RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B IQG1Q12280 1495 aa-2.84□□□□□ -2.86
snR39BsnR39B ERI1P62651 68 aaKnown RBP-2.84□□□□□ -2.86
snR39BsnR39B YMR175W-AQ3E766 64 aa-2.84□□□□□ -2.86
snR39BsnR39B YLL066W-BQ8TGJ7 56 aa-2.85□□□□□ -2.87
snR39BsnR39B GEA2P39993 1459 aaKnown RBP-2.85□□□□□ -2.87
snR39BsnR39B YCL001W-BQ96VH2 84 aa-2.86□□□□□ -2.87
snR39BsnR39B DOP1Q03921 1698 aa-2.86□□□□□ -2.87
snR39BsnR39B TSC11P40061 1430 aa-2.86□□□□□ -2.87
snR39BsnR39B YPR010C-AA5Z2X5 72 aa-2.87□□□□□ -2.87
snR39BsnR39B ARO1P08566 1588 aaKnown RBP-2.87□□□□□ -2.87
snR39BsnR39B DDR2P89113 61 aa-2.88□□□□□ -2.87
snR39BsnR39B YOL166W-AQ8TGJ1 51 aa-2.88□□□□□ -2.87
snR39BsnR39B MMS22Q06164 1454 aa-2.89□□□□□ -2.87
snR39BsnR39B MLP1Q02455 1875 aaKnown RBP-2.89□□□□□ -2.87
snR39BsnR39B YFL041W-AQ3E817 63 aa-2.89□□□□□ -2.87
snR39BsnR39B TCB3Q03640 1545 aaKnown RBP-2.91□□□□□ -2.88
snR39BsnR39B CDC25P04821 1589 aa-2.91□□□□□ -2.88
snR39BsnR39B RRP5Q05022 1729 aaKnown RBP-2.92□□□□□ -2.88
snR39BsnR39B COX9P07255 59 aa-2.92□□□□□ -2.88
snR39BsnR39B STU1P38198 1513 aa-2.93□□□□□ -2.88
snR39BsnR39B CWP2P43497 92 aa-2.94□□□□□ -2.88
snR39BsnR39B LTE1P07866 1435 aa-2.95□□□□□ -2.88
snR39BsnR39B PMP3P87284 55 aa-2.98□□□□□ -2.89
snR39BsnR39B UFD4P33202 1483 aa-2.98□□□□□ -2.89
snR39BsnR39B YSY6P38374 65 aa-2.99□□□□□ -2.89
snR39BsnR39B NUP159P40477 1460 aa-2.99□□□□□ -2.89
snR39BsnR39B NUP188P52593 1655 aaKnown RBP-3.01□□□□□ -2.89
snR39BsnR39B VMR1P38735 1592 aa-3.03□□□□□ -2.89
snR39BsnR39B IML1P47170 1584 aa-3.03□□□□□ -2.89
snR39BsnR39B YJL127C-BQ3E828 52 aa-3.03□□□□□ -2.89
snR39BsnR39B HIR3P47171 1648 aa-3.04□□□□□ -2.9
snR39BsnR39B MYO4P32492 1471 aa-3.05□□□□□ -2.9
snR39BsnR39B YLR342W-AQ3E810 57 aa-3.06□□□□□ -2.9
snR39BsnR39B YBT1P32386 1661 aa-3.08□□□□□ -2.9
snR39BsnR39B ATG2P53855 1592 aa-3.08□□□□□ -2.9
snR39BsnR39B YCR075W-AQ3E830 75 aa-3.09□□□□□ -2.9
snR39BsnR39B NUP192P47054 1683 aa-3.11□□□□□ -2.91
snR39BsnR39B YKL023C-AQ2V2P3 75 aa-3.11□□□□□ -2.91
snR39BsnR39B YIL102C-AQ2V2P5 75 aa-3.12□□□□□ -2.91
snR39BsnR39B TOM7P53507 60 aa-3.13□□□□□ -2.91
snR39BsnR39B ZEO1Q08245 113 aa-3.15□□□□□ -2.91
snR39BsnR39B BUD3P25558 1636 aa-3.16□□□□□ -2.92
snR39BsnR39B HOR7Q05827 59 aa-3.18□□□□□ -2.92
snR39BsnR39B YHR213W-AQ8TGT4 77 aa-3.2□□□□□ -2.92
snR39BsnR39B SKI3P17883 1432 aaKnown RBP-3.21□□□□□ -2.92
snR39BsnR39B SCC2Q04002 1493 aa-3.22□□□□□ -2.92
snR39BsnR39B SMX2P40204 77 aaKnown RBP-3.22□□□□□ -2.92
snR39BsnR39B MON2P48563 1636 aaPredicted RBP-3.24□□□□□ -2.93
snR39BsnR39B NUP170P38181 1502 aa-3.27□□□□□ -2.93
snR39BsnR39B CHC1P22137 1653 aaKnown RBP-3.28□□□□□ -2.93
snR39BsnR39B PAI3P01094 68 aa-3.32□□□□□ -2.94
snR39BsnR39B SPT6P23615 1451 aaKnown RBP-3.33□□□□□ -2.94
snR39BsnR39B PEP1P32319 1579 aa-3.36□□□□□ -2.95
snR39BsnR39B USO1P25386 1790 aa-3.38□□□□□ -2.95
snR39BsnR39B MLP2P40457 1679 aa-3.45□□□□□ -2.96
snR39BsnR39B RKR1Q04781 1562 aa-3.45□□□□□ -2.96
snR39BsnR39B VMA9Q3E7B6 73 aa-3.48□□□□□ -2.97
snR39BsnR39B Q0297Q9ZZV8 51 aa-3.54□□□□□ -2.98
snR39BsnR39B NCE101Q02820 53 aa-3.66□□□□□ -3
snR39BsnR39B RPL39P04650 51 aa-3.72□□□□□ -3
snR39BsnR39B YFR010W-AP0C5N0 62 aa-3.78□□□□□ -3.01
snR39BsnR39B YIL046W-AQ3E7Z4 54 aa-3.92□□□□□ -3.04
snR39BsnR39B YDR034W-BQ6Q5X2 51 aa-4.22□□□□□ -3.08
Retrieved 63 of 5,963 RNA–protein pairs in 10.8 ms