RNA–Protein interactions for RNA: YPL230W

USV1, Transcript of Putative transcription factor containing a C2H2 zinc finger, yeastyeast

Gene USV1, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USV1YPL230W YBT1P32386 1661 aa0.37□□□□□ -2.35
USV1YPL230W USO1P25386 1790 aa0.32□□□□□ -2.36
USV1YPL230W YOR093CQ12275 1648 aa0.32□□□□□ -2.36
USV1YPL230W COX9P07255 59 aa0.32□□□□□ -2.36
USV1YPL230W SSK2P53599 1579 aa0.31□□□□□ -2.36
USV1YPL230W TY1B-DR4Q07793 1604 aa0.31□□□□□ -2.36
USV1YPL230W SMX2P40204 77 aaKnown RBP0.28□□□□□ -2.36
USV1YPL230W YHR050W-AQ05451 56 aa0.28□□□□□ -2.36
USV1YPL230W MON2P48563 1636 aaPredicted RBP0.27□□□□□ -2.37
USV1YPL230W YOR316C-AQ3E806 69 aa0.26□□□□□ -2.37
USV1YPL230W YDR034C-AP0C289 58 aa0.25□□□□□ -2.37
USV1YPL230W YJL133C-AQ3E7A3 74 aa0.25□□□□□ -2.37
USV1YPL230W YML054C-AQ3E809 52 aa0.25□□□□□ -2.37
USV1YPL230W YLR342W-AQ3E810 57 aa0.25□□□□□ -2.37
USV1YPL230W ULS1Q08562 1619 aa0.24□□□□□ -2.37
USV1YPL230W DDR2P89113 61 aa0.24□□□□□ -2.37
USV1YPL230W RKR1Q04781 1562 aa0.23□□□□□ -2.37
USV1YPL230W NUP192P47054 1683 aa0.23□□□□□ -2.37
USV1YPL230W RPL29P05747 59 aaPredicted RBP0.22□□□□□ -2.37
USV1YPL230W YJL127C-BQ3E828 52 aa0.22□□□□□ -2.37
USV1YPL230W Q0017Q9ZZX8 53 aa0.22□□□□□ -2.37
USV1YPL230W NUP188P52593 1655 aaKnown RBP0.21□□□□□ -2.38
USV1YPL230W STU1P38198 1513 aa0.21□□□□□ -2.38
USV1YPL230W GCN2P15442 1659 aa0.21□□□□□ -2.38
USV1YPL230W NUP170P38181 1502 aa0.2□□□□□ -2.38
USV1YPL230W PMP3P87284 55 aa0.2□□□□□ -2.38
USV1YPL230W PEP1P32319 1579 aa0.19□□□□□ -2.38
USV1YPL230W MEC1P38111 2368 aa0.19□□□□□ -2.38
USV1YPL230W YPR117WQ06116 2489 aa0.19□□□□□ -2.38
USV1YPL230W BUD3P25558 1636 aa0.18□□□□□ -2.38
USV1YPL230W TOR2P32600 2474 aaKnown RBP0.18□□□□□ -2.38
USV1YPL230W ATG2P53855 1592 aa0.18□□□□□ -2.38
USV1YPL230W HIR3P47171 1648 aa0.17□□□□□ -2.38
USV1YPL230W YHR073W-AP0C5N7 58 aa0.17□□□□□ -2.38
USV1YPL230W FLO1P32768 1537 aa0.16□□□□□ -2.38
USV1YPL230W FIG2P25653 1609 aa0.16□□□□□ -2.38
USV1YPL230W THO2P53552 1597 aaKnown RBP0.15□□□□□ -2.38
USV1YPL230W TOM7P53507 60 aa0.15□□□□□ -2.39
USV1YPL230W YMR105W-AQ8TGS8 64 aa0.15□□□□□ -2.39
USV1YPL230W CHC1P22137 1653 aaKnown RBP0.14□□□□□ -2.39
USV1YPL230W HOR7Q05827 59 aa0.13□□□□□ -2.39
USV1YPL230W MLP2P40457 1679 aa0.11□□□□□ -2.39
USV1YPL230W FMP27Q06179 2628 aa0.1□□□□□ -2.39
USV1YPL230W NCE101Q02820 53 aa0.07□□□□□ -2.4
USV1YPL230W CUP1-1P0CX80 61 aa0.04□□□□□ -2.4
USV1YPL230W CUP1-2P0CX81 61 aa0.04□□□□□ -2.4
USV1YPL230W CSF1Q12150 2958 aa0.01□□□□□ -2.41
USV1YPL230W YLL066W-BQ8TGJ7 56 aa0.01□□□□□ -2.41
USV1YPL230W GCN1P33892 2672 aaKnown RBP-0.01□□□□□ -2.41
USV1YPL230W TEL1P38110 2787 aa-0.01□□□□□ -2.41
USV1YPL230W YBR056W-AI2HB52 66 aa-0.02□□□□□ -2.41
USV1YPL230W RPL39P04650 51 aa-0.05□□□□□ -2.42
USV1YPL230W NUM1Q00402 2748 aa-0.06□□□□□ -2.42
USV1YPL230W IRA2P19158 3079 aa-0.12□□□□□ -2.43
USV1YPL230W IRA1P18963 3092 aa-0.14□□□□□ -2.43
USV1YPL230W DYN1P36022 4092 aa-0.17□□□□□ -2.44
USV1YPL230W VPS13Q07878 3144 aa-0.2□□□□□ -2.44
USV1YPL230W TRA1P38811 3744 aa-0.22□□□□□ -2.44
USV1YPL230W Q0297Q9ZZV8 51 aa-0.23□□□□□ -2.45
USV1YPL230W YIL046W-AQ3E7Z4 54 aa-0.24□□□□□ -2.45
USV1YPL230W MDN1Q12019 4910 aaKnown RBP-0.26□□□□□ -2.45
USV1YPL230W TOM1Q03280 3268 aa-0.33□□□□□ -2.46
USV1YPL230W YDR034W-BQ6Q5X2 51 aa-0.59□□□□□ -2.5
Retrieved 63 of 5,963 RNA–protein pairs in 11.9 ms