ -0.51
SMAD4-205ENST00000588745 KCTD19Q17RG1 926 aaPredicted RBP11.84□□□□□ -0.51
SMAD4-205ENST00000588745 EMBQ6PCB8 327 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 PYROXD2Q8N2H3 581 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms