RNA–Protein interactions for RNA: YJR140C

HIR3, Transcript of Subunit of the HIR complex, yeastyeast

Gene HIR3, Length 4,947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIR3YJR140C TIM12P32830 109 aa0.4□□□□□ -2.35
HIR3YJR140C MDN1Q12019 4910 aaKnown RBP0.4□□□□□ -2.35
HIR3YJR140C PMD1P32634 1753 aa0.4□□□□□ -2.35
HIR3YJR140C YBR200W-AQ3E755 54 aa0.4□□□□□ -2.35
HIR3YJR140C FKS3Q04952 1785 aa0.39□□□□□ -2.35
HIR3YJR140C STT4P37297 1900 aa0.39□□□□□ -2.35
HIR3YJR140C YSY6P38374 65 aa0.39□□□□□ -2.35
HIR3YJR140C YDR524C-BQ3E6R4 66 aa0.39□□□□□ -2.35
HIR3YJR140C PRP8P33334 2413 aaKnown RBP0.38□□□□□ -2.35
HIR3YJR140C PMP3P87284 55 aa0.37□□□□□ -2.35
HIR3YJR140C YBR230W-AQ3E762 66 aa0.37□□□□□ -2.35
HIR3YJR140C YIL102C-AQ2V2P5 75 aa0.35□□□□□ -2.35
HIR3YJR140C COX9P07255 59 aa0.35□□□□□ -2.35
HIR3YJR140C YFR010W-AP0C5N0 62 aa0.35□□□□□ -2.35
HIR3YJR140C HOR7Q05827 59 aa0.34□□□□□ -2.35
HIR3YJR140C CSF1Q12150 2958 aa0.34□□□□□ -2.36
HIR3YJR140C YOL131WQ08270 108 aa0.34□□□□□ -2.36
HIR3YJR140C RPS27AP35997 82 aaKnown RBP0.33□□□□□ -2.36
HIR3YJR140C YIL046W-AQ3E7Z4 54 aa0.33□□□□□ -2.36
HIR3YJR140C TOS6P48560 102 aa0.33□□□□□ -2.36
HIR3YJR140C Q0297Q9ZZV8 51 aa0.33□□□□□ -2.36
HIR3YJR140C RPS30AP0CX33 63 aaKnown RBP0.32□□□□□ -2.36
HIR3YJR140C RPS30BP0CX34 63 aaKnown RBP0.32□□□□□ -2.36
HIR3YJR140C VPS13Q07878 3144 aa0.32□□□□□ -2.36
HIR3YJR140C YLR157W-DP0CE99 70 aa0.3□□□□□ -2.36
HIR3YJR140C YHR050W-AQ05451 56 aa0.3□□□□□ -2.36
HIR3YJR140C YOR072W-BQ3E832 53 aa0.3□□□□□ -2.36
HIR3YJR140C VMA9Q3E7B6 73 aa0.29□□□□□ -2.36
HIR3YJR140C TOM1Q03280 3268 aa0.29□□□□□ -2.36
HIR3YJR140C YGL258W-AQ3E740 77 aa0.28□□□□□ -2.36
HIR3YJR140C IRA1P18963 3092 aa0.27□□□□□ -2.37
HIR3YJR140C YDR034C-AP0C289 58 aa0.27□□□□□ -2.37
HIR3YJR140C YGR146C-AQ8TGT9 53 aa0.27□□□□□ -2.37
HIR3YJR140C YHR073W-AP0C5N7 58 aa0.26□□□□□ -2.37
HIR3YJR140C BPH1P25356 2167 aa0.26□□□□□ -2.37
HIR3YJR140C TAO3P40468 2376 aa0.25□□□□□ -2.37
HIR3YJR140C YDR034W-BQ6Q5X2 51 aa0.24□□□□□ -2.37
HIR3YJR140C IRA2P19158 3079 aa0.24□□□□□ -2.37
HIR3YJR140C YKL023C-AQ2V2P3 75 aa0.24□□□□□ -2.37
HIR3YJR140C YOL166W-AQ8TGJ1 51 aa0.24□□□□□ -2.37
HIR3YJR140C RPS27BP38711 82 aa0.22□□□□□ -2.37
HIR3YJR140C YLL006W-AQ3E814 58 aa0.22□□□□□ -2.37
HIR3YJR140C YLL066W-BQ8TGJ7 56 aa0.21□□□□□ -2.38
HIR3YJR140C SMX2P40204 77 aaKnown RBP0.21□□□□□ -2.38
HIR3YJR140C SEN1Q00416 2231 aaKnown RBP0.19□□□□□ -2.38
HIR3YJR140C TOM7P53507 60 aa0.18□□□□□ -2.38
HIR3YJR140C NCE101Q02820 53 aa0.17□□□□□ -2.38
HIR3YJR140C YLR342W-AQ3E810 57 aa0.17□□□□□ -2.38
HIR3YJR140C YJL133C-AQ3E7A3 74 aa0.16□□□□□ -2.38
HIR3YJR140C DDR2P89113 61 aa0.16□□□□□ -2.38
HIR3YJR140C RPL29P05747 59 aaPredicted RBP0.16□□□□□ -2.38
HIR3YJR140C TEL1P38110 2787 aa0.15□□□□□ -2.39
HIR3YJR140C YOR316C-AQ3E806 69 aa0.14□□□□□ -2.39
HIR3YJR140C YJL127C-BQ3E828 52 aa0.12□□□□□ -2.39
HIR3YJR140C RPL39P04650 51 aa0.08□□□□□ -2.4
HIR3YJR140C GCN1P33892 2672 aaKnown RBP0.08□□□□□ -2.4
HIR3YJR140C UTP20P35194 2493 aaKnown RBP0.01□□□□□ -2.41
HIR3YJR140C NUM1Q00402 2748 aa-0.01□□□□□ -2.41
HIR3YJR140C YPR117WQ06116 2489 aa-0.01□□□□□ -2.41
HIR3YJR140C TOR1P35169 2470 aa-0.03□□□□□ -2.41
HIR3YJR140C FMP27Q06179 2628 aa-0.06□□□□□ -2.42
HIR3YJR140C MEC1P38111 2368 aa-0.15□□□□□ -2.43
HIR3YJR140C TOR2P32600 2474 aaKnown RBP-0.16□□□□□ -2.43
Retrieved 63 of 5,963 RNA–protein pairs in 8.9 ms