RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 PDR5P33302 1511 aaKnown RBP-2.96□□□□□ -2.88
snR50snR50 YHR073W-AP0C5N7 58 aa-2.96□□□□□ -2.88
snR50snR50 YOL166W-AQ8TGJ1 51 aa-2.98□□□□□ -2.89
snR50snR50 ESP1Q03018 1630 aa-2.99□□□□□ -2.89
snR50snR50 MLP1Q02455 1875 aaKnown RBP-2.99□□□□□ -2.89
snR50snR50 RRP5Q05022 1729 aaKnown RBP-2.99□□□□□ -2.89
snR50snR50 BCK1Q01389 1478 aa-3.02□□□□□ -2.89
snR50snR50 IML1P47170 1584 aa-3.04□□□□□ -2.9
snR50snR50 YSY6P38374 65 aa-3.04□□□□□ -2.9
snR50snR50 YFL041W-AQ3E817 63 aa-3.04□□□□□ -2.9
snR50snR50 YCF1P39109 1515 aaKnown RBP-3.05□□□□□ -2.9
snR50snR50 UFD4P33202 1483 aa-3.06□□□□□ -2.9
snR50snR50 SSK2P53599 1579 aa-3.07□□□□□ -2.9
snR50snR50 YJL133C-AQ3E7A3 74 aa-3.09□□□□□ -2.9
snR50snR50 VPS13Q07878 3144 aa-3.1□□□□□ -2.91
snR50snR50 ULS1Q08562 1619 aa-3.11□□□□□ -2.91
snR50snR50 DOP1Q03921 1698 aa-3.11□□□□□ -2.91
snR50snR50 TCB3Q03640 1545 aaKnown RBP-3.12□□□□□ -2.91
snR50snR50 YPR010C-AA5Z2X5 72 aa-3.12□□□□□ -2.91
snR50snR50 VMR1P38735 1592 aa-3.12□□□□□ -2.91
snR50snR50 ESC1Q03661 1658 aaKnown RBP-3.15□□□□□ -2.91
snR50snR50 YIL102C-AQ2V2P5 75 aa-3.21□□□□□ -2.92
snR50snR50 YHR213W-AQ8TGT4 77 aa-3.25□□□□□ -2.93
snR50snR50 GCN2P15442 1659 aa-3.26□□□□□ -2.93
snR50snR50 DDR2P89113 61 aa-3.26□□□□□ -2.93
snR50snR50 COX9P07255 59 aa-3.28□□□□□ -2.93
snR50snR50 STU1P38198 1513 aa-3.3□□□□□ -2.94
snR50snR50 NUP188P52593 1655 aaKnown RBP-3.3□□□□□ -2.94
snR50snR50 CDC25P04821 1589 aa-3.33□□□□□ -2.94
snR50snR50 YBT1P32386 1661 aa-3.33□□□□□ -2.94
snR50snR50 SCC2Q04002 1493 aa-3.35□□□□□ -2.94
snR50snR50 PAI3P01094 68 aa-3.35□□□□□ -2.95
snR50snR50 NUP159P40477 1460 aa-3.4□□□□□ -2.95
snR50snR50 ATG2P53855 1592 aa-3.42□□□□□ -2.96
snR50snR50 MYO4P32492 1471 aa-3.47□□□□□ -2.97
snR50snR50 YLR342W-AQ3E810 57 aa-3.48□□□□□ -2.97
snR50snR50 YJL127C-BQ3E828 52 aa-3.53□□□□□ -2.97
snR50snR50 SKI3P17883 1432 aaKnown RBP-3.53□□□□□ -2.98
snR50snR50 BUD3P25558 1636 aa-3.54□□□□□ -2.98
snR50snR50 PMP3P87284 55 aa-3.56□□□□□ -2.98
snR50snR50 YLL066W-BQ8TGJ7 56 aa-3.59□□□□□ -2.98
snR50snR50 YKL023C-AQ2V2P3 75 aa-3.6□□□□□ -2.99
snR50snR50 HIR3P47171 1648 aa-3.6□□□□□ -2.99
snR50snR50 NUP170P38181 1502 aa-3.61□□□□□ -2.99
snR50snR50 VMA9Q3E7B6 73 aa-3.63□□□□□ -2.99
snR50snR50 TOM1Q03280 3268 aa-3.71□□□□□ -3
snR50snR50 SMX2P40204 77 aaKnown RBP-3.73□□□□□ -3.01
snR50snR50 PEP1P32319 1579 aa-3.75□□□□□ -3.01
snR50snR50 NUP192P47054 1683 aa-3.83□□□□□ -3.02
snR50snR50 HOR7Q05827 59 aa-3.83□□□□□ -3.02
snR50snR50 USO1P25386 1790 aa-3.88□□□□□ -3.03
snR50snR50 MON2P48563 1636 aaPredicted RBP-3.92□□□□□ -3.04
snR50snR50 YFR010W-AP0C5N0 62 aa-3.97□□□□□ -3.04
snR50snR50 RKR1Q04781 1562 aa-3.98□□□□□ -3.05
snR50snR50 SPT6P23615 1451 aaKnown RBP-3.98□□□□□ -3.05
snR50snR50 TOM7P53507 60 aa-4.01□□□□□ -3.05
snR50snR50 CHC1P22137 1653 aaKnown RBP-4.06□□□□□ -3.06
snR50snR50 MLP2P40457 1679 aa-4.2□□□□□ -3.08
snR50snR50 NCE101Q02820 53 aa-4.51□□□□□ -3.13
snR50snR50 RPL39P04650 51 aa-4.82□□□□□ -3.18
snR50snR50 Q0297Q9ZZV8 51 aa-4.87□□□□□ -3.19
snR50snR50 YIL046W-AQ3E7Z4 54 aa-5.37□□□□□ -3.27
snR50snR50 YDR034W-BQ6Q5X2 51 aa-6.2□□□□□ -3.4
Retrieved 63 of 5,963 RNA–protein pairs in 148.1 ms