RNA–Protein interactions for RNA: YDR495C

VPS3, Transcript of Component of CORVET membrane tethering complex, yeastyeast

Gene VPS3, Length 3,036 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS3YDR495C YMR001C-AQ8TGS9 76 aa1.28□□□□□ -2.2
VPS3YDR495C RPS27AP35997 82 aaKnown RBP1.28□□□□□ -2.2
VPS3YDR495C YOR394C-AQ8TGJ0 55 aa1.27□□□□□ -2.21
VPS3YDR495C YOL164W-AQ3E7A5 60 aa1.26□□□□□ -2.21
VPS3YDR495C RPL37BP51402 88 aaKnown RBP1.25□□□□□ -2.21
VPS3YDR495C TEL1P38110 2787 aa1.25□□□□□ -2.21
VPS3YDR495C YLR157W-DP0CE99 70 aa1.24□□□□□ -2.21
VPS3YDR495C YBR016WP38216 128 aa1.24□□□□□ -2.21
VPS3YDR495C OLI1P61829 76 aa1.18□□□□□ -2.22
VPS3YDR495C GCN1P33892 2672 aaKnown RBP1.18□□□□□ -2.22
VPS3YDR495C YFR009W-AP0C5M9 85 aa1.17□□□□□ -2.22
VPS3YDR495C YBL044WP38194 122 aa1.17□□□□□ -2.22
VPS3YDR495C YGR025WP53216 100 aa1.17□□□□□ -2.22
VPS3YDR495C RPS27BP38711 82 aa1.15□□□□□ -2.23
VPS3YDR495C YBR230W-AQ3E762 66 aa1.14□□□□□ -2.23
VPS3YDR495C PRP8P33334 2413 aaKnown RBP1.14□□□□□ -2.23
VPS3YDR495C YPR010C-AA5Z2X5 72 aa1.1□□□□□ -2.23
VPS3YDR495C SMX2P40204 77 aaKnown RBP1.09□□□□□ -2.23
VPS3YDR495C SEN1Q00416 2231 aaKnown RBP1.08□□□□□ -2.24
VPS3YDR495C RPS29BP41058 56 aaKnown RBP1.06□□□□□ -2.24
VPS3YDR495C YCR108CQ3E819 63 aa1.06□□□□□ -2.24
VPS3YDR495C SIP18P50263 79 aa1.05□□□□□ -2.24
VPS3YDR495C YGR146C-AQ8TGT9 53 aa1.02□□□□□ -2.25
VPS3YDR495C FMP27Q06179 2628 aa1.02□□□□□ -2.25
VPS3YDR495C TAO3P40468 2376 aa1.02□□□□□ -2.25
VPS3YDR495C TOS6P48560 102 aa1□□□□□ -2.25
VPS3YDR495C YOR008C-AQ3E7B9 74 aa0.98□□□□□ -2.25
VPS3YDR495C UTP20P35194 2493 aaKnown RBP0.94□□□□□ -2.26
VPS3YDR495C TOR2P32600 2474 aaKnown RBP0.89□□□□□ -2.27
VPS3YDR495C YDR524C-BQ3E6R4 66 aa0.87□□□□□ -2.27
VPS3YDR495C IRA1P18963 3092 aa0.87□□□□□ -2.27
VPS3YDR495C YLR342W-AQ3E810 57 aa0.86□□□□□ -2.27
VPS3YDR495C YIL046W-AQ3E7Z4 54 aa0.85□□□□□ -2.27
VPS3YDR495C YLL006W-AQ3E814 58 aa0.83□□□□□ -2.28
VPS3YDR495C YJL133C-AQ3E7A3 74 aa0.83□□□□□ -2.28
VPS3YDR495C COA2Q3E823 68 aa0.8□□□□□ -2.28
VPS3YDR495C YOR072W-BQ3E832 53 aa0.8□□□□□ -2.28
VPS3YDR495C COX9P07255 59 aa0.79□□□□□ -2.28
VPS3YDR495C YOR316C-AQ3E806 69 aa0.79□□□□□ -2.28
VPS3YDR495C DDR2P89113 61 aa0.79□□□□□ -2.28
VPS3YDR495C RPS29AP41057 56 aaKnown RBP0.78□□□□□ -2.28
VPS3YDR495C YGL258W-AQ3E740 77 aa0.77□□□□□ -2.29
VPS3YDR495C TOM1Q03280 3268 aa0.74□□□□□ -2.29
VPS3YDR495C TOM7P53507 60 aa0.67□□□□□ -2.3
VPS3YDR495C RPL29P05747 59 aaPredicted RBP0.67□□□□□ -2.3
VPS3YDR495C YDR034C-AP0C289 58 aa0.64□□□□□ -2.31
VPS3YDR495C YJL127C-BQ3E828 52 aa0.64□□□□□ -2.31
VPS3YDR495C YHR073W-AP0C5N7 58 aa0.61□□□□□ -2.31
VPS3YDR495C Q0297Q9ZZV8 51 aa0.56□□□□□ -2.32
VPS3YDR495C MEC1P38111 2368 aa0.55□□□□□ -2.32
VPS3YDR495C VPS13Q07878 3144 aa0.54□□□□□ -2.32
VPS3YDR495C YHR050W-AQ05451 56 aa0.53□□□□□ -2.32
VPS3YDR495C CSF1Q12150 2958 aa0.48□□□□□ -2.33
VPS3YDR495C IRA2P19158 3079 aa0.48□□□□□ -2.33
VPS3YDR495C TRA1P38811 3744 aa0.43□□□□□ -2.34
VPS3YDR495C Q0017Q9ZZX8 53 aa0.42□□□□□ -2.34
VPS3YDR495C HOR7Q05827 59 aa0.41□□□□□ -2.34
VPS3YDR495C PMP3P87284 55 aa0.4□□□□□ -2.34
VPS3YDR495C YML054C-AQ3E809 52 aa0.4□□□□□ -2.35
VPS3YDR495C NCE101Q02820 53 aa0.31□□□□□ -2.36
VPS3YDR495C YMR105W-AQ8TGS8 64 aa0.11□□□□□ -2.39
VPS3YDR495C YLL066W-BQ8TGJ7 56 aa0.09□□□□□ -2.4
VPS3YDR495C RPL39P04650 51 aa-0.1□□□□□ -2.42
Retrieved 63 of 5,963 RNA–protein pairs in 6.4 ms