RNA–Protein interactions for RNA: ENST00000475706.5

BRD9-203, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 744 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-203ENST00000475706 GABBR2O75899 941 aa12.14□□□□□ -0.47
BRD9-203ENST00000475706 STC2O76061 302 aa12.14□□□□□ -0.47
BRD9-203ENST00000475706 FBXO21O94952 628 aa12.14□□□□□ -0.47
BRD9-203ENST00000475706 KRT9P35527 623 aa12.14□□□□□ -0.47
BRD9-203ENST00000475706 OPRD1P41143 372 aa12.14□□□□□ -0.47
BRD9-203ENST00000475706 ACADSBP45954 432 aa12.14□□□□□ -0.47
BRD9-203ENST00000475706 CXCL12P48061 93 aa12.14□□□□□ -0.47
BRD9-203ENST00000475706 SLC6A11P48066 632 aa12.14□□□□□ -0.47
BRD9-203ENST00000475706 CCR3P51677 355 aa12.14□□□□□ -0.47
BRD9-203ENST00000475706 SATB1Q01826 763 aa12.14□□□□□ -0.47
BRD9-203ENST00000475706 CCINQ13939 588 aa12.14□□□□□ -0.47
BRD9-203ENST00000475706 GAS6Q14393 721 aa12.14□□□□□ -0.47
BRD9-203ENST00000475706 TPGS1Q6ZTW0 290 aa12.14□□□□□ -0.47
BRD9-203ENST00000475706 ALYREFQ86V81 257 aaKnown RBP12.14□□□□□ -0.47
BRD9-203ENST00000475706 PASD1Q8IV76 773 aa12.14□□□□□ -0.47
BRD9-203ENST00000475706 FMNL3Q8IVF7 1028 aa12.14□□□□□ -0.47
BRD9-203ENST00000475706 MAML2Q8IZL2 1156 aaPredicted RBP12.14□□□□□ -0.47
BRD9-203ENST00000475706 SYNPOQ8N3V7 929 aa12.14□□□□□ -0.47
BRD9-203ENST00000475706 SPEM1Q8N4L4 309 aa12.14□□□□□ -0.47
BRD9-203ENST00000475706 CLEC4CQ8WTT0 213 aa12.14□□□□□ -0.47
BRD9-203ENST00000475706 GOLGA1Q92805 767 aa12.14□□□□□ -0.47
BRD9-203ENST00000475706 IER2Q9BTL4 223 aa12.14□□□□□ -0.47
BRD9-203ENST00000475706 DCLK3Q9C098 648 aa12.14□□□□□ -0.47
BRD9-203ENST00000475706 PDCL3Q9H2J4 239 aa12.14□□□□□ -0.47
BRD9-203ENST00000475706 SPHK2Q9NRA0 654 aa12.14□□□□□ -0.47
BRD9-203ENST00000475706 OLA1Q9NTK5 396 aaKnown RBP12.14□□□□□ -0.47
BRD9-203ENST00000475706 LIMA1Q9UHB6 759 aaKnown RBP12.14□□□□□ -0.47
BRD9-203ENST00000475706 SFMBT1Q9UHJ3 866 aa12.14□□□□□ -0.47
BRD9-203ENST00000475706 FBXO4Q9UKT5 387 aa12.14□□□□□ -0.47
BRD9-203ENST00000475706 R4GN57 208 aa12.14□□□□□ -0.47
BRD9-203ENST00000475706 SDK1Q7Z5N4 2213 aa12.14□□□□□ -0.47
BRD9-203ENST00000475706 EML5Q05BV3 1969 aa12.13□□□□□ -0.47
BRD9-203ENST00000475706 RNF40O75150 1001 aa12.13□□□□□ -0.47
BRD9-203ENST00000475706 LTFP02788 710 aa12.13□□□□□ -0.47
BRD9-203ENST00000475706 APODP05090 189 aa12.13□□□□□ -0.47
BRD9-203ENST00000475706 UCHL3P15374 230 aa12.13□□□□□ -0.47
BRD9-203ENST00000475706 PTMSP20962 102 aa12.13□□□□□ -0.47
BRD9-203ENST00000475706 CORO1AP31146 461 aaKnown RBP12.13□□□□□ -0.47
BRD9-203ENST00000475706 CLCN1P35523 988 aa12.13□□□□□ -0.47
BRD9-203ENST00000475706 KLK7P49862 253 aa12.13□□□□□ -0.47
BRD9-203ENST00000475706 BPIFB4P59827 614 aa12.13□□□□□ -0.47
BRD9-203ENST00000475706 UBXN1Q04323 297 aa12.13□□□□□ -0.47
BRD9-203ENST00000475706 KDSRQ06136 332 aa12.13□□□□□ -0.47
BRD9-203ENST00000475706 PPP2R5DQ14738 602 aa12.13□□□□□ -0.47
BRD9-203ENST00000475706 NCAPHQ15003 741 aa12.13□□□□□ -0.47
BRD9-203ENST00000475706 KLHL40Q2TBA0 621 aa12.13□□□□□ -0.47
BRD9-203ENST00000475706 DPY19L2P1Q6NXN4 242 aa12.13□□□□□ -0.47
BRD9-203ENST00000475706 BHLHA9Q7RTU4 235 aa12.13□□□□□ -0.47
BRD9-203ENST00000475706 SLC47A2Q86VL8 602 aa12.13□□□□□ -0.47
