RNA–Protein interactions for RNA: YKR017C

HEL1, Transcript of RING finger ubiquitin ligase (E3), yeastyeast

Gene HEL1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HEL1YKR017C RPL43BP0CX26 92 aa4.26□□□□□ -1.73
HEL1YKR017C PMP3P87284 55 aa4.26□□□□□ -1.73
HEL1YKR017C OLI1P61829 76 aa4.25□□□□□ -1.73
HEL1YKR017C RPS27AP35997 82 aaKnown RBP4.22□□□□□ -1.73
HEL1YKR017C URA2P07259 2214 aaKnown RBP4.18□□□□□ -1.74
HEL1YKR017C RPS27BP38711 82 aa4.16□□□□□ -1.74
HEL1YKR017C YCR108CQ3E819 63 aa4.16□□□□□ -1.74
HEL1YKR017C YGR146C-AQ8TGT9 53 aa4.16□□□□□ -1.74
HEL1YKR017C POL2P21951 2222 aaKnown RBP4.16□□□□□ -1.74
HEL1YKR017C YBL044WP38194 122 aa4.14□□□□□ -1.75
HEL1YKR017C RPC10P40422 70 aa4.12□□□□□ -1.75
HEL1YKR017C RPL37BP51402 88 aaKnown RBP4.11□□□□□ -1.75
HEL1YKR017C YNL146C-AQ3E7Z1 64 aa4.1□□□□□ -1.75
HEL1YKR017C YMR105W-AQ8TGS8 64 aa4.09□□□□□ -1.76
HEL1YKR017C HOR7Q05827 59 aa4.07□□□□□ -1.76
HEL1YKR017C YBR016WP38216 128 aa4□□□□□ -1.77
HEL1YKR017C RPL39P04650 51 aa3.99□□□□□ -1.77
HEL1YKR017C YOR316C-AQ3E806 69 aa3.97□□□□□ -1.77
HEL1YKR017C YMR230W-AQ3E7B5 62 aa3.95□□□□□ -1.78
HEL1YKR017C YBR072C-AQ3E794 53 aa3.94□□□□□ -1.78
HEL1YKR017C HHY1P39982 102 aa3.9□□□□□ -1.78
HEL1YKR017C YHR073W-AP0C5N7 58 aa3.88□□□□□ -1.79
HEL1YKR017C YHR212W-AP0CX91 67 aa3.85□□□□□ -1.79
HEL1YKR017C YGL260WP53056 76 aa3.85□□□□□ -1.79
HEL1YKR017C YIL046W-AQ3E7Z4 54 aa3.81□□□□□ -1.8
HEL1YKR017C YHR086W-AQ3E746 53 aa3.8□□□□□ -1.8
HEL1YKR017C YDR524C-BQ3E6R4 66 aa3.78□□□□□ -1.81
HEL1YKR017C HFA1P32874 2273 aa3.75□□□□□ -1.81
HEL1YKR017C TOM1Q03280 3268 aa3.74□□□□□ -1.81
HEL1YKR017C RPL37AP49166 88 aaKnown RBP3.71□□□□□ -1.82
HEL1YKR017C YOR072W-BQ3E832 53 aa3.68□□□□□ -1.82
HEL1YKR017C YDR034C-AP0C289 58 aa3.65□□□□□ -1.82
HEL1YKR017C VPS13Q07878 3144 aa3.58□□□□□ -1.84
HEL1YKR017C IRA2P19158 3079 aa3.58□□□□□ -1.84
HEL1YKR017C YLL066W-BQ8TGJ7 56 aa3.55□□□□□ -1.84
HEL1YKR017C YOL164W-AQ3E7A5 60 aa3.54□□□□□ -1.84
HEL1YKR017C TAO3P40468 2376 aa3.51□□□□□ -1.85
HEL1YKR017C MEC1P38111 2368 aa3.48□□□□□ -1.85
HEL1YKR017C CSF1Q12150 2958 aa3.4□□□□□ -1.86
HEL1YKR017C TRA1P38811 3744 aa3.34□□□□□ -1.87
HEL1YKR017C PRP8P33334 2413 aaKnown RBP3.29□□□□□ -1.88
HEL1YKR017C YLR157W-EP0CF00 54 aa3.29□□□□□ -1.88
HEL1YKR017C IRA1P18963 3092 aa3.28□□□□□ -1.88
HEL1YKR017C GCN1P33892 2672 aaKnown RBP3.2□□□□□ -1.9
HEL1YKR017C FMP27Q06179 2628 aa3.17□□□□□ -1.9
HEL1YKR017C YDR034W-BQ6Q5X2 51 aa3.16□□□□□ -1.9
HEL1YKR017C YML054C-AQ3E809 52 aa3.1□□□□□ -1.91
HEL1YKR017C YPR117WQ06116 2489 aa3.05□□□□□ -1.92
HEL1YKR017C Q0297Q9ZZV8 51 aa3.04□□□□□ -1.92
HEL1YKR017C UTP20P35194 2493 aaKnown RBP3.02□□□□□ -1.93
HEL1YKR017C Q0017Q9ZZX8 53 aa2.95□□□□□ -1.94
HEL1YKR017C YBR056W-AI2HB52 66 aa2.93□□□□□ -1.94
HEL1YKR017C TOR2P32600 2474 aaKnown RBP2.85□□□□□ -1.95
HEL1YKR017C TEL1P38110 2787 aa2.83□□□□□ -1.96
HEL1YKR017C RPS29AP41057 56 aaKnown RBP2.82□□□□□ -1.96
HEL1YKR017C YHR050W-AQ05451 56 aa2.82□□□□□ -1.96
HEL1YKR017C RPS29BP41058 56 aaKnown RBP2.78□□□□□ -1.96
HEL1YKR017C NUM1Q00402 2748 aa2.76□□□□□ -1.97
HEL1YKR017C DYN1P36022 4092 aa2.62□□□□□ -1.99
HEL1YKR017C TOR1P35169 2470 aa2.57□□□□□ -2
HEL1YKR017C CUP1-1P0CX80 61 aa2.17□□□□□ -2.06
HEL1YKR017C CUP1-2P0CX81 61 aa2.17□□□□□ -2.06
HEL1YKR017C MDN1Q12019 4910 aaKnown RBP2.03□□□□□ -2.08
Retrieved 63 of 5,963 RNA–protein pairs in 10.7 ms