RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W RPL33BP41056 107 aaKnown RBP0.64□□□□□ -2.31
SMC1YFL008W YJL009WP47078 108 aa0.64□□□□□ -2.31
SMC1YFL008W HFA1P32874 2273 aa0.64□□□□□ -2.31
SMC1YFL008W LCL1Q02786 101 aa0.64□□□□□ -2.31
SMC1YFL008W YMR105W-AQ8TGS8 64 aa0.64□□□□□ -2.31
SMC1YFL008W RTC6O14464 93 aa0.63□□□□□ -2.31
SMC1YFL008W YIL156W-BQ2V2P4 73 aa0.63□□□□□ -2.31
SMC1YFL008W RPL39P04650 51 aa0.63□□□□□ -2.31
SMC1YFL008W YEL014CP39999 101 aa0.63□□□□□ -2.31
SMC1YFL008W YOR034C-AQ3E735 80 aa0.63□□□□□ -2.31
SMC1YFL008W RDS3Q06835 107 aaPredicted RBP0.63□□□□□ -2.31
SMC1YFL008W YOR316C-AQ3E806 69 aa0.63□□□□□ -2.31
SMC1YFL008W GCN1P33892 2672 aaKnown RBP0.63□□□□□ -2.31
SMC1YFL008W AUA1P32450 94 aa0.62□□□□□ -2.31
SMC1YFL008W YHR086W-AQ3E746 53 aa0.62□□□□□ -2.31
SMC1YFL008W YBR072C-AQ3E794 53 aa0.62□□□□□ -2.31
SMC1YFL008W YGR146C-AQ8TGT9 53 aa0.62□□□□□ -2.31
SMC1YFL008W YHR073W-AP0C5N7 58 aa0.62□□□□□ -2.31
SMC1YFL008W LCL2Q08045 131 aa0.62□□□□□ -2.31
SMC1YFL008W RPL33AP05744 107 aaKnown RBP0.62□□□□□ -2.31
SMC1YFL008W YOR394C-AQ8TGJ0 55 aa0.62□□□□□ -2.31
SMC1YFL008W YOR072W-BQ3E832 53 aa0.61□□□□□ -2.31
SMC1YFL008W RPL43AP0CX25 92 aaKnown RBP0.6□□□□□ -2.31
SMC1YFL008W RPL43BP0CX26 92 aa0.6□□□□□ -2.31
SMC1YFL008W YML054C-AQ3E809 52 aa0.6□□□□□ -2.31
SMC1YFL008W YBL044WP38194 122 aa0.6□□□□□ -2.31
SMC1YFL008W YLR255CO13574 117 aa0.6□□□□□ -2.31
SMC1YFL008W RPL37BP51402 88 aaKnown RBP0.6□□□□□ -2.31
SMC1YFL008W POL2P21951 2222 aaKnown RBP0.59□□□□□ -2.31
SMC1YFL008W NUM1Q00402 2748 aa0.59□□□□□ -2.31
SMC1YFL008W HHY1P39982 102 aa0.59□□□□□ -2.32
SMC1YFL008W BRR2P32639 2163 aaKnown RBP0.59□□□□□ -2.32
SMC1YFL008W BLM10P43583 2143 aa0.59□□□□□ -2.32
SMC1YFL008W YHR212W-AP0CX91 67 aa0.59□□□□□ -2.32
SMC1YFL008W YHR032W-AP0C5N6 59 aa0.58□□□□□ -2.32
SMC1YFL008W YJR128WP47162 119 aa0.58□□□□□ -2.32
SMC1YFL008W YDR034C-AP0C289 58 aa0.58□□□□□ -2.32
SMC1YFL008W BPH1P25356 2167 aa0.57□□□□□ -2.32
SMC1YFL008W YDR210WQ03482 75 aa0.57□□□□□ -2.32
SMC1YFL008W CMC4Q3E7A9 73 aa0.57□□□□□ -2.32
SMC1YFL008W TAR1Q8TGM6 124 aa0.57□□□□□ -2.32
SMC1YFL008W Q0017Q9ZZX8 53 aa0.57□□□□□ -2.32
SMC1YFL008W YBR016WP38216 128 aa0.57□□□□□ -2.32
SMC1YFL008W SEC16P48415 2195 aaKnown RBP0.56□□□□□ -2.32
SMC1YFL008W URA2P07259 2214 aaKnown RBP0.56□□□□□ -2.32
SMC1YFL008W SEN1Q00416 2231 aaKnown RBP0.56□□□□□ -2.32
SMC1YFL008W RPL37AP49166 88 aaKnown RBP0.55□□□□□ -2.32
SMC1YFL008W YCR108CQ3E819 63 aa0.55□□□□□ -2.32
SMC1YFL008W YLL066W-BQ8TGJ7 56 aa0.55□□□□□ -2.32
SMC1YFL008W Q0297Q9ZZV8 51 aa0.55□□□□□ -2.32
SMC1YFL008W FMP27Q06179 2628 aa0.54□□□□□ -2.32
SMC1YFL008W YCL042WP25572 119 aa0.54□□□□□ -2.32
SMC1YFL008W TAO3P40468 2376 aa0.51□□□□□ -2.33
SMC1YFL008W YPR117WQ06116 2489 aa0.51□□□□□ -2.33
SMC1YFL008W YHR050W-AQ05451 56 aa0.5□□□□□ -2.33
SMC1YFL008W YOL164W-AQ3E7A5 60 aa0.49□□□□□ -2.33
SMC1YFL008W RPS29AP41057 56 aaKnown RBP0.48□□□□□ -2.33
SMC1YFL008W MEC1P38111 2368 aa0.47□□□□□ -2.33
SMC1YFL008W RPS29BP41058 56 aaKnown RBP0.46□□□□□ -2.34
SMC1YFL008W YLR157W-EP0CF00 54 aa0.46□□□□□ -2.34
SMC1YFL008W TOR1P35169 2470 aa0.42□□□□□ -2.34
SMC1YFL008W UTP20P35194 2493 aaKnown RBP0.39□□□□□ -2.35
SMC1YFL008W TOR2P32600 2474 aaKnown RBP0.38□□□□□ -2.35
Retrieved 63 of 5,963 RNA–protein pairs in 11.2 ms