RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W YBL044WP38194 122 aa0.47□□□□□ -2.33
CTK3YML112W YOL164W-AQ3E7A5 60 aa0.46□□□□□ -2.34
CTK3YML112W YCR108CQ3E819 63 aa0.46□□□□□ -2.34
CTK3YML112W YFR009W-AP0C5M9 85 aa0.45□□□□□ -2.34
CTK3YML112W YGR025WP53216 100 aa0.45□□□□□ -2.34
CTK3YML112W TOS6P48560 102 aa0.43□□□□□ -2.34
CTK3YML112W OLI1P61829 76 aa0.42□□□□□ -2.34
CTK3YML112W YBR230W-AQ3E762 66 aa0.42□□□□□ -2.34
CTK3YML112W COA2Q3E823 68 aa0.42□□□□□ -2.34
CTK3YML112W YGR146C-AQ8TGT9 53 aa0.41□□□□□ -2.34
CTK3YML112W SIP18P50263 79 aa0.37□□□□□ -2.35
CTK3YML112W YLR342W-AQ3E810 57 aa0.37□□□□□ -2.35
CTK3YML112W SEN1Q00416 2231 aaKnown RBP0.37□□□□□ -2.35
CTK3YML112W YJL133C-AQ3E7A3 74 aa0.36□□□□□ -2.35
CTK3YML112W RPS29BP41058 56 aaKnown RBP0.35□□□□□ -2.35
CTK3YML112W TOM7P53507 60 aa0.35□□□□□ -2.35
CTK3YML112W YOR008C-AQ3E7B9 74 aa0.33□□□□□ -2.36
CTK3YML112W YLL006W-AQ3E814 58 aa0.33□□□□□ -2.36
CTK3YML112W FLO1P32768 1537 aa0.33□□□□□ -2.36
CTK3YML112W COX9P07255 59 aa0.32□□□□□ -2.36
CTK3YML112W DDR2P89113 61 aa0.32□□□□□ -2.36
CTK3YML112W YOR316C-AQ3E806 69 aa0.31□□□□□ -2.36
CTK3YML112W RPL29P05747 59 aaPredicted RBP0.29□□□□□ -2.36
CTK3YML112W TAO3P40468 2376 aa0.28□□□□□ -2.36
CTK3YML112W YDR524C-BQ3E6R4 66 aa0.28□□□□□ -2.36
CTK3YML112W YOR072W-BQ3E832 53 aa0.28□□□□□ -2.36
CTK3YML112W YJL127C-BQ3E828 52 aa0.27□□□□□ -2.37
CTK3YML112W RPS29AP41057 56 aaKnown RBP0.26□□□□□ -2.37
CTK3YML112W DYN1P36022 4092 aa0.26□□□□□ -2.37
CTK3YML112W YDR034C-AP0C289 58 aa0.25□□□□□ -2.37
CTK3YML112W YHR073W-AP0C5N7 58 aa0.25□□□□□ -2.37
CTK3YML112W YGL258W-AQ3E740 77 aa0.25□□□□□ -2.37
CTK3YML112W TRA1P38811 3744 aa0.23□□□□□ -2.37
CTK3YML112W CSF1Q12150 2958 aa0.19□□□□□ -2.38
CTK3YML112W HOR7Q05827 59 aa0.17□□□□□ -2.38
CTK3YML112W UTP20P35194 2493 aaKnown RBP0.16□□□□□ -2.38
CTK3YML112W YBR056W-AI2HB52 66 aa0.16□□□□□ -2.38
CTK3YML112W PMP3P87284 55 aa0.16□□□□□ -2.38
CTK3YML112W NCE101Q02820 53 aa0.16□□□□□ -2.38
CTK3YML112W YHR050W-AQ05451 56 aa0.16□□□□□ -2.38
CTK3YML112W TOR1P35169 2470 aa0.15□□□□□ -2.39
CTK3YML112W IRA1P18963 3092 aa0.15□□□□□ -2.39
CTK3YML112W Q0017Q9ZZX8 53 aa0.13□□□□□ -2.39
CTK3YML112W TOR2P32600 2474 aaKnown RBP0.13□□□□□ -2.39
CTK3YML112W GCN1P33892 2672 aaKnown RBP0.12□□□□□ -2.39
CTK3YML112W FMP27Q06179 2628 aa0.11□□□□□ -2.39
CTK3YML112W IRA2P19158 3079 aa0.1□□□□□ -2.39
CTK3YML112W MEC1P38111 2368 aa0.1□□□□□ -2.39
CTK3YML112W TEL1P38110 2787 aa0.1□□□□□ -2.39
CTK3YML112W MDN1Q12019 4910 aaKnown RBP0.1□□□□□ -2.39
CTK3YML112W YML054C-AQ3E809 52 aa0.1□□□□□ -2.39
CTK3YML112W YLL066W-BQ8TGJ7 56 aa0.1□□□□□ -2.39
CTK3YML112W VPS13Q07878 3144 aa0.09□□□□□ -2.39
CTK3YML112W YMR105W-AQ8TGS8 64 aa0.09□□□□□ -2.4
CTK3YML112W YPR117WQ06116 2489 aa0.07□□□□□ -2.4
CTK3YML112W NUM1Q00402 2748 aa0.06□□□□□ -2.4
CTK3YML112W RPL39P04650 51 aa0.04□□□□□ -2.4
CTK3YML112W CUP1-1P0CX80 61 aa0.01□□□□□ -2.41
CTK3YML112W CUP1-2P0CX81 61 aa0.01□□□□□ -2.41
CTK3YML112W YIL046W-AQ3E7Z4 54 aa-0.02□□□□□ -2.41
CTK3YML112W TOM1Q03280 3268 aa-0.04□□□□□ -2.42
CTK3YML112W Q0297Q9ZZV8 51 aa-0.21□□□□□ -2.44
CTK3YML112W YDR034W-BQ6Q5X2 51 aa-0.46□□□□□ -2.48
Retrieved 63 of 5,963 RNA–protein pairs in 23 ms