RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 CDK5RAP1Q96SZ6 601 aaKnown RBP7.21□□□□□ -1.26
SF3A3-205ENST00000470585 FAM213AQ9BRX8 229 aa7.21□□□□□ -1.26
SF3A3-205ENST00000470585 PRDM16Q9HAZ2 1276 aa7.21□□□□□ -1.26
SF3A3-205ENST00000470585 CRTAC1Q9NQ79 661 aa7.21□□□□□ -1.26
SF3A3-205ENST00000470585 FSCN3Q9NQT6 498 aa7.21□□□□□ -1.26
SF3A3-205ENST00000470585 BLOC1S4Q9NUP1 217 aa7.21□□□□□ -1.26
SF3A3-205ENST00000470585 DNAJC17Q9NVM6 304 aaKnown RBP7.21□□□□□ -1.26
SF3A3-205ENST00000470585 INTS13Q9NVM9 706 aa7.21□□□□□ -1.26
SF3A3-205ENST00000470585 SMPD4Q9NXE4 827 aa7.21□□□□□ -1.26
SF3A3-205ENST00000470585 LSM7Q9UK45 103 aaKnown RBP7.21□□□□□ -1.26
SF3A3-205ENST00000470585 HCN2Q9UL51 889 aa7.21□□□□□ -1.26
SF3A3-205ENST00000470585 FNDC3AQ9Y2H6 1198 aaKnown RBP7.21□□□□□ -1.26
SF3A3-205ENST00000470585 NPHP3-ACAD11A0A0J9YXS1 232 aa7.2□□□□□ -1.26
SF3A3-205ENST00000470585 ATXN1LP0C7T5 689 aaKnown RBP7.2□□□□□ -1.26
SF3A3-205ENST00000470585 TYRP14679 529 aa7.2□□□□□ -1.26
SF3A3-205ENST00000470585 ACO1P21399 889 aaKnown RBP7.2□□□□□ -1.26
SF3A3-205ENST00000470585 ATICP31939 592 aa7.2□□□□□ -1.26
SF3A3-205ENST00000470585 GNL1P36915 607 aaPredicted RBP7.2□□□□□ -1.26
SF3A3-205ENST00000470585 DGKGP49619 791 aa7.2□□□□□ -1.26
SF3A3-205ENST00000470585 TPMTP51580 245 aa7.2□□□□□ -1.26
SF3A3-205ENST00000470585 FOSBP53539 338 aa7.2□□□□□ -1.26
SF3A3-205ENST00000470585 SNRPFP62306 86 aaKnown RBP7.2□□□□□ -1.26
SF3A3-205ENST00000470585 RHDQ02161 417 aa7.2□□□□□ -1.26
SF3A3-205ENST00000470585 CYP27A1Q02318 531 aa7.2□□□□□ -1.26
SF3A3-205ENST00000470585 ZRSR1Q15695 479 aaKnown RBP7.2□□□□□ -1.26
SF3A3-205ENST00000470585 ANO4Q32M45 955 aa7.2□□□□□ -1.26
SF3A3-205ENST00000470585 DCAF12L1Q5VU92 463 aa7.2□□□□□ -1.26
SF3A3-205ENST00000470585 KIAA1324Q6UXG2 1013 aaKnown RBP7.2□□□□□ -1.26
SF3A3-205ENST00000470585 STXBP4Q6ZWJ1 553 aa7.2□□□□□ -1.26
SF3A3-205ENST00000470585 GPR155Q7Z3F1 870 aa7.2□□□□□ -1.26
SF3A3-205ENST00000470585 TADA2BQ86TJ2 420 aa7.2□□□□□ -1.26
SF3A3-205ENST00000470585 TMEM25Q86YD3 366 aa7.2□□□□□ -1.26
SF3A3-205ENST00000470585 MIB1Q86YT6 1006 aa7.2□□□□□ -1.26
SF3A3-205ENST00000470585 BBS7Q8IWZ6 715 aa7.2□□□□□ -1.26
SF3A3-205ENST00000470585 ZNF843Q8N446 348 aa7.2□□□□□ -1.26
SF3A3-205ENST00000470585 ZCCHC9Q8N567 271 aaKnown RBP7.2□□□□□ -1.26
SF3A3-205ENST00000470585 PRCCQ92733 491 aaPredicted RBP7.2□□□□□ -1.26
SF3A3-205ENST00000470585 SKA1Q96BD8 255 aa7.2□□□□□ -1.26
SF3A3-205ENST00000470585 TNIP3Q96KP6 325 aa7.2□□□□□ -1.26
SF3A3-205ENST00000470585 BBS2Q9BXC9 721 aa7.2□□□□□ -1.26
SF3A3-205ENST00000470585 SLC2A11Q9BYW1 496 aa7.2□□□□□ -1.26
SF3A3-205ENST00000470585 MTMR12Q9C0I1 747 aa7.2□□□□□ -1.26
SF3A3-205ENST00000470585 SNX25Q9H3E2 840 aa7.2□□□□□ -1.26
SF3A3-205ENST00000470585 VRTNQ9H8Y1 702 aa7.2□□□□□ -1.26
SF3A3-205ENST00000470585 PNPLA8Q9NP80 782 aa7.2□□□□□ -1.26
SF3A3-205ENST00000470585 DMAP1Q9NPF5 467 aaPredicted RBP7.2□□□□□ -1.26
SF3A3-205ENST00000470585 CYLDQ9NQC7 956 aa7.2□□□□□ -1.26
SF3A3-205ENST00000470585 THAP10Q9P2Z0 257 aaPredicted RBP7.2□□□□□ -1.26
SF3A3-205ENST00000470585 ARID1BQ8NFD5 2236 aaPredicted RBP7.19□□□□□ -1.26
SF3A3-205ENST00000470585 TLN1Q9Y490 2541 aaKnown RBP7.19□□□□□ -1.26
SF3A3-205ENST00000470585 AHCTF1Q8WYP5 2266 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 ANTXRLA6NF34 631 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 ZNF233A6NK53 670 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 SYNCRIPO60506 623 aaKnown RBP7.19□□□□□ -1.26
