RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 PDR5P33302 1511 aaKnown RBP-8.22□□□□□ -3.73
snR53snR53 BCK1Q01389 1478 aa-8.24□□□□□ -3.73
snR53snR53 SSK2P53599 1579 aa-8.25□□□□□ -3.73
snR53snR53 CWP2P43497 92 aa-8.29□□□□□ -3.74
snR53snR53 LTE1P07866 1435 aa-8.32□□□□□ -3.74
snR53snR53 ULS1Q08562 1619 aa-8.36□□□□□ -3.75
snR53snR53 YCR075W-AQ3E830 75 aa-8.36□□□□□ -3.75
snR53snR53 YOL131WQ08270 108 aa-8.37□□□□□ -3.75
snR53snR53 YOL166W-AQ8TGJ1 51 aa-8.37□□□□□ -3.75
snR53snR53 DOP1Q03921 1698 aa-8.4□□□□□ -3.75
snR53snR53 YCF1P39109 1515 aaKnown RBP-8.41□□□□□ -3.76
snR53snR53 ESC1Q03661 1658 aaKnown RBP-8.43□□□□□ -3.76
snR53snR53 IML1P47170 1584 aa-8.46□□□□□ -3.76
snR53snR53 TCB3Q03640 1545 aaKnown RBP-8.46□□□□□ -3.76
snR53snR53 VMR1P38735 1592 aa-8.49□□□□□ -3.77
snR53snR53 GCN2P15442 1659 aa-8.6□□□□□ -3.79
snR53snR53 ZEO1Q08245 113 aa-8.63□□□□□ -3.79
snR53snR53 UFD4P33202 1483 aa-8.67□□□□□ -3.8
snR53snR53 YJL133C-AQ3E7A3 74 aa-8.72□□□□□ -3.81
snR53snR53 YSY6P38374 65 aa-8.76□□□□□ -3.81
snR53snR53 NUP188P52593 1655 aaKnown RBP-8.76□□□□□ -3.81
snR53snR53 YFL041W-AQ3E817 63 aa-8.78□□□□□ -3.81
snR53snR53 YPR010C-AA5Z2X5 72 aa-8.81□□□□□ -3.82
snR53snR53 YBT1P32386 1661 aa-8.9□□□□□ -3.83
snR53snR53 CDC25P04821 1589 aa-8.99□□□□□ -3.85
snR53snR53 STU1P38198 1513 aa-9.08□□□□□ -3.86
snR53snR53 DDR2P89113 61 aa-9.13□□□□□ -3.87
snR53snR53 SCC2Q04002 1493 aa-9.14□□□□□ -3.87
snR53snR53 YIL102C-AQ2V2P5 75 aa-9.19□□□□□ -3.88
snR53snR53 ATG2P53855 1592 aa-9.25□□□□□ -3.89
snR53snR53 COX9P07255 59 aa-9.32□□□□□ -3.9
snR53snR53 YHR213W-AQ8TGT4 77 aa-9.35□□□□□ -3.91
snR53snR53 TOM1Q03280 3268 aa-9.43□□□□□ -3.92
snR53snR53 BUD3P25558 1636 aa-9.46□□□□□ -3.92
snR53snR53 NUP159P40477 1460 aa-9.48□□□□□ -3.93
snR53snR53 HIR3P47171 1648 aa-9.53□□□□□ -3.94
snR53snR53 PAI3P01094 68 aa-9.66□□□□□ -3.96
snR53snR53 YLL066W-BQ8TGJ7 56 aa-9.69□□□□□ -3.96
snR53snR53 MYO4P32492 1471 aa-9.7□□□□□ -3.96
snR53snR53 YLR342W-AQ3E810 57 aa-9.74□□□□□ -3.97
snR53snR53 YJL127C-BQ3E828 52 aa-9.83□□□□□ -3.98
snR53snR53 NUP170P38181 1502 aa-9.87□□□□□ -3.99
snR53snR53 SKI3P17883 1432 aaKnown RBP-9.87□□□□□ -3.99
snR53snR53 PMP3P87284 55 aa-9.98□□□□□ -4.01
snR53snR53 YKL023C-AQ2V2P3 75 aa-10.07□□□□□ -4.02
snR53snR53 PEP1P32319 1579 aa-10.18□□□□□ -4.04
snR53snR53 USO1P25386 1790 aa-10.22□□□□□ -4.05
snR53snR53 VMA9Q3E7B6 73 aa-10.26□□□□□ -4.05
snR53snR53 NUP192P47054 1683 aa-10.28□□□□□ -4.05
snR53snR53 MON2P48563 1636 aaPredicted RBP-10.46□□□□□ -4.08
snR53snR53 SMX2P40204 77 aaKnown RBP-10.49□□□□□ -4.09
snR53snR53 HOR7Q05827 59 aa-10.54□□□□□ -4.1
snR53snR53 CHC1P22137 1653 aaKnown RBP-10.67□□□□□ -4.12
snR53snR53 RKR1Q04781 1562 aa-10.69□□□□□ -4.12
snR53snR53 SPT6P23615 1451 aaKnown RBP-10.91□□□□□ -4.16
snR53snR53 MLP2P40457 1679 aa-10.96□□□□□ -4.16
snR53snR53 TOM7P53507 60 aa-10.97□□□□□ -4.17
snR53snR53 YFR010W-AP0C5N0 62 aa-11.14□□□□□ -4.19
snR53snR53 NCE101Q02820 53 aa-12.25□□□□□ -4.37
snR53snR53 Q0297Q9ZZV8 51 aa-12.92□□□□□ -4.48
snR53snR53 RPL39P04650 51 aa-13.02□□□□□ -4.49
snR53snR53 YIL046W-AQ3E7Z4 54 aa-14.15□□□□□ -4.67
snR53snR53 YDR034W-BQ6Q5X2 51 aa-16.02□□□□□ -4.97
Retrieved 63 of 5,963 RNA–protein pairs in 48.3 ms