RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W YBL039W-BP0C268 59 aa1.23□□□□□ -2.21
UBC6YER100W YIL102C-AQ2V2P5 75 aa1.23□□□□□ -2.21
UBC6YER100W YIL046W-AQ3E7Z4 54 aa1.23□□□□□ -2.21
UBC6YER100W TOM1Q03280 3268 aa1.22□□□□□ -2.21
UBC6YER100W YBL044WP38194 122 aa1.22□□□□□ -2.21
UBC6YER100W YSY6P38374 65 aa1.22□□□□□ -2.21
UBC6YER100W YKL023C-AQ2V2P3 75 aa1.22□□□□□ -2.21
UBC6YER100W YLR342W-AQ3E810 57 aa1.22□□□□□ -2.21
UBC6YER100W RPL39P04650 51 aa1.21□□□□□ -2.22
UBC6YER100W YOR008C-AQ3E7B9 74 aa1.2□□□□□ -2.22
UBC6YER100W YOR011W-AQ3E807 68 aa1.2□□□□□ -2.22
UBC6YER100W YMR105W-AQ8TGS8 64 aa1.2□□□□□ -2.22
UBC6YER100W TOS6P48560 102 aa1.19□□□□□ -2.22
UBC6YER100W SEN1Q00416 2231 aaKnown RBP1.19□□□□□ -2.22
UBC6YER100W YPR117WQ06116 2489 aa1.17□□□□□ -2.22
UBC6YER100W FMP27Q06179 2628 aa1.17□□□□□ -2.22
UBC6YER100W YDR034W-BQ6Q5X2 51 aa1.17□□□□□ -2.22
UBC6YER100W YOR394C-AQ8TGJ0 55 aa1.17□□□□□ -2.22
UBC6YER100W VPS13Q07878 3144 aa1.16□□□□□ -2.22
UBC6YER100W PMP3P87284 55 aa1.16□□□□□ -2.22
UBC6YER100W HOR7Q05827 59 aa1.16□□□□□ -2.22
UBC6YER100W YCR108CQ3E819 63 aa1.16□□□□□ -2.22
UBC6YER100W RPS30AP0CX33 63 aaKnown RBP1.14□□□□□ -2.23
UBC6YER100W RPS30BP0CX34 63 aaKnown RBP1.14□□□□□ -2.23
UBC6YER100W YDR246W-AQ3E763 66 aa1.14□□□□□ -2.23
UBC6YER100W TOR2P32600 2474 aaKnown RBP1.13□□□□□ -2.23
UBC6YER100W YDR182W-AQ3E796 67 aa1.13□□□□□ -2.23
UBC6YER100W YPR010C-AA5Z2X5 72 aa1.12□□□□□ -2.23
UBC6YER100W YLL006W-AQ3E814 58 aa1.12□□□□□ -2.23
UBC6YER100W GCN1P33892 2672 aaKnown RBP1.11□□□□□ -2.23
UBC6YER100W Q0297Q9ZZV8 51 aa1.1□□□□□ -2.23
UBC6YER100W CSF1Q12150 2958 aa1.1□□□□□ -2.23
UBC6YER100W RPL29P05747 59 aaPredicted RBP1.09□□□□□ -2.23
UBC6YER100W YJL127C-BQ3E828 52 aa1.08□□□□□ -2.24
UBC6YER100W YBR230W-AQ3E762 66 aa1.07□□□□□ -2.24
UBC6YER100W YJL133C-AQ3E7A3 74 aa1.07□□□□□ -2.24
UBC6YER100W IRA2P19158 3079 aa1.07□□□□□ -2.24
UBC6YER100W IRA1P18963 3092 aa1.07□□□□□ -2.24
UBC6YER100W MEC1P38111 2368 aa1.06□□□□□ -2.24
UBC6YER100W DDR2P89113 61 aa1.05□□□□□ -2.24
UBC6YER100W TRA1P38811 3744 aa1.04□□□□□ -2.24
UBC6YER100W UTP20P35194 2493 aaKnown RBP1.03□□□□□ -2.24
UBC6YER100W YBR056W-AI2HB52 66 aa1.03□□□□□ -2.24
UBC6YER100W YLR157W-DP0CE99 70 aa1.03□□□□□ -2.24
UBC6YER100W YOL166W-AQ8TGJ1 51 aa1.03□□□□□ -2.24
UBC6YER100W TOR1P35169 2470 aa1.02□□□□□ -2.25
UBC6YER100W TEL1P38110 2787 aa1.02□□□□□ -2.25
UBC6YER100W YLL066W-BQ8TGJ7 56 aa1.02□□□□□ -2.25
UBC6YER100W YDR034C-AP0C289 58 aa1.01□□□□□ -2.25
UBC6YER100W YMR001C-AQ8TGS9 76 aa1.01□□□□□ -2.25
UBC6YER100W YHR073W-AP0C5N7 58 aa0.97□□□□□ -2.25
UBC6YER100W YGR146C-AQ8TGT9 53 aa0.97□□□□□ -2.25
UBC6YER100W NUM1Q00402 2748 aa0.97□□□□□ -2.25
UBC6YER100W CUP1-1P0CX80 61 aa0.96□□□□□ -2.26
UBC6YER100W CUP1-2P0CX81 61 aa0.96□□□□□ -2.26
UBC6YER100W YOR316C-AQ3E806 69 aa0.95□□□□□ -2.26
UBC6YER100W DYN1P36022 4092 aa0.93□□□□□ -2.26
UBC6YER100W YML054C-AQ3E809 52 aa0.87□□□□□ -2.27
UBC6YER100W YOR072W-BQ3E832 53 aa0.86□□□□□ -2.27
UBC6YER100W Q0017Q9ZZX8 53 aa0.86□□□□□ -2.27
UBC6YER100W MDN1Q12019 4910 aaKnown RBP0.78□□□□□ -2.29
UBC6YER100W RPS29AP41057 56 aaKnown RBP0.76□□□□□ -2.29
UBC6YER100W YHR050W-AQ05451 56 aa0.7□□□□□ -2.3
Retrieved 63 of 5,963 RNA–protein pairs in 14.9 ms