RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeastyeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSB3YNL293W YLR255CO13574 117 aa4.57□□□□□ -1.68
MSB3YNL293W YOR394C-AQ8TGJ0 55 aa4.56□□□□□ -1.68
MSB3YNL293W YGR146C-AQ8TGT9 53 aa4.56□□□□□ -1.68
MSB3YNL293W GIS2P53849 153 aaKnown RBP RIP-Chip data4.56□□□□□ -1.68 RIP-Chip
MSB3YNL293W RPL43AP0CX25 92 aaKnown RBP4.54□□□□□ -1.68
MSB3YNL293W RPL43BP0CX26 92 aa4.54□□□□□ -1.68
MSB3YNL293W YJR085CP47131 105 aaKnown RBP4.51□□□□□ -1.69
MSB3YNL293W RPL33AP05744 107 aaKnown RBP4.5□□□□□ -1.69
MSB3YNL293W RPL33BP41056 107 aaKnown RBP4.5□□□□□ -1.69
MSB3YNL293W YMR230W-AQ3E7B5 62 aa4.5□□□□□ -1.69
MSB3YNL293W RPL37BP51402 88 aaKnown RBP4.47□□□□□ -1.69
MSB3YNL293W COX7P10174 60 aa4.46□□□□□ -1.7
MSB3YNL293W VPS13Q07878 3144 aa4.45□□□□□ -1.7
MSB3YNL293W YCR108CQ3E819 63 aa4.44□□□□□ -1.7
MSB3YNL293W IRA2P19158 3079 aa4.44□□□□□ -1.7
MSB3YNL293W OLI1P61829 76 aa4.4□□□□□ -1.7
MSB3YNL293W HFA1P32874 2273 aa4.39□□□□□ -1.71
MSB3YNL293W YBL044WP38194 122 aa4.39□□□□□ -1.71
MSB3YNL293W YAL067W-AQ8TGK6 75 aa4.37□□□□□ -1.71
MSB3YNL293W YHR073W-AP0C5N7 58 aa4.36□□□□□ -1.71
MSB3YNL293W YOR316C-AQ3E806 69 aa4.36□□□□□ -1.71
MSB3YNL293W YLL066W-BQ8TGJ7 56 aa4.32□□□□□ -1.72
MSB3YNL293W YBR016WP38216 128 aa4.31□□□□□ -1.72
MSB3YNL293W LCL1Q02786 101 aa4.29□□□□□ -1.72
MSB3YNL293W YJL144WP47009 104 aa4.28□□□□□ -1.72
MSB3YNL293W YFL067WP43537 175 aa4.27□□□□□ -1.73
MSB3YNL293W YHR212W-AP0CX91 67 aa4.26□□□□□ -1.73
MSB3YNL293W GCN1P33892 2672 aaKnown RBP4.15□□□□□ -1.74
MSB3YNL293W YJL009WP47078 108 aa4.14□□□□□ -1.75
MSB3YNL293W CSF1Q12150 2958 aa4.14□□□□□ -1.75
MSB3YNL293W YBR072C-AQ3E794 53 aa4.1□□□□□ -1.75
MSB3YNL293W TAO3P40468 2376 aa4.1□□□□□ -1.75
MSB3YNL293W IRA1P18963 3092 aa4.08□□□□□ -1.76
MSB3YNL293W PRP8P33334 2413 aaKnown RBP4.05□□□□□ -1.76
MSB3YNL293W YDR034C-AP0C289 58 aa4.03□□□□□ -1.76
MSB3YNL293W HHY1P39982 102 aa4.03□□□□□ -1.76
MSB3YNL293W RPL37AP49166 88 aaKnown RBP4.03□□□□□ -1.76
MSB3YNL293W YGL260WP53056 76 aa4.01□□□□□ -1.77
MSB3YNL293W MEC1P38111 2368 aa3.99□□□□□ -1.77
MSB3YNL293W Q0297Q9ZZV8 51 aa3.97□□□□□ -1.77
MSB3YNL293W TRA1P38811 3744 aa3.97□□□□□ -1.77
MSB3YNL293W YOR072W-BQ3E832 53 aa3.95□□□□□ -1.78
MSB3YNL293W FMP27Q06179 2628 aa3.94□□□□□ -1.78
MSB3YNL293W UTP20P35194 2493 aaKnown RBP3.9□□□□□ -1.79
MSB3YNL293W YDR034W-BQ6Q5X2 51 aa3.85□□□□□ -1.79
MSB3YNL293W YPR117WQ06116 2489 aa3.76□□□□□ -1.81
MSB3YNL293W YBR056W-AI2HB52 66 aa3.65□□□□□ -1.83
MSB3YNL293W TEL1P38110 2787 aa3.6□□□□□ -1.83
MSB3YNL293W YOL164W-AQ3E7A5 60 aa3.59□□□□□ -1.83
MSB3YNL293W TOR2P32600 2474 aaKnown RBP3.56□□□□□ -1.84
MSB3YNL293W YML054C-AQ3E809 52 aa3.53□□□□□ -1.84
MSB3YNL293W YHR086W-AQ3E746 53 aa3.49□□□□□ -1.85
MSB3YNL293W NUM1Q00402 2748 aa3.42□□□□□ -1.86
MSB3YNL293W Q0017Q9ZZX8 53 aa3.32□□□□□ -1.88
MSB3YNL293W TOR1P35169 2470 aa3.29□□□□□ -1.88
MSB3YNL293W YLR157W-EP0CF00 54 aa3.17□□□□□ -1.9
MSB3YNL293W DYN1P36022 4092 aa3.17□□□□□ -1.9
MSB3YNL293W YHR050W-AQ05451 56 aa3.05□□□□□ -1.92
MSB3YNL293W RPS29AP41057 56 aaKnown RBP2.92□□□□□ -1.94
MSB3YNL293W CUP1-1P0CX80 61 aa2.83□□□□□ -1.96
MSB3YNL293W CUP1-2P0CX81 61 aa2.83□□□□□ -1.96
MSB3YNL293W RPS29BP41058 56 aaKnown RBP2.7□□□□□ -1.98
MSB3YNL293W MDN1Q12019 4910 aaKnown RBP2.42□□□□□ -2.02
Retrieved 63 of 5,963 RNA–protein pairs in 88 ms