RNA–Protein interactions for RNA: YDR494W

RSM28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene RSM28, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSM28YDR494W YBR056W-AI2HB52 66 aa-0.34□□□□□ -2.46
RSM28YDR494W YHR050W-AQ05451 56 aa-0.34□□□□□ -2.46
RSM28YDR494W YBT1P32386 1661 aa-0.37□□□□□ -2.47
RSM28YDR494W YOR093CQ12275 1648 aa-0.37□□□□□ -2.47
RSM28YDR494W YPR010C-AA5Z2X5 72 aa-0.4□□□□□ -2.47
RSM28YDR494W YCF1P39109 1515 aaKnown RBP-0.41□□□□□ -2.48
RSM28YDR494W FIG2P25653 1609 aa-0.42□□□□□ -2.48
RSM28YDR494W DYN1P36022 4092 aa-0.42□□□□□ -2.48
RSM28YDR494W YKL023C-AQ2V2P3 75 aa-0.42□□□□□ -2.48
RSM28YDR494W CDC25P04821 1589 aa-0.42□□□□□ -2.48
RSM28YDR494W PDR5P33302 1511 aaKnown RBP-0.44□□□□□ -2.48
RSM28YDR494W THO2P53552 1597 aaKnown RBP-0.47□□□□□ -2.48
RSM28YDR494W GCN1P33892 2672 aaKnown RBP-0.48□□□□□ -2.49
RSM28YDR494W NUP188P52593 1655 aaKnown RBP-0.48□□□□□ -2.49
RSM28YDR494W SPT6P23615 1451 aaKnown RBP-0.49□□□□□ -2.49
RSM28YDR494W BUD3P25558 1636 aa-0.5□□□□□ -2.49
RSM28YDR494W YOR316C-AQ3E806 69 aa-0.51□□□□□ -2.49
RSM28YDR494W FLO1P32768 1537 aa-0.53□□□□□ -2.49
RSM28YDR494W YDR034C-AP0C289 58 aa-0.53□□□□□ -2.49
RSM28YDR494W USO1P25386 1790 aa-0.53□□□□□ -2.49
RSM28YDR494W MDN1Q12019 4910 aaKnown RBP-0.54□□□□□ -2.5
RSM28YDR494W GCN2P15442 1659 aa-0.54□□□□□ -2.5
RSM28YDR494W NUP192P47054 1683 aa-0.54□□□□□ -2.5
RSM28YDR494W SSK2P53599 1579 aa-0.54□□□□□ -2.5
RSM28YDR494W RPL29P05747 59 aaPredicted RBP-0.55□□□□□ -2.5
RSM28YDR494W Q0017Q9ZZX8 53 aa-0.55□□□□□ -2.5
RSM28YDR494W CSF1Q12150 2958 aa-0.57□□□□□ -2.5
RSM28YDR494W STU1P38198 1513 aa-0.57□□□□□ -2.5
RSM28YDR494W ATG2P53855 1592 aa-0.57□□□□□ -2.5
RSM28YDR494W HIR3P47171 1648 aa-0.59□□□□□ -2.5
RSM28YDR494W MON2P48563 1636 aaPredicted RBP-0.6□□□□□ -2.51
RSM28YDR494W ULS1Q08562 1619 aa-0.6□□□□□ -2.51
RSM28YDR494W TRA1P38811 3744 aa-0.61□□□□□ -2.51
RSM28YDR494W NUP170P38181 1502 aa-0.62□□□□□ -2.51
RSM28YDR494W YJL133C-AQ3E7A3 74 aa-0.62□□□□□ -2.51
RSM28YDR494W YML054C-AQ3E809 52 aa-0.62□□□□□ -2.51
RSM28YDR494W DDR2P89113 61 aa-0.63□□□□□ -2.51
RSM28YDR494W IRA1P18963 3092 aa-0.64□□□□□ -2.51
RSM28YDR494W PEP1P32319 1579 aa-0.64□□□□□ -2.51
RSM28YDR494W RKR1Q04781 1562 aa-0.65□□□□□ -2.51
RSM28YDR494W YLR342W-AQ3E810 57 aa-0.65□□□□□ -2.51
RSM28YDR494W COX9P07255 59 aa-0.67□□□□□ -2.52
RSM28YDR494W YHR073W-AP0C5N7 58 aa-0.72□□□□□ -2.52
RSM28YDR494W NUM1Q00402 2748 aa-0.73□□□□□ -2.53
RSM28YDR494W CUP1-1P0CX80 61 aa-0.73□□□□□ -2.53
RSM28YDR494W CUP1-2P0CX81 61 aa-0.73□□□□□ -2.53
RSM28YDR494W IRA2P19158 3079 aa-0.78□□□□□ -2.53
RSM28YDR494W YJL127C-BQ3E828 52 aa-0.78□□□□□ -2.53
RSM28YDR494W VPS13Q07878 3144 aa-0.83□□□□□ -2.54
RSM28YDR494W SMX2P40204 77 aaKnown RBP-0.83□□□□□ -2.54
RSM28YDR494W YMR105W-AQ8TGS8 64 aa-0.88□□□□□ -2.55
RSM28YDR494W PMP3P87284 55 aa-0.93□□□□□ -2.56
RSM28YDR494W CHC1P22137 1653 aaKnown RBP-0.96□□□□□ -2.56
RSM28YDR494W TOM7P53507 60 aa-0.98□□□□□ -2.57
RSM28YDR494W MLP2P40457 1679 aa-1.02□□□□□ -2.57
RSM28YDR494W HOR7Q05827 59 aa-1.03□□□□□ -2.57
RSM28YDR494W YLL066W-BQ8TGJ7 56 aa-1.12□□□□□ -2.59
RSM28YDR494W NCE101Q02820 53 aa-1.29□□□□□ -2.62
RSM28YDR494W TOM1Q03280 3268 aa-1.37□□□□□ -2.63
RSM28YDR494W RPL39P04650 51 aa-1.55□□□□□ -2.66
RSM28YDR494W YIL046W-AQ3E7Z4 54 aa-1.88□□□□□ -2.71
RSM28YDR494W Q0297Q9ZZV8 51 aa-1.89□□□□□ -2.71
RSM28YDR494W YDR034W-BQ6Q5X2 51 aa-2.74□□□□□ -2.85
Retrieved 63 of 5,963 RNA–protein pairs in 30.4 ms