RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 RAPGEFL1Q9UHV5 662 aa16.6■□□□□ 0.25
RABGGTA-206ENST00000558649 LSM7Q9UK45 103 aaKnown RBP16.6■□□□□ 0.25
RABGGTA-206ENST00000558649 STRIP2Q9ULQ0 834 aa16.6■□□□□ 0.25
RABGGTA-206ENST00000558649 MRPS17Q9Y2R5 130 aaKnown RBP16.6■□□□□ 0.25
RABGGTA-206ENST00000558649 SLC12A8A0AV02 714 aa16.59■□□□□ 0.25
RABGGTA-206ENST00000558649 E2F8A0AVK6 867 aa16.59■□□□□ 0.25
RABGGTA-206ENST00000558649 SHISA7A6NL88 538 aa16.59■□□□□ 0.25
RABGGTA-206ENST00000558649 PAPSS1O43252 624 aaPredicted RBP16.59■□□□□ 0.25
RABGGTA-206ENST00000558649 CYP17A1P05093 508 aa16.59■□□□□ 0.25
RABGGTA-206ENST00000558649 SMYD5Q6GMV2 418 aa16.59■□□□□ 0.25
RABGGTA-206ENST00000558649 TXNDC11Q6PKC3 985 aa16.59■□□□□ 0.25
RABGGTA-206ENST00000558649 RALGPS2Q86X27 583 aaPredicted RBP16.59■□□□□ 0.25
RABGGTA-206ENST00000558649 FMNL3Q8IVF7 1028 aa16.59■□□□□ 0.25
RABGGTA-206ENST00000558649 CCDC105Q8IYK2 499 aa16.59■□□□□ 0.25
RABGGTA-206ENST00000558649 TMEM35BQ8NCS4 154 aa16.59■□□□□ 0.25
RABGGTA-206ENST00000558649 IPO4Q8TEX9 1081 aaKnown RBP16.59■□□□□ 0.25
RABGGTA-206ENST00000558649 DDX1Q92499 740 aaKnown RBP16.59■□□□□ 0.25
RABGGTA-206ENST00000558649 IFNKQ9P0W0 207 aa16.59■□□□□ 0.25
RABGGTA-206ENST00000558649 TBC1D14Q9P2M4 693 aa16.59■□□□□ 0.25
RABGGTA-206ENST00000558649 SFMBT1Q9UHJ3 866 aa16.59■□□□□ 0.25
RABGGTA-206ENST00000558649 NOCTQ9UK39 431 aaKnown RBP16.59■□□□□ 0.25
RABGGTA-206ENST00000558649 HCN4Q9Y3Q4 1203 aa16.59■□□□□ 0.25
RABGGTA-206ENST00000558649 A0A1W2PQC6 194 aa16.58■□□□□ 0.24
RABGGTA-206ENST00000558649 SART1O43290 800 aaKnown RBP16.58■□□□□ 0.24
RABGGTA-206ENST00000558649 MSI1O43347 362 aaKnown RBP16.58■□□□□ 0.24
RABGGTA-206ENST00000558649 STC2O76061 302 aa16.58■□□□□ 0.24
RABGGTA-206ENST00000558649 ERBB2P04626 1255 aa16.58■□□□□ 0.24
RABGGTA-206ENST00000558649 NCAM1P13591 858 aa16.58■□□□□ 0.24
RABGGTA-206ENST00000558649 GLULP15104 373 aa16.58■□□□□ 0.24
RABGGTA-206ENST00000558649 COL9A1P20849 921 aa16.58■□□□□ 0.24
RABGGTA-206ENST00000558649 RPL34P49207 117 aaKnown RBP16.58■□□□□ 0.24
RABGGTA-206ENST00000558649 NR1H3Q13133 447 aa16.58■□□□□ 0.24
RABGGTA-206ENST00000558649 NR1I3Q14994 352 aa16.58■□□□□ 0.24
