RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W YOR072W-BQ3E832 53 aa-0.39□□□□□ -2.47
SMD1YGR074W YHR050W-AQ05451 56 aa-0.4□□□□□ -2.47
SMD1YGR074W YOR093CQ12275 1648 aa-0.42□□□□□ -2.48
SMD1YGR074W SNQ2P32568 1501 aaKnown RBP-0.43□□□□□ -2.48
SMD1YGR074W VMA9Q3E7B6 73 aa-0.43□□□□□ -2.48
SMD1YGR074W IRA2P19158 3079 aa-0.44□□□□□ -2.48
SMD1YGR074W CUP1-1P0CX80 61 aa-0.44□□□□□ -2.48
SMD1YGR074W CUP1-2P0CX81 61 aa-0.44□□□□□ -2.48
SMD1YGR074W YCF1P39109 1515 aaKnown RBP-0.47□□□□□ -2.48
SMD1YGR074W YBT1P32386 1661 aa-0.47□□□□□ -2.48
SMD1YGR074W IRA1P18963 3092 aa-0.49□□□□□ -2.49
SMD1YGR074W YKL023C-AQ2V2P3 75 aa-0.5□□□□□ -2.49
SMD1YGR074W DYN1P36022 4092 aa-0.53□□□□□ -2.49
SMD1YGR074W FIG2P25653 1609 aa-0.53□□□□□ -2.49
SMD1YGR074W YOR192C-CQ3E736 78 aa-0.55□□□□□ -2.5
SMD1YGR074W VPS13Q07878 3144 aa-0.55□□□□□ -2.5
SMD1YGR074W YFR010W-AP0C5N0 62 aa-0.56□□□□□ -2.5
SMD1YGR074W THO2P53552 1597 aaKnown RBP-0.57□□□□□ -2.5
SMD1YGR074W PDR5P33302 1511 aaKnown RBP-0.57□□□□□ -2.5
SMD1YGR074W NUP188P52593 1655 aaKnown RBP-0.57□□□□□ -2.5
SMD1YGR074W TOM1Q03280 3268 aa-0.57□□□□□ -2.5
SMD1YGR074W USO1P25386 1790 aa-0.59□□□□□ -2.5
SMD1YGR074W YPR010C-AA5Z2X5 72 aa-0.59□□□□□ -2.5
SMD1YGR074W BUD3P25558 1636 aa-0.6□□□□□ -2.51
SMD1YGR074W YOR316C-AQ3E806 69 aa-0.62□□□□□ -2.51
SMD1YGR074W YMR105W-AQ8TGS8 64 aa-0.63□□□□□ -2.51
SMD1YGR074W CDC25P04821 1589 aa-0.64□□□□□ -2.51
SMD1YGR074W SSK2P53599 1579 aa-0.64□□□□□ -2.51
SMD1YGR074W TRA1P38811 3744 aa-0.64□□□□□ -2.51
SMD1YGR074W NUP192P47054 1683 aa-0.67□□□□□ -2.52
SMD1YGR074W Q0017Q9ZZX8 53 aa-0.68□□□□□ -2.52
SMD1YGR074W FLO1P32768 1537 aa-0.7□□□□□ -2.52
SMD1YGR074W YDR034C-AP0C289 58 aa-0.71□□□□□ -2.52
SMD1YGR074W ATG2P53855 1592 aa-0.71□□□□□ -2.52
SMD1YGR074W SPT6P23615 1451 aaKnown RBP-0.72□□□□□ -2.52
SMD1YGR074W GCN2P15442 1659 aa-0.74□□□□□ -2.53
SMD1YGR074W NUP170P38181 1502 aa-0.74□□□□□ -2.53
SMD1YGR074W YML054C-AQ3E809 52 aa-0.75□□□□□ -2.53
SMD1YGR074W STU1P38198 1513 aa-0.75□□□□□ -2.53
SMD1YGR074W RPL29P05747 59 aaPredicted RBP-0.76□□□□□ -2.53
SMD1YGR074W ULS1Q08562 1619 aa-0.77□□□□□ -2.53
SMD1YGR074W COX9P07255 59 aa-0.78□□□□□ -2.53
SMD1YGR074W PEP1P32319 1579 aa-0.79□□□□□ -2.54
SMD1YGR074W MON2P48563 1636 aaPredicted RBP-0.79□□□□□ -2.54
SMD1YGR074W RKR1Q04781 1562 aa-0.8□□□□□ -2.54
SMD1YGR074W HIR3P47171 1648 aa-0.81□□□□□ -2.54
SMD1YGR074W DDR2P89113 61 aa-0.83□□□□□ -2.54
SMD1YGR074W YHR073W-AP0C5N7 58 aa-0.88□□□□□ -2.55
SMD1YGR074W YJL133C-AQ3E7A3 74 aa-0.88□□□□□ -2.55
SMD1YGR074W YDR034W-BQ6Q5X2 51 aa-0.89□□□□□ -2.55
SMD1YGR074W YLR342W-AQ3E810 57 aa-0.92□□□□□ -2.56
SMD1YGR074W YLL066W-BQ8TGJ7 56 aa-0.93□□□□□ -2.56
SMD1YGR074W Q0297Q9ZZV8 51 aa-0.93□□□□□ -2.56
SMD1YGR074W YIL046W-AQ3E7Z4 54 aa-0.96□□□□□ -2.56
SMD1YGR074W TOM7P53507 60 aa-1.02□□□□□ -2.57
SMD1YGR074W HOR7Q05827 59 aa-1.07□□□□□ -2.58
SMD1YGR074W PMP3P87284 55 aa-1.08□□□□□ -2.58
SMD1YGR074W YJL127C-BQ3E828 52 aa-1.09□□□□□ -2.58
SMD1YGR074W SMX2P40204 77 aaKnown RBP-1.11□□□□□ -2.59
SMD1YGR074W RPL39P04650 51 aa-1.21□□□□□ -2.6
SMD1YGR074W CHC1P22137 1653 aaKnown RBP-1.23□□□□□ -2.61
SMD1YGR074W NCE101Q02820 53 aa-1.29□□□□□ -2.62
SMD1YGR074W MLP2P40457 1679 aa-1.32□□□□□ -2.62
Retrieved 63 of 5,963 RNA–protein pairs in 73 ms