RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C RPL29P05747 59 aaPredicted RBP1.36□□□□□ -2.19
SCL1YGL011C DDR2P89113 61 aa1.36□□□□□ -2.19
SCL1YGL011C YLR255CO13574 117 aa1.35□□□□□ -2.19
SCL1YGL011C YBL044WP38194 122 aa1.35□□□□□ -2.19
SCL1YGL011C YJL009WP47078 108 aa1.35□□□□□ -2.19
SCL1YGL011C YJR128WP47162 119 aa1.35□□□□□ -2.19
SCL1YGL011C YGR240C-AQ3E786 66 aa1.35□□□□□ -2.19
SCL1YGL011C YMR105W-AQ8TGS8 64 aa1.35□□□□□ -2.19
SCL1YGL011C HHY1P39982 102 aa1.34□□□□□ -2.19
SCL1YGL011C OLI1P61829 76 aa1.34□□□□□ -2.19
SCL1YGL011C RPL43AP0CX25 92 aaKnown RBP1.33□□□□□ -2.2
SCL1YGL011C RPL43BP0CX26 92 aa1.33□□□□□ -2.2
SCL1YGL011C COX7P10174 60 aa1.33□□□□□ -2.2
SCL1YGL011C YIL086CP40503 102 aa1.33□□□□□ -2.2
SCL1YGL011C YOR394C-AQ8TGJ0 55 aa1.33□□□□□ -2.2
SCL1YGL011C YLR307C-AQ3E825 87 aa1.32□□□□□ -2.2
SCL1YGL011C POL2P21951 2222 aaKnown RBP1.31□□□□□ -2.2
SCL1YGL011C LCL1Q02786 101 aa1.31□□□□□ -2.2
SCL1YGL011C HOR7Q05827 59 aa1.31□□□□□ -2.2
SCL1YGL011C YGR146C-AQ8TGT9 53 aa1.3□□□□□ -2.2
SCL1YGL011C RPC10P40422 70 aa1.29□□□□□ -2.2
SCL1YGL011C YCR108CQ3E819 63 aa1.29□□□□□ -2.2
SCL1YGL011C YDR524C-BQ3E6R4 66 aa1.28□□□□□ -2.2
SCL1YGL011C URA2P07259 2214 aaKnown RBP1.28□□□□□ -2.2
SCL1YGL011C PRP8P33334 2413 aaKnown RBP1.28□□□□□ -2.2
SCL1YGL011C YIL046W-AQ3E7Z4 54 aa1.27□□□□□ -2.21
SCL1YGL011C YOR316C-AQ3E806 69 aa1.24□□□□□ -2.21
SCL1YGL011C YBR072C-AQ3E794 53 aa1.22□□□□□ -2.21
SCL1YGL011C YHR073W-AP0C5N7 58 aa1.21□□□□□ -2.22
SCL1YGL011C YBR016WP38216 128 aa1.21□□□□□ -2.22
SCL1YGL011C YDR034C-AP0C289 58 aa1.18□□□□□ -2.22
SCL1YGL011C YOR072W-BQ3E832 53 aa1.17□□□□□ -2.22
SCL1YGL011C YLL066W-BQ8TGJ7 56 aa1.14□□□□□ -2.23
SCL1YGL011C YOL164W-AQ3E7A5 60 aa1.13□□□□□ -2.23
SCL1YGL011C NUM1Q00402 2748 aa1.12□□□□□ -2.23
SCL1YGL011C MEC1P38111 2368 aa1.06□□□□□ -2.24
SCL1YGL011C Q0297Q9ZZV8 51 aa1.05□□□□□ -2.24
SCL1YGL011C YML054C-AQ3E809 52 aa1.04□□□□□ -2.24
SCL1YGL011C TAO3P40468 2376 aa1.04□□□□□ -2.24
SCL1YGL011C YLR157W-EP0CF00 54 aa1.02□□□□□ -2.25
SCL1YGL011C IRA2P19158 3079 aa0.98□□□□□ -2.25
SCL1YGL011C Q0017Q9ZZX8 53 aa0.97□□□□□ -2.25
SCL1YGL011C RPS29BP41058 56 aaKnown RBP0.93□□□□□ -2.26
SCL1YGL011C VPS13Q07878 3144 aa0.92□□□□□ -2.26
SCL1YGL011C YHR050W-AQ05451 56 aa0.92□□□□□ -2.26
SCL1YGL011C YDR034W-BQ6Q5X2 51 aa0.92□□□□□ -2.26
SCL1YGL011C GCN1P33892 2672 aaKnown RBP0.92□□□□□ -2.26
SCL1YGL011C TRA1P38811 3744 aa0.91□□□□□ -2.26
SCL1YGL011C UTP20P35194 2493 aaKnown RBP0.91□□□□□ -2.26
SCL1YGL011C YBR056W-AI2HB52 66 aa0.9□□□□□ -2.27
SCL1YGL011C CSF1Q12150 2958 aa0.89□□□□□ -2.27
SCL1YGL011C FMP27Q06179 2628 aa0.89□□□□□ -2.27
SCL1YGL011C TOM1Q03280 3268 aa0.89□□□□□ -2.27
SCL1YGL011C YPR117WQ06116 2489 aa0.88□□□□□ -2.27
SCL1YGL011C MDN1Q12019 4910 aaKnown RBP0.87□□□□□ -2.27
SCL1YGL011C RPS29AP41057 56 aaKnown RBP0.87□□□□□ -2.27
SCL1YGL011C TOR1P35169 2470 aa0.86□□□□□ -2.27
SCL1YGL011C IRA1P18963 3092 aa0.85□□□□□ -2.27
SCL1YGL011C DYN1P36022 4092 aa0.81□□□□□ -2.28
SCL1YGL011C TOR2P32600 2474 aaKnown RBP0.8□□□□□ -2.28
SCL1YGL011C TEL1P38110 2787 aa0.75□□□□□ -2.29
SCL1YGL011C CUP1-1P0CX80 61 aa0.66□□□□□ -2.3
SCL1YGL011C CUP1-2P0CX81 61 aa0.66□□□□□ -2.3
Retrieved 63 of 5,963 RNA–protein pairs in 31.6 ms