RNA–Protein interactions for RNA: YDR485C

VPS72, Transcript of Htz1p-binding component of the SWR1 complex, yeastyeast

Gene VPS72, Length 2,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS72YDR485C STU1P38198 1513 aa1.86□□□□□ -2.11
VPS72YDR485C YPR010C-AA5Z2X5 72 aa1.84□□□□□ -2.11
VPS72YDR485C ATG2P53855 1592 aa1.83□□□□□ -2.12
VPS72YDR485C RKR1Q04781 1562 aa1.82□□□□□ -2.12
VPS72YDR485C YGR146C-AQ8TGT9 53 aa1.77□□□□□ -2.13
VPS72YDR485C TOS6P48560 102 aa1.76□□□□□ -2.13
VPS72YDR485C YOR008C-AQ3E7B9 74 aa1.72□□□□□ -2.13
VPS72YDR485C BUD3P25558 1636 aa1.71□□□□□ -2.14
VPS72YDR485C NUP170P38181 1502 aa1.71□□□□□ -2.14
VPS72YDR485C FIG2P25653 1609 aa1.64□□□□□ -2.15
VPS72YDR485C CHC1P22137 1653 aaKnown RBP1.6□□□□□ -2.15
VPS72YDR485C MLP2P40457 1679 aa1.58□□□□□ -2.16
VPS72YDR485C SMX2P40204 77 aaKnown RBP1.56□□□□□ -2.16
VPS72YDR485C UTP20P35194 2493 aaKnown RBP1.55□□□□□ -2.16
VPS72YDR485C YLL006W-AQ3E814 58 aa1.52□□□□□ -2.17
VPS72YDR485C YPR117WQ06116 2489 aa1.5□□□□□ -2.17
VPS72YDR485C GCN2P15442 1659 aa1.5□□□□□ -2.17
VPS72YDR485C TOR1P35169 2470 aa1.49□□□□□ -2.17
VPS72YDR485C NUM1Q00402 2748 aa1.46□□□□□ -2.18
VPS72YDR485C YGL258W-AQ3E740 77 aa1.4□□□□□ -2.19
VPS72YDR485C YBR056W-AI2HB52 66 aa1.38□□□□□ -2.19
VPS72YDR485C CUP1-1P0CX80 61 aa1.36□□□□□ -2.19
VPS72YDR485C CUP1-2P0CX81 61 aa1.36□□□□□ -2.19
VPS72YDR485C YOR072W-BQ3E832 53 aa1.36□□□□□ -2.19
VPS72YDR485C TOR2P32600 2474 aaKnown RBP1.36□□□□□ -2.19
VPS72YDR485C YDR524C-BQ3E6R4 66 aa1.35□□□□□ -2.19
VPS72YDR485C YLR342W-AQ3E810 57 aa1.35□□□□□ -2.19
VPS72YDR485C TOM1Q03280 3268 aa1.34□□□□□ -2.19
VPS72YDR485C YJL133C-AQ3E7A3 74 aa1.34□□□□□ -2.2
VPS72YDR485C COA2Q3E823 68 aa1.32□□□□□ -2.2
VPS72YDR485C TEL1P38110 2787 aa1.29□□□□□ -2.2
VPS72YDR485C RPS29AP41057 56 aaKnown RBP1.29□□□□□ -2.2
VPS72YDR485C GCN1P33892 2672 aaKnown RBP1.28□□□□□ -2.2
VPS72YDR485C VPS13Q07878 3144 aa1.26□□□□□ -2.21
VPS72YDR485C YDR034W-BQ6Q5X2 51 aa1.24□□□□□ -2.21
VPS72YDR485C YOR316C-AQ3E806 69 aa1.23□□□□□ -2.21
VPS72YDR485C FMP27Q06179 2628 aa1.22□□□□□ -2.21
VPS72YDR485C FLO1P32768 1537 aa1.21□□□□□ -2.22
VPS72YDR485C DDR2P89113 61 aa1.18□□□□□ -2.22
VPS72YDR485C COX9P07255 59 aa1.18□□□□□ -2.22
VPS72YDR485C MEC1P38111 2368 aa1.12□□□□□ -2.23
VPS72YDR485C IRA2P19158 3079 aa1.1□□□□□ -2.23
VPS72YDR485C IRA1P18963 3092 aa1.08□□□□□ -2.24
VPS72YDR485C CSF1Q12150 2958 aa1.05□□□□□ -2.24
VPS72YDR485C TRA1P38811 3744 aa1.03□□□□□ -2.24
VPS72YDR485C YDR034C-AP0C289 58 aa1.03□□□□□ -2.24
VPS72YDR485C TOM7P53507 60 aa0.98□□□□□ -2.25
VPS72YDR485C YIL046W-AQ3E7Z4 54 aa0.98□□□□□ -2.25
VPS72YDR485C DYN1P36022 4092 aa0.98□□□□□ -2.25
VPS72YDR485C YJL127C-BQ3E828 52 aa0.94□□□□□ -2.26
VPS72YDR485C MDN1Q12019 4910 aaKnown RBP0.94□□□□□ -2.26
VPS72YDR485C RPL29P05747 59 aaPredicted RBP0.89□□□□□ -2.27
VPS72YDR485C YHR050W-AQ05451 56 aa0.86□□□□□ -2.27
VPS72YDR485C YHR073W-AP0C5N7 58 aa0.81□□□□□ -2.28
VPS72YDR485C Q0297Q9ZZV8 51 aa0.81□□□□□ -2.28
VPS72YDR485C Q0017Q9ZZX8 53 aa0.61□□□□□ -2.31
VPS72YDR485C NCE101Q02820 53 aa0.59□□□□□ -2.31
VPS72YDR485C HOR7Q05827 59 aa0.57□□□□□ -2.32
VPS72YDR485C YML054C-AQ3E809 52 aa0.55□□□□□ -2.32
VPS72YDR485C RPL39P04650 51 aa0.55□□□□□ -2.32
VPS72YDR485C YMR105W-AQ8TGS8 64 aa0.51□□□□□ -2.33
VPS72YDR485C PMP3P87284 55 aa0.48□□□□□ -2.33
VPS72YDR485C YLL066W-BQ8TGJ7 56 aa0.42□□□□□ -2.34
Retrieved 63 of 5,963 RNA–protein pairs in 33.8 ms