RABGGTA-206ENST00000558649 PTPN20Q4JDL3 420 aa16.58■□□□□ 0.24
RABGGTA-206ENST00000558649 NAIF1Q69YI7 327 aaPredicted RBP16.58■□□□□ 0.24
RABGGTA-206ENST00000558649 OR6B2Q6IFH4 312 aa16.58■□□□□ 0.24
RABGGTA-206ENST00000558649 FAM183BPQ6ZVS7 135 aa16.58■□□□□ 0.24
RABGGTA-206ENST00000558649 TMEM110Q86TL2 294 aa16.58■□□□□ 0.24
RABGGTA-206ENST00000558649 ZNF276Q8N554 614 aa16.58■□□□□ 0.24
RABGGTA-206ENST00000558649 MSANTD3Q96H12 275 aa16.58■□□□□ 0.24
RABGGTA-206ENST00000558649 PIWIL1Q96J94 861 aaKnown RBP16.58■□□□□ 0.24
RABGGTA-206ENST00000558649 SEPT11Q9NVA2 429 aaKnown RBP16.58■□□□□ 0.24
RABGGTA-206ENST00000558649 CAPN9O14815 690 aa16.57■□□□□ 0.24
RABGGTA-206ENST00000558649 GRAP2O75791 330 aa16.57■□□□□ 0.24
RABGGTA-206ENST00000558649 CORO1AP31146 461 aaKnown RBP16.57■□□□□ 0.24
RABGGTA-206ENST00000558649 GJA4P35212 333 aa16.57■□□□□ 0.24
RABGGTA-206ENST00000558649 COG7P83436 770 aa16.57■□□□□ 0.24
RABGGTA-206ENST00000558649 CDR2Q01850 454 aa16.57■□□□□ 0.24
RABGGTA-206ENST00000558649 DHCR24Q15392 516 aa16.57■□□□□ 0.24
RABGGTA-206ENST00000558649 TAF5Q15542 800 aa16.57■□□□□ 0.24
RABGGTA-206ENST00000558649 NAA35Q5VZE5 725 aa16.57■□□□□ 0.24
RABGGTA-206ENST00000558649 HTR3DQ70Z44 454 aa16.57■□□□□ 0.24
RABGGTA-206ENST00000558649 CPA5Q8WXQ8 436 aa16.57■□□□□ 0.24
RABGGTA-206ENST00000558649 CHFRQ96EP1 664 aa16.57■□□□□ 0.24
RABGGTA-206ENST00000558649 NAALADL1Q9UQQ1 740 aa16.57■□□□□ 0.24
RABGGTA-206ENST00000558649 LRRC53A6NM62 1247 aa16.56■□□□□ 0.24
RABGGTA-206ENST00000558649 NCAM2O15394 837 aa16.56■□□□□ 0.24
RABGGTA-206ENST00000558649 GREM1O60565 184 aa16.56■□□□□ 0.24
RABGGTA-206ENST00000558649 LSM8O95777 96 aaKnown RBP16.56■□□□□ 0.24
RABGGTA-206ENST00000558649 ADH1CP00326 375 aa16.56■□□□□ 0.24
RABGGTA-206ENST00000558649 ADH5P11766 374 aa16.56■□□□□ 0.24
RABGGTA-206ENST00000558649 CHRNB2P17787 502 aa16.56■□□□□ 0.24
RABGGTA-206ENST00000558649 MLLT6P55198 1093 aaPredicted RBP16.56■□□□□ 0.24
RABGGTA-206ENST00000558649 SNX16P57768 344 aa16.56■□□□□ 0.24
RABGGTA-206ENST00000558649 AMPD2Q01433 879 aa16.56■□□□□ 0.24
RABGGTA-206ENST00000558649 FMO1Q01740 532 aa16.56■□□□□ 0.24
RABGGTA-206ENST00000558649 ANO4Q32M45 955 aa16.56■□□□□ 0.24
