RNA–Protein interactions for RNA: YJL173C

RFA3, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA3, Length 369 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA3YJL173C DNF1P32660 1571 aa-1.17□□□□□ -2.6
RFA3YJL173C VMR1P38735 1592 aa-1.17□□□□□ -2.6
RFA3YJL173C SNQ2P32568 1501 aaKnown RBP-1.2□□□□□ -2.6
RFA3YJL173C CUP1-1P0CX80 61 aa-1.2□□□□□ -2.6
RFA3YJL173C CUP1-2P0CX81 61 aa-1.2□□□□□ -2.6
RFA3YJL173C TCB3Q03640 1545 aaKnown RBP-1.24□□□□□ -2.61
RFA3YJL173C MYO4P32492 1471 aa-1.26□□□□□ -2.61
RFA3YJL173C TRA1P38811 3744 aa-1.26□□□□□ -2.61
RFA3YJL173C FIG2P25653 1609 aa-1.27□□□□□ -2.61
RFA3YJL173C TY1B-DR4Q07793 1604 aa-1.29□□□□□ -2.62
RFA3YJL173C YOR093CQ12275 1648 aa-1.29□□□□□ -2.62
RFA3YJL173C YOR192C-CQ3E736 78 aa-1.32□□□□□ -2.62
RFA3YJL173C Q0017Q9ZZX8 53 aa-1.32□□□□□ -2.62
RFA3YJL173C THO2P53552 1597 aaKnown RBP-1.34□□□□□ -2.62
RFA3YJL173C VPS13Q07878 3144 aa-1.34□□□□□ -2.62
RFA3YJL173C VMA9Q3E7B6 73 aa-1.38□□□□□ -2.63
RFA3YJL173C YOR316C-AQ3E806 69 aa-1.38□□□□□ -2.63
RFA3YJL173C YPR010C-AA5Z2X5 72 aa-1.39□□□□□ -2.63
RFA3YJL173C PDR5P33302 1511 aaKnown RBP-1.42□□□□□ -2.64
RFA3YJL173C TOM1Q03280 3268 aa-1.43□□□□□ -2.64
RFA3YJL173C YDR034C-AP0C289 58 aa-1.43□□□□□ -2.64
RFA3YJL173C YMR105W-AQ8TGS8 64 aa-1.43□□□□□ -2.64
RFA3YJL173C YML054C-AQ3E809 52 aa-1.44□□□□□ -2.64
RFA3YJL173C YCF1P39109 1515 aaKnown RBP-1.45□□□□□ -2.64
RFA3YJL173C RPL29P05747 59 aaPredicted RBP-1.46□□□□□ -2.64
RFA3YJL173C YKL023C-AQ2V2P3 75 aa-1.47□□□□□ -2.64
RFA3YJL173C FLO1P32768 1537 aa-1.5□□□□□ -2.65
RFA3YJL173C YBT1P32386 1661 aa-1.52□□□□□ -2.65
RFA3YJL173C YFR010W-AP0C5N0 62 aa-1.54□□□□□ -2.66
RFA3YJL173C SSK2P53599 1579 aa-1.63□□□□□ -2.67
RFA3YJL173C NUP188P52593 1655 aaKnown RBP-1.63□□□□□ -2.67
RFA3YJL173C ULS1Q08562 1619 aa-1.64□□□□□ -2.67
RFA3YJL173C YHR073W-AP0C5N7 58 aa-1.65□□□□□ -2.67
RFA3YJL173C BUD3P25558 1636 aa-1.66□□□□□ -2.67
RFA3YJL173C COX9P07255 59 aa-1.69□□□□□ -2.68
RFA3YJL173C DDR2P89113 61 aa-1.69□□□□□ -2.68
RFA3YJL173C ATG2P53855 1592 aa-1.69□□□□□ -2.68
RFA3YJL173C STU1P38198 1513 aa-1.71□□□□□ -2.68
RFA3YJL173C YJL133C-AQ3E7A3 74 aa-1.72□□□□□ -2.68
RFA3YJL173C CDC25P04821 1589 aa-1.72□□□□□ -2.69
RFA3YJL173C GCN2P15442 1659 aa-1.74□□□□□ -2.69
RFA3YJL173C NUP170P38181 1502 aa-1.76□□□□□ -2.69
RFA3YJL173C NUP192P47054 1683 aa-1.8□□□□□ -2.7
RFA3YJL173C YLR342W-AQ3E810 57 aa-1.81□□□□□ -2.7
RFA3YJL173C SPT6P23615 1451 aaKnown RBP-1.82□□□□□ -2.7
RFA3YJL173C PEP1P32319 1579 aa-1.83□□□□□ -2.7
RFA3YJL173C USO1P25386 1790 aa-1.85□□□□□ -2.71
RFA3YJL173C YLL066W-BQ8TGJ7 56 aa-1.87□□□□□ -2.71
RFA3YJL173C HIR3P47171 1648 aa-1.92□□□□□ -2.72
RFA3YJL173C RKR1Q04781 1562 aa-1.99□□□□□ -2.73
RFA3YJL173C YJL127C-BQ3E828 52 aa-2□□□□□ -2.73
RFA3YJL173C PMP3P87284 55 aa-2.01□□□□□ -2.73
RFA3YJL173C CHC1P22137 1653 aaKnown RBP-2.03□□□□□ -2.73
RFA3YJL173C TOM7P53507 60 aa-2.05□□□□□ -2.74
RFA3YJL173C MON2P48563 1636 aaPredicted RBP-2.06□□□□□ -2.74
RFA3YJL173C SMX2P40204 77 aaKnown RBP-2.08□□□□□ -2.74
RFA3YJL173C HOR7Q05827 59 aa-2.13□□□□□ -2.75
RFA3YJL173C MLP2P40457 1679 aa-2.15□□□□□ -2.75
RFA3YJL173C Q0297Q9ZZV8 51 aa-2.21□□□□□ -2.76
RFA3YJL173C RPL39P04650 51 aa-2.41□□□□□ -2.8
RFA3YJL173C YIL046W-AQ3E7Z4 54 aa-2.42□□□□□ -2.8
RFA3YJL173C NCE101Q02820 53 aa-2.43□□□□□ -2.8
RFA3YJL173C YDR034W-BQ6Q5X2 51 aa-2.53□□□□□ -2.81
Retrieved 63 of 5,963 RNA–protein pairs in 17 ms