RNA–Protein interactions for RNA: YOR217W

RFC1, Transcript of Subunit of heteropentameric Replication factor C (RF-C), yeast

Gene RFC1, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RFC1	YOR217W	YOR011W-A	Q3E807	68 aa		5.18	□□□□□ -1.58
RFC1	YOR217W	VPS13	Q07878	3144 aa		5.18	□□□□□ -1.58
RFC1	YOR217W	YAR064W	P39563	99 aa		5.15	□□□□□ -1.58
RFC1	YOR217W	YOR394C-A	Q8TGJ0	55 aa		5.15	□□□□□ -1.58
RFC1	YOR217W	RPC10	P40422	70 aa		5.15	□□□□□ -1.59
RFC1	YOR217W	IRA2	P19158	3079 aa		5.14	□□□□□ -1.59
RFC1	YOR217W	COX7	P10174	60 aa		5.13	□□□□□ -1.59
RFC1	YOR217W	YCR108C	Q3E819	63 aa		5.11	□□□□□ -1.59
RFC1	YOR217W	YMR105W-A	Q8TGS8	64 aa		5.11	□□□□□ -1.59
RFC1	YOR217W	RPL39	P04650	51 aa		5.08	□□□□□ -1.6
RFC1	YOR217W	YMR230W-A	Q3E7B5	62 aa		5.08	□□□□□ -1.6
RFC1	YOR217W	YPR117W	Q06116	2489 aa		5.07	□□□□□ -1.6
RFC1	YOR217W	YBL044W	P38194	122 aa		5.03	□□□□□ -1.6
RFC1	YOR217W	YNL162W-A	Q3E7A8	72 aa		5.01	□□□□□ -1.61
RFC1	YOR217W	YGL260W	P53056	76 aa		4.99	□□□□□ -1.61
RFC1	YOR217W	YJL127C-B	Q3E828	52 aa		4.99	□□□□□ -1.61
RFC1	YOR217W	YBR230W-A	Q3E762	66 aa		4.96	□□□□□ -1.62
RFC1	YOR217W	FMP27	Q06179	2628 aa		4.94	□□□□□ -1.62
RFC1	YOR217W	YNL146C-A	Q3E7Z1	64 aa		4.91	□□□□□ -1.62
RFC1	YOR217W	RPL29	P05747	59 aa	Predicted RBP	4.88	□□□□□ -1.63
RFC1	YOR217W	HOR7	Q05827	59 aa		4.86	□□□□□ -1.63
RFC1	YOR217W	CSF1	Q12150	2958 aa		4.86	□□□□□ -1.63
RFC1	YOR217W	DDR2	P89113	61 aa		4.86	□□□□□ -1.63
RFC1	YOR217W	Q0297	Q9ZZV8	51 aa		4.84	□□□□□ -1.63
RFC1	YOR217W	MEC1	P38111	2368 aa		4.84	□□□□□ -1.63
RFC1	YOR217W	OLI1	P61829	76 aa		4.83	□□□□□ -1.64
RFC1	YOR217W	YJL009W	P47078	108 aa		4.83	□□□□□ -1.64
RFC1	YOR217W	YGR146C-A	Q8TGT9	53 aa		4.82	□□□□□ -1.64
RFC1	YOR217W	PMP3	P87284	55 aa		4.79	□□□□□ -1.64
RFC1	YOR217W	IRA1	P18963	3092 aa		4.79	□□□□□ -1.64
RFC1	YOR217W	YLR307C-A	Q3E825	87 aa		4.77	□□□□□ -1.65
RFC1	YOR217W	YBR016W	P38216	128 aa		4.76	□□□□□ -1.65
RFC1	YOR217W	RPL37B	P51402	88 aa	Known RBP	4.75	□□□□□ -1.65
RFC1	YOR217W	TRA1	P38811	3744 aa		4.74	□□□□□ -1.65
RFC1	YOR217W	PRP8	P33334	2413 aa	Known RBP	4.74	□□□□□ -1.65
RFC1	YOR217W	YBR056W-A	I2HB52	66 aa		4.73	□□□□□ -1.65
RFC1	YOR217W	YHR212W-A	P0CX91	67 aa		4.73	□□□□□ -1.65
RFC1	YOR217W	TOR2	P32600	2474 aa	Known RBP	4.72	□□□□□ -1.65
RFC1	YOR217W	GCN1	P33892	2672 aa	Known RBP	4.69	□□□□□ -1.66
RFC1	YOR217W	YHR086W-A	Q3E746	53 aa		4.68	□□□□□ -1.66
RFC1	YOR217W	HHY1	P39982	102 aa		4.64	□□□□□ -1.67
RFC1	YOR217W	YOR316C-A	Q3E806	69 aa		4.54	□□□□□ -1.68
RFC1	YOR217W	YBR072C-A	Q3E794	53 aa		4.52	□□□□□ -1.69
RFC1	YOR217W	CUP1-1	P0CX80	61 aa		4.49	□□□□□ -1.69
RFC1	YOR217W	CUP1-2	P0CX81	61 aa		4.49	□□□□□ -1.69
RFC1	YOR217W	TEL1	P38110	2787 aa		4.43	□□□□□ -1.7
RFC1	YOR217W	YLL066W-B	Q8TGJ7	56 aa		4.4	□□□□□ -1.7
RFC1	YOR217W	YOL164W-A	Q3E7A5	60 aa		4.37	□□□□□ -1.71
RFC1	YOR217W	TOR1	P35169	2470 aa		4.29	□□□□□ -1.72
RFC1	YOR217W	YHR073W-A	P0C5N7	58 aa		4.28	□□□□□ -1.72
RFC1	YOR217W	RPL37A	P49166	88 aa	Known RBP	4.26	□□□□□ -1.73
RFC1	YOR217W	UTP20	P35194	2493 aa	Known RBP	4.23	□□□□□ -1.73
RFC1	YOR217W	DYN1	P36022	4092 aa		4.2	□□□□□ -1.74
RFC1	YOR217W	YDR034C-A	P0C289	58 aa		4.2	□□□□□ -1.74
RFC1	YOR217W	YOR072W-B	Q3E832	53 aa		4.13	□□□□□ -1.75
RFC1	YOR217W	YLR157W-E	P0CF00	54 aa		4	□□□□□ -1.77
RFC1	YOR217W	NUM1	Q00402	2748 aa		3.98	□□□□□ -1.77
RFC1	YOR217W	Q0017	Q9ZZX8	53 aa		3.57	□□□□□ -1.84
RFC1	YOR217W	YML054C-A	Q3E809	52 aa		3.47	□□□□□ -1.85
RFC1	YOR217W	MDN1	Q12019	4910 aa	Known RBP	3.4	□□□□□ -1.87
RFC1	YOR217W	RPS29B	P41058	56 aa	Known RBP	3.05	□□□□□ -1.92
RFC1	YOR217W	YHR050W-A	Q05451	56 aa		3.05	□□□□□ -1.92
RFC1	YOR217W	RPS29A	P41057	56 aa	Known RBP	2.98	□□□□□ -1.93

Retrieved 63 of 5,963 RNA–protein pairs in 35 ms