RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	YDR246W-A	Q3E763	66 aa		0.64	□□□□□ -2.31
TFB1	YDR311W	CSF1	Q12150	2958 aa		0.63	□□□□□ -2.31
TFB1	YