RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeastyeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT23YKL020C URA2P07259 2214 aaKnown RBP2.56□□□□□ -2
SPT23YKL020C YBR201C-AQ2V2Q3 67 aa2.55□□□□□ -2
SPT23YKL020C YGL041C-BQ3E750 60 aa2.55□□□□□ -2
SPT23YKL020C YAL067W-AQ8TGK6 75 aa2.55□□□□□ -2
SPT23YKL020C YLR122CQ12312 125 aa2.54□□□□□ -2
SPT23YKL020C IRA1P18963 3092 aa2.54□□□□□ -2
SPT23YKL020C YCL042WP25572 119 aa2.53□□□□□ -2
SPT23YKL020C YLR255CO13574 117 aa2.53□□□□□ -2.01
SPT23YKL020C YGR240C-AQ3E786 66 aa2.53□□□□□ -2.01
SPT23YKL020C RPL33AP05744 107 aaKnown RBP2.52□□□□□ -2.01
SPT23YKL020C HFA1P32874 2273 aa2.52□□□□□ -2.01
SPT23YKL020C YHR007C-AQ07074 71 aa2.52□□□□□ -2.01
SPT23YKL020C PRP8P33334 2413 aaKnown RBP2.52□□□□□ -2.01
SPT23YKL020C YOR072WQ08486 104 aa2.51□□□□□ -2.01
SPT23YKL020C CSF1Q12150 2958 aa2.5□□□□□ -2.01
SPT23YKL020C GIS2P53849 153 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
SPT23YKL020C TRA1P38811 3744 aa2.49□□□□□ -2.01
SPT23YKL020C YJR128WP47162 119 aa2.46□□□□□ -2.02
SPT23YKL020C UTP20P35194 2493 aaKnown RBP2.46□□□□□ -2.02
SPT23YKL020C YJL144WP47009 104 aa2.45□□□□□ -2.02
SPT23YKL020C YOR394C-AQ8TGJ0 55 aa2.45□□□□□ -2.02
SPT23YKL020C YGR146C-AQ8TGT9 53 aa2.45□□□□□ -2.02
SPT23YKL020C YMR230W-AQ3E7B5 62 aa2.45□□□□□ -2.02
SPT23YKL020C COX7P10174 60 aa2.44□□□□□ -2.02
SPT23YKL020C TOR1P35169 2470 aa2.42□□□□□ -2.02
SPT23YKL020C RPL43AP0CX25 92 aaKnown RBP2.41□□□□□ -2.02
SPT23YKL020C RPL43BP0CX26 92 aa2.41□□□□□ -2.02
SPT23YKL020C YLL066W-BQ8TGJ7 56 aa2.41□□□□□ -2.02
SPT23YKL020C RPL37BP51402 88 aaKnown RBP2.4□□□□□ -2.02
SPT23YKL020C YHR073W-AP0C5N7 58 aa2.38□□□□□ -2.03
SPT23YKL020C MEC1P38111 2368 aa2.38□□□□□ -2.03
SPT23YKL020C LCL1Q02786 101 aa2.38□□□□□ -2.03
SPT23YKL020C YHR212W-AP0CX91 67 aa2.36□□□□□ -2.03
SPT23YKL020C YOR316C-AQ3E806 69 aa2.36□□□□□ -2.03
SPT23YKL020C YCR108CQ3E819 63 aa2.36□□□□□ -2.03
SPT23YKL020C GCN1P33892 2672 aaKnown RBP2.34□□□□□ -2.03
SPT23YKL020C YBR016WP38216 128 aa2.34□□□□□ -2.03
SPT23YKL020C OLI1P61829 76 aa2.34□□□□□ -2.04
SPT23YKL020C YJL009WP47078 108 aa2.33□□□□□ -2.04
SPT23YKL020C YDR034W-BQ6Q5X2 51 aa2.33□□□□□ -2.04
SPT23YKL020C YBL044WP38194 122 aa2.3□□□□□ -2.04
SPT23YKL020C TEL1P38110 2787 aa2.29□□□□□ -2.04
SPT23YKL020C YGL260WP53056 76 aa2.29□□□□□ -2.04
SPT23YKL020C Q0297Q9ZZV8 51 aa2.28□□□□□ -2.04
SPT23YKL020C NUM1Q00402 2748 aa2.24□□□□□ -2.05
SPT23YKL020C YBR072C-AQ3E794 53 aa2.19□□□□□ -2.06
SPT23YKL020C YDR034C-AP0C289 58 aa2.17□□□□□ -2.06
SPT23YKL020C RPL37AP49166 88 aaKnown RBP2.17□□□□□ -2.06
SPT23YKL020C YBR056W-AI2HB52 66 aa2.16□□□□□ -2.06
SPT23YKL020C HHY1P39982 102 aa2.13□□□□□ -2.07
SPT23YKL020C YOR072W-BQ3E832 53 aa2.08□□□□□ -2.08
SPT23YKL020C DYN1P36022 4092 aa2.06□□□□□ -2.08
SPT23YKL020C YHR086W-AQ3E746 53 aa2.04□□□□□ -2.08
SPT23YKL020C YOL164W-AQ3E7A5 60 aa1.93□□□□□ -2.1
SPT23YKL020C YML054C-AQ3E809 52 aa1.89□□□□□ -2.11
SPT23YKL020C CUP1-1P0CX80 61 aa1.87□□□□□ -2.11
SPT23YKL020C CUP1-2P0CX81 61 aa1.87□□□□□ -2.11
SPT23YKL020C Q0017Q9ZZX8 53 aa1.82□□□□□ -2.12
SPT23YKL020C YLR157W-EP0CF00 54 aa1.76□□□□□ -2.13
SPT23YKL020C YHR050W-AQ05451 56 aa1.61□□□□□ -2.15
SPT23YKL020C RPS29AP41057 56 aaKnown RBP1.57□□□□□ -2.16
SPT23YKL020C MDN1Q12019 4910 aaKnown RBP1.5□□□□□ -2.17
SPT23YKL020C RPS29BP41058 56 aaKnown RBP1.5□□□□□ -2.17
Retrieved 63 of 5,963 RNA–protein pairs in 10.4 ms