RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W DNF2Q12675 1612 aa0.3□□□□□ -2.36
SEC22YLR268W URB1P34241 1764 aaKnown RBP0.29□□□□□ -2.36
SEC22YLR268W YBL039W-BP0C268 59 aa0.29□□□□□ -2.36
SEC22YLR268W OLI1P61829 76 aa0.29□□□□□ -2.36
SEC22YLR268W YOR192C-CQ3E736 78 aa0.29□□□□□ -2.36
SEC22YLR268W YBR200W-AQ3E755 54 aa0.29□□□□□ -2.36
SEC22YLR268W YPR108W-AQ3E7B3 70 aa0.29□□□□□ -2.36
SEC22YLR268W Q0032Q9ZZX7 96 aa0.29□□□□□ -2.36
SEC22YLR268W GCN2P15442 1659 aa0.29□□□□□ -2.36
SEC22YLR268W NUP192P47054 1683 aa0.29□□□□□ -2.36
SEC22YLR268W STT4P37297 1900 aa0.28□□□□□ -2.36
SEC22YLR268W TRA1P38811 3744 aa0.28□□□□□ -2.36
SEC22YLR268W DNF3Q12674 1656 aa0.28□□□□□ -2.36
SEC22YLR268W YRF1-1P0CX20 1796 aa0.28□□□□□ -2.36
SEC22YLR268W YRF1-5P0CX21 1796 aa0.28□□□□□ -2.36
SEC22YLR268W YRF1-8P0CX22 1796 aa0.28□□□□□ -2.36
SEC22YLR268W YPR010C-AA5Z2X5 72 aa0.28□□□□□ -2.36
SEC22YLR268W YFR009W-AP0C5M9 85 aa0.28□□□□□ -2.36
SEC22YLR268W YOR008C-AQ3E7B9 74 aa0.28□□□□□ -2.36
SEC22YLR268W COA2Q3E823 68 aa0.28□□□□□ -2.36
SEC22YLR268W YOR394C-AQ8TGJ0 55 aa0.28□□□□□ -2.36
SEC22YLR268W CSF1Q12150 2958 aa0.28□□□□□ -2.36
SEC22YLR268W RPL29P05747 59 aaPredicted RBP0.27□□□□□ -2.37
SEC22YLR268W RPS27AP35997 82 aaKnown RBP0.27□□□□□ -2.37
SEC22YLR268W SIP18P50263 79 aa0.27□□□□□ -2.37
SEC22YLR268W DDR2P89113 61 aa0.27□□□□□ -2.37
SEC22YLR268W YGL258W-AQ3E740 77 aa0.27□□□□□ -2.37
SEC22YLR268W YLR342W-AQ3E810 57 aa0.27□□□□□ -2.37
SEC22YLR268W FIG2P25653 1609 aa0.27□□□□□ -2.37
SEC22YLR268W POL2P21951 2222 aaKnown RBP0.26□□□□□ -2.37
SEC22YLR268W RPS27BP38711 82 aa0.26□□□□□ -2.37
SEC22YLR268W RPC10P40422 70 aa0.26□□□□□ -2.37
SEC22YLR268W YDR524C-BQ3E6R4 66 aa0.26□□□□□ -2.37
SEC22YLR268W YGR146C-AQ8TGT9 53 aa0.26□□□□□ -2.37
SEC22YLR268W SEN1Q00416 2231 aaKnown RBP0.26□□□□□ -2.37
SEC22YLR268W YBL044WP38194 122 aa0.25□□□□□ -2.37
SEC22YLR268W YBR016WP38216 128 aa0.25□□□□□ -2.37
SEC22YLR268W TOM7P53507 60 aa0.25□□□□□ -2.37
SEC22YLR268W YJL133C-AQ3E7A3 74 aa0.25□□□□□ -2.37
SEC22YLR268W YOR316C-AQ3E806 69 aa0.25□□□□□ -2.37
SEC22YLR268W YLL006W-AQ3E814 58 aa0.25□□□□□ -2.37
SEC22YLR268W YCR108CQ3E819 63 aa0.25□□□□□ -2.37
SEC22YLR268W HKR1P41809 1802 aa0.24□□□□□ -2.37
SEC22YLR268W FLO1P32768 1537 aa0.24□□□□□ -2.37
SEC22YLR268W HOR7Q05827 59 aa0.24□□□□□ -2.37
SEC22YLR268W YJL127C-BQ3E828 52 aa0.24□□□□□ -2.37
SEC22YLR268W YHR073W-AP0C5N7 58 aa0.23□□□□□ -2.37
SEC22YLR268W PMP3P87284 55 aa0.23□□□□□ -2.37
SEC22YLR268W NCE101Q02820 53 aa0.23□□□□□ -2.37
SEC22YLR268W YOL164W-AQ3E7A5 60 aa0.23□□□□□ -2.37
SEC22YLR268W YOR072W-BQ3E832 53 aa0.23□□□□□ -2.37
SEC22YLR268W MEC1P38111 2368 aa0.23□□□□□ -2.37
SEC22YLR268W YDR034C-AP0C289 58 aa0.21□□□□□ -2.38
SEC22YLR268W RPS29AP41057 56 aaKnown RBP0.21□□□□□ -2.38
SEC22YLR268W YDR034W-BQ6Q5X2 51 aa0.21□□□□□ -2.38
SEC22YLR268W YML054C-AQ3E809 52 aa0.2□□□□□ -2.38
SEC22YLR268W YMR105W-AQ8TGS8 64 aa0.19□□□□□ -2.38
SEC22YLR268W Q0017Q9ZZX8 53 aa0.19□□□□□ -2.38
SEC22YLR268W YHR050W-AQ05451 56 aa0.18□□□□□ -2.38
SEC22YLR268W YLL066W-BQ8TGJ7 56 aa0.17□□□□□ -2.38
SEC22YLR268W RPL39P04650 51 aa0.16□□□□□ -2.38
SEC22YLR268W YIL046W-AQ3E7Z4 54 aa0.15□□□□□ -2.39
SEC22YLR268W Q0297Q9ZZV8 51 aa0.1□□□□□ -2.39
Retrieved 63 of 5,963 RNA–protein pairs in 26.9 ms