BRD9-203ENST00000475706 TMEM25Q86YD3 366 aa12.13□□□□□ -0.47
BRD9-203ENST00000475706 DENND1CQ8IV53 801 aa12.13□□□□□ -0.47
BRD9-203ENST00000475706 SCUBE3Q8IX30 993 aa12.13□□□□□ -0.47
BRD9-203ENST00000475706 SCML4Q8N228 414 aa12.13□□□□□ -0.47
BRD9-203ENST00000475706 IRGQQ8WZA9 623 aa12.13□□□□□ -0.47
BRD9-203ENST00000475706 FAM149B1Q96BN6 582 aa12.13□□□□□ -0.47
BRD9-203ENST00000475706 PNKPQ96T60 521 aa12.13□□□□□ -0.47
BRD9-203ENST00000475706 ZNF510Q9Y2H8 683 aa12.13□□□□□ -0.47
BRD9-203ENST00000475706 SYCE3A1L190 88 aa12.12□□□□□ -0.47
BRD9-203ENST00000475706 E5RJQ4 531 aa12.12□□□□□ -0.47
BRD9-203ENST00000475706 NEDD8-MDP1E9PL57 170 aa12.12□□□□□ -0.47
BRD9-203ENST00000475706 ATG13O75143 517 aa12.12□□□□□ -0.47
BRD9-203ENST00000475706 KLKB1P03952 638 aa12.12□□□□□ -0.47
BRD9-203ENST00000475706 NBL1P41271 181 aa12.12□□□□□ -0.47
BRD9-203ENST00000475706 MRE11P49959 708 aa12.12□□□□□ -0.47
BRD9-203ENST00000475706 SEC13P55735 322 aa12.12□□□□□ -0.47
BRD9-203ENST00000475706 POLR2FP61218 127 aaKnown RBP12.12□□□□□ -0.47
BRD9-203ENST00000475706 SYCP1Q15431 976 aa12.12□□□□□ -0.47
BRD9-203ENST00000475706 MEA1Q16626 185 aa12.12□□□□□ -0.47
BRD9-203ENST00000475706 GAB4Q2WGN9 574 aa12.12□□□□□ -0.47
BRD9-203ENST00000475706 FBXO43Q4G163 708 aa12.12□□□□□ -0.47
BRD9-203ENST00000475706 TAF3Q5VWG9 929 aa12.12□□□□□ -0.47
BRD9-203ENST00000475706 HEATR6Q6AI08 1181 aaKnown RBP12.12□□□□□ -0.47
BRD9-203ENST00000475706 PKN3Q6P5Z2 889 aa12.12□□□□□ -0.47
BRD9-203ENST00000475706 C12orf40Q86WS4 652 aa12.12□□□□□ -0.47
BRD9-203ENST00000475706 FAM71AQ8IYT1 594 aa12.12□□□□□ -0.47
BRD9-203ENST00000475706 NEK11Q8NG66 645 aa12.12□□□□□ -0.47
BRD9-203ENST00000475706 BHMTQ93088 406 aa12.12□□□□□ -0.47
BRD9-203ENST00000475706 NOX5Q96PH1 765 aa12.12□□□□□ -0.47
BRD9-203ENST00000475706 XPO6Q96QU8 1125 aaKnown RBP12.12□□□□□ -0.47
BRD9-203ENST00000475706 BBS2Q9BXC9 721 aa12.12□□□□□ -0.47
BRD9-203ENST00000475706 SLC4A5Q9BY07 1137 aa12.12□□□□□ -0.47
BRD9-203ENST00000475706 STK33Q9BYT3 514 aa12.12□□□□□ -0.47
BRD9-203ENST00000475706 NLRC4Q9NPP4 1024 aa12.12□□□□□ -0.47
BRD9-203ENST00000475706 PLCB1Q9NQ66 1216 aa12.12□□□□□ -0.47
BRD9-203ENST00000475706 ARHGEF4Q9NR80 690 aa12.12□□□□□ -0.47
BRD9-203ENST00000475706 FAM207AQ9NSI2 230 aaPredicted RBP12.12□□□□□ -0.47
BRD9-203ENST00000475706 CYTH4Q9UIA0 394 aa12.12□□□□□ -0.47
BRD9-203ENST00000475706 PCDHGC3Q9UN70 934 aa12.12□□□□□ -0.47
BRD9-203ENST00000475706 FAM170AA1A519 330 aa12.11□□□□□ -0.47
BRD9-203ENST00000475706 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.11□□□□□ -0.47
BRD9-203ENST00000475706 CAPN9O14815 690 aa12.11□□□□□ -0.47
BRD9-203ENST00000475706 SART1O43290 800 aaKnown RBP12.11□□□□□ -0.47
BRD9-203ENST00000475706 MSI1O43347 362 aaKnown RBP12.11□□□□□ -0.47
BRD9-203ENST00000475706 GREM1O60565 184 aa12.11□□□□□ -0.47
BRD9-203ENST00000475706 TULP3O75386 442 aa12.11□□□□□ -0.47
BRD9-203ENST00000475706 NCAM1P13591 858 aa12.11□□□□□ -0.47
BRD9-203ENST00000475706 ATP1A3P13637 1013 aa12.11□□□□□ -0.47
BRD9-203ENST00000475706 ZNF18P17022 549 aa12.11□□□□□ -0.47
BRD9-203ENST00000475706 RPL34P49207 117 aaKnown RBP12.11□□□□□ -0.47
BRD9-203ENST00000475706 HARS2P49590 506 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms