RNA–Protein interactions for RNA: YGR002C

SWC4, Transcript of Component of the Swr1p complex that incorporates Htz1p into chromatin, yeastyeast

Gene SWC4, Length 1,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC4YGR002C IRA1P18963 3092 aa1.69□□□□□ -2.14
SWC4YGR002C YCL042WP25572 119 aa1.68□□□□□ -2.14
SWC4YGR002C LCL1Q02786 101 aa1.68□□□□□ -2.14
SWC4YGR002C YOR394C-AQ8TGJ0 55 aa1.68□□□□□ -2.14
SWC4YGR002C AUA1P32450 94 aa1.67□□□□□ -2.14
SWC4YGR002C YHR213W-BQ8TGK1 99 aa1.67□□□□□ -2.14
SWC4YGR002C MDN1Q12019 4910 aaKnown RBP1.67□□□□□ -2.14
SWC4YGR002C YAR064WP39563 99 aa1.66□□□□□ -2.14
SWC4YGR002C YJR128WP47162 119 aa1.66□□□□□ -2.14
SWC4YGR002C YBR072C-AQ3E794 53 aa1.66□□□□□ -2.14
SWC4YGR002C YJL133C-AQ3E7A3 74 aa1.66□□□□□ -2.14
SWC4YGR002C RPL29P05747 59 aaPredicted RBP1.64□□□□□ -2.15
SWC4YGR002C DDR2P89113 61 aa1.64□□□□□ -2.15
SWC4YGR002C YHR086W-AQ3E746 53 aa1.64□□□□□ -2.15
SWC4YGR002C YLL006W-AQ3E814 58 aa1.64□□□□□ -2.15
SWC4YGR002C SEC16P48415 2195 aaKnown RBP1.63□□□□□ -2.15
SWC4YGR002C HHY1P39982 102 aa1.62□□□□□ -2.15
SWC4YGR002C HUA1P40325 198 aa1.62□□□□□ -2.15
SWC4YGR002C BLM10P43583 2143 aa1.61□□□□□ -2.15
SWC4YGR002C RPC10P40422 70 aa1.58□□□□□ -2.16
SWC4YGR002C YHR212W-AP0CX91 67 aa1.57□□□□□ -2.16
SWC4YGR002C RPS27AP35997 82 aaKnown RBP1.57□□□□□ -2.16
SWC4YGR002C YJL127C-BQ3E828 52 aa1.57□□□□□ -2.16
SWC4YGR002C ACC1Q00955 2233 aaKnown RBP1.57□□□□□ -2.16
SWC4YGR002C YBL044WP38194 122 aa1.57□□□□□ -2.16
SWC4YGR002C NCE101Q02820 53 aa1.57□□□□□ -2.16
SWC4YGR002C YGR146C-AQ8TGT9 53 aa1.57□□□□□ -2.16
SWC4YGR002C PMP3P87284 55 aa1.56□□□□□ -2.16
SWC4YGR002C YDR034W-BQ6Q5X2 51 aa1.55□□□□□ -2.16
SWC4YGR002C BEM2P39960 2167 aaKnown RBP1.55□□□□□ -2.16
SWC4YGR002C RPS27BP38711 82 aa1.54□□□□□ -2.16
SWC4YGR002C HOR7Q05827 59 aa1.54□□□□□ -2.16
SWC4YGR002C YOR316C-AQ3E806 69 aa1.54□□□□□ -2.16
SWC4YGR002C YCR108CQ3E819 63 aa1.53□□□□□ -2.16
SWC4YGR002C MEC1P38111 2368 aa1.53□□□□□ -2.16
SWC4YGR002C POL2P21951 2222 aaKnown RBP1.52□□□□□ -2.17
SWC4YGR002C RPL37BP51402 88 aaKnown RBP1.52□□□□□ -2.17
SWC4YGR002C YBR016WP38216 128 aa1.51□□□□□ -2.17
SWC4YGR002C CSF1Q12150 2958 aa1.5□□□□□ -2.17
SWC4YGR002C RPL43AP0CX25 92 aaKnown RBP1.49□□□□□ -2.17
SWC4YGR002C RPL43BP0CX26 92 aa1.49□□□□□ -2.17
SWC4YGR002C YDR524C-BQ3E6R4 66 aa1.49□□□□□ -2.17
SWC4YGR002C YOR072W-BQ3E832 53 aa1.49□□□□□ -2.17
SWC4YGR002C YHR073W-AP0C5N7 58 aa1.48□□□□□ -2.17
SWC4YGR002C HFA1P32874 2273 aa1.45□□□□□ -2.18
SWC4YGR002C URA2P07259 2214 aaKnown RBP1.43□□□□□ -2.18
SWC4YGR002C DYN1P36022 4092 aa1.42□□□□□ -2.18
SWC4YGR002C RPL37AP49166 88 aaKnown RBP1.41□□□□□ -2.18
SWC4YGR002C YDR034C-AP0C289 58 aa1.4□□□□□ -2.19
SWC4YGR002C YOL164W-AQ3E7A5 60 aa1.38□□□□□ -2.19
SWC4YGR002C YMR105W-AQ8TGS8 64 aa1.35□□□□□ -2.19
SWC4YGR002C YLR157W-EP0CF00 54 aa1.34□□□□□ -2.19
SWC4YGR002C TRA1P38811 3744 aa1.33□□□□□ -2.2
SWC4YGR002C RPL39P04650 51 aa1.31□□□□□ -2.2
SWC4YGR002C YML054C-AQ3E809 52 aa1.25□□□□□ -2.21
SWC4YGR002C RPS29BP41058 56 aaKnown RBP1.23□□□□□ -2.21
SWC4YGR002C RPS29AP41057 56 aaKnown RBP1.2□□□□□ -2.22
SWC4YGR002C YLL066W-BQ8TGJ7 56 aa1.2□□□□□ -2.22
SWC4YGR002C YIL046W-AQ3E7Z4 54 aa1.17□□□□□ -2.22
SWC4YGR002C Q0017Q9ZZX8 53 aa1.17□□□□□ -2.22
SWC4YGR002C YHR050W-AQ05451 56 aa1.16□□□□□ -2.22
SWC4YGR002C YBR056W-AI2HB52 66 aa1.11□□□□□ -2.23
SWC4YGR002C Q0297Q9ZZV8 51 aa0.93□□□□□ -2.26
Retrieved 63 of 5,963 RNA–protein pairs in 272.2 ms