RABGGTA-206ENST00000558649 C2CD6Q53TS8 623 aa16.56■□□□□ 0.24
RABGGTA-206ENST00000558649 LY6G5CQ5SRR4 150 aa16.56■□□□□ 0.24
RABGGTA-206ENST00000558649 C1orf228Q6PIY5 440 aa16.56■□□□□ 0.24
RABGGTA-206ENST00000558649 TPGS1Q6ZTW0 290 aa16.56■□□□□ 0.24
RABGGTA-206ENST00000558649 ERICH1Q86X53 443 aa16.56■□□□□ 0.24
RABGGTA-206ENST00000558649 ZNF677Q86XU0 584 aa16.56■□□□□ 0.24
RABGGTA-206ENST00000558649 DENND1CQ8IV53 801 aa16.56■□□□□ 0.24
RABGGTA-206ENST00000558649 ADGRG2Q8IZP9 1017 aa16.56■□□□□ 0.24
RABGGTA-206ENST00000558649 ADAM32Q8TC27 787 aa16.56■□□□□ 0.24
RABGGTA-206ENST00000558649 BHMTQ93088 406 aa16.56■□□□□ 0.24
RABGGTA-206ENST00000558649 PLD4Q96BZ4 506 aa16.56■□□□□ 0.24
RABGGTA-206ENST00000558649 OTUB2Q96DC9 234 aa16.56■□□□□ 0.24
RABGGTA-206ENST00000558649 NELL2Q99435 816 aa16.56■□□□□ 0.24
RABGGTA-206ENST00000558649 RBM12Q9NTZ6 932 aaKnown RBP16.56■□□□□ 0.24
RABGGTA-206ENST00000558649 KIAA1549LQ6ZVL6 1849 aa16.55■□□□□ 0.24
RABGGTA-206ENST00000558649 KLKB1P03952 638 aa16.55■□□□□ 0.24
RABGGTA-206ENST00000558649 FYNP06241 537 aa16.55■□□□□ 0.24
RABGGTA-206ENST00000558649 FERP16591 822 aa16.55■□□□□ 0.24
RABGGTA-206ENST00000558649 CDH5P33151 784 aaPredicted RBP16.55■□□□□ 0.24
RABGGTA-206ENST00000558649 ZNF445P59923 1031 aa16.55■□□□□ 0.24
RABGGTA-206ENST00000558649 YWHAZP63104 245 aaKnown RBP16.55■□□□□ 0.24
RABGGTA-206ENST00000558649 NOMO3P69849 1222 aa16.55■□□□□ 0.24
RABGGTA-206ENST00000558649 SYPL2Q5VXT5 272 aa16.55■□□□□ 0.24
RABGGTA-206ENST00000558649 MSANTD2Q6P1R3 559 aa16.55■□□□□ 0.24
RABGGTA-206ENST00000558649 RHBDF2Q6PJF5 856 aa16.55■□□□□ 0.24
RABGGTA-206ENST00000558649 Q6ZNB5 142 aa16.55■□□□□ 0.24
RABGGTA-206ENST00000558649 TOGARAM2Q6ZUX3 1019 aa16.55■□□□□ 0.24
RABGGTA-206ENST00000558649 KIAA1958Q8N8K9 716 aa16.55■□□□□ 0.24
RABGGTA-206ENST00000558649 DTWD2Q8NBA8 298 aa16.55■□□□□ 0.24
RABGGTA-206ENST00000558649 MSANTD4Q8NCY6 345 aa16.55■□□□□ 0.24
RABGGTA-206ENST00000558649 DQX1Q8TE96 717 aaKnown RBP16.55■□□□□ 0.24
RABGGTA-206ENST00000558649 BAP1Q92560 729 aa16.55■□□□□ 0.24
RABGGTA-206ENST00000558649 P2RY13Q9BPV8 354 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms