RNA–Protein interactions for RNA: YHR031C

RRM3, Transcript of DNA helicase involved in rDNA replication and Ty1 transposition, yeastyeast

Gene RRM3, Length 2,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRM3YHR031C RPL33BP41056 107 aaKnown RBP1.98□□□□□ -2.09
RRM3YHR031C YIL046W-AQ3E7Z4 54 aa1.98□□□□□ -2.09
RRM3YHR031C RPL39P04650 51 aa1.97□□□□□ -2.09
RRM3YHR031C YCL042WP25572 119 aa1.96□□□□□ -2.1
RRM3YHR031C YIL086CP40503 102 aa1.96□□□□□ -2.1
RRM3YHR031C YLR255CO13574 117 aa1.95□□□□□ -2.1
RRM3YHR031C RPL33AP05744 107 aaKnown RBP1.95□□□□□ -2.1
RRM3YHR031C HOR7Q05827 59 aa1.95□□□□□ -2.1
RRM3YHR031C YOR072WQ08486 104 aa1.95□□□□□ -2.1
RRM3YHR031C PRP8P33334 2413 aaKnown RBP1.94□□□□□ -2.1
RRM3YHR031C RPC10P40422 70 aa1.93□□□□□ -2.1
RRM3YHR031C YGR240C-AQ3E786 66 aa1.93□□□□□ -2.1
RRM3YHR031C YOR394C-AQ8TGJ0 55 aa1.93□□□□□ -2.1
RRM3YHR031C YHR007C-AQ07074 71 aa1.92□□□□□ -2.1
RRM3YHR031C COX7P10174 60 aa1.91□□□□□ -2.1
RRM3YHR031C YGR146C-AQ8TGT9 53 aa1.91□□□□□ -2.1
RRM3YHR031C YPR117WQ06116 2489 aa1.91□□□□□ -2.1
RRM3YHR031C YMR230W-AQ3E7B5 62 aa1.91□□□□□ -2.1
RRM3YHR031C YJR128WP47162 119 aa1.89□□□□□ -2.11
RRM3YHR031C RDS3Q06835 107 aaPredicted RBP1.89□□□□□ -2.11
RRM3YHR031C RPL43AP0CX25 92 aaKnown RBP1.88□□□□□ -2.11
RRM3YHR031C RPL43BP0CX26 92 aa1.88□□□□□ -2.11
RRM3YHR031C UTP20P35194 2493 aaKnown RBP1.88□□□□□ -2.11
RRM3YHR031C RPL37BP51402 88 aaKnown RBP1.88□□□□□ -2.11
RRM3YHR031C OLI1P61829 76 aa1.88□□□□□ -2.11
RRM3YHR031C YJL144WP47009 104 aa1.87□□□□□ -2.11
RRM3YHR031C TAR1Q8TGM6 124 aa1.87□□□□□ -2.11
RRM3YHR031C GIS2P53849 153 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11not detected
RRM3YHR031C YCR108CQ3E819 63 aa1.86□□□□□ -2.11
RRM3YHR031C YGL260WP53056 76 aa1.85□□□□□ -2.11
RRM3YHR031C TEL1P38110 2787 aa1.85□□□□□ -2.11
RRM3YHR031C YBL044WP38194 122 aa1.84□□□□□ -2.11
RRM3YHR031C LCL1Q02786 101 aa1.84□□□□□ -2.11
RRM3YHR031C TOR2P32600 2474 aaKnown RBP1.84□□□□□ -2.12
RRM3YHR031C YDR034W-BQ6Q5X2 51 aa1.82□□□□□ -2.12
RRM3YHR031C YOR316C-AQ3E806 69 aa1.82□□□□□ -2.12
RRM3YHR031C NUM1Q00402 2748 aa1.81□□□□□ -2.12
RRM3YHR031C YHR073W-AP0C5N7 58 aa1.81□□□□□ -2.12
RRM3YHR031C YJL009WP47078 108 aa1.81□□□□□ -2.12
RRM3YHR031C MEC1P38111 2368 aa1.79□□□□□ -2.12
RRM3YHR031C YBR016WP38216 128 aa1.79□□□□□ -2.12
RRM3YHR031C YBR072C-AQ3E794 53 aa1.75□□□□□ -2.13
RRM3YHR031C YLL066W-BQ8TGJ7 56 aa1.74□□□□□ -2.13
RRM3YHR031C YBR056W-AI2HB52 66 aa1.74□□□□□ -2.13
RRM3YHR031C TOR1P35169 2470 aa1.72□□□□□ -2.13
RRM3YHR031C YHR212W-AP0CX91 67 aa1.7□□□□□ -2.14
RRM3YHR031C HHY1P39982 102 aa1.69□□□□□ -2.14
RRM3YHR031C RPL37AP49166 88 aaKnown RBP1.69□□□□□ -2.14
RRM3YHR031C YDR034C-AP0C289 58 aa1.68□□□□□ -2.14
RRM3YHR031C YOR072W-BQ3E832 53 aa1.66□□□□□ -2.14
RRM3YHR031C Q0297Q9ZZV8 51 aa1.64□□□□□ -2.15
RRM3YHR031C YHR086W-AQ3E746 53 aa1.57□□□□□ -2.16
RRM3YHR031C YOL164W-AQ3E7A5 60 aa1.52□□□□□ -2.17
RRM3YHR031C YML054C-AQ3E809 52 aa1.47□□□□□ -2.17
RRM3YHR031C DYN1P36022 4092 aa1.43□□□□□ -2.18
RRM3YHR031C Q0017Q9ZZX8 53 aa1.38□□□□□ -2.19
RRM3YHR031C YLR157W-EP0CF00 54 aa1.38□□□□□ -2.19
RRM3YHR031C CUP1-1P0CX80 61 aa1.3□□□□□ -2.2
RRM3YHR031C CUP1-2P0CX81 61 aa1.3□□□□□ -2.2
RRM3YHR031C YHR050W-AQ05451 56 aa1.29□□□□□ -2.2
RRM3YHR031C RPS29AP41057 56 aaKnown RBP1.26□□□□□ -2.21
RRM3YHR031C MDN1Q12019 4910 aaKnown RBP1.22□□□□□ -2.21
RRM3YHR031C RPS29BP41058 56 aaKnown RBP1.19□□□□□ -2.22
Retrieved 63 of 5,963 RNA–protein pairs in 25.4 ms