SF3A3-205ENST00000470585 GREM1O60565 184 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 TLR5O60602 858 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 ATP2C2O75185 946 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 PENKP01210 267 aaPredicted RBP7.19□□□□□ -1.26
SF3A3-205ENST00000470585 KRT19P08727 400 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 CISD3P0C7P0 127 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 ACADMP11310 421 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 PTPN1P18031 435 aaKnown RBP7.19□□□□□ -1.26
SF3A3-205ENST00000470585 TRIM21P19474 475 aaKnown RBP7.19□□□□□ -1.26
SF3A3-205ENST00000470585 LMO2P25791 158 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 CHKAP35790 457 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 ZNF445P59923 1031 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 PSMC1P62191 440 aaKnown RBP7.19□□□□□ -1.26
SF3A3-205ENST00000470585 BNC1Q01954 994 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 GRIN1Q05586 938 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 SFSWAPQ12872 951 aaKnown RBP7.19□□□□□ -1.26
SF3A3-205ENST00000470585 FUT11Q495W5 492 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 PKDCCQ504Y2 493 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 MDH1BQ5I0G3 518 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 DYMQ7RTS9 669 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 GPD1LQ8N335 351 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 B3GALNT2Q8NCR0 500 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 SNRNP27Q8WVK2 155 aaKnown RBP7.19□□□□□ -1.26
SF3A3-205ENST00000470585 RFFLQ8WZ73 363 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 GOLGA1Q92805 767 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 SIPA1Q96FS4 1042 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 SMARCD1Q96GM5 515 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 GPR174Q9BXC1 333 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 IRX2Q9BZI1 471 aaPredicted RBP7.19□□□□□ -1.26
SF3A3-205ENST00000470585 DCLK3Q9C098 648 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 NACA2Q9H009 215 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 MRPL44Q9H9J2 332 aaKnown RBP7.19□□□□□ -1.26
SF3A3-205ENST00000470585 CSNK1G1Q9HCP0 422 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 TLR8Q9NR97 1041 aaKnown RBP7.19□□□□□ -1.26
SF3A3-205ENST00000470585 TBC1D7Q9P0N9 293 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 FTSJ1Q9UET6 329 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 SCML1Q9UN30 329 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 ANKRD6Q9Y2G4 727 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 STON1Q9Y6Q2 735 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 ATMQ13315 3056 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 LRRK2Q5S007 2527 aa7.19□□□□□ -1.26
SF3A3-205ENST00000470585 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.18□□□□□ -1.26
SF3A3-205ENST00000470585 FRMD3A2A2Y4 597 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 TISP43B9A030 160 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 PRRT4C9JH25 899 aa7.18□□□□□ -1.26
SF3A3-205ENST00000470585 NEDD8-MDP1E9PL57 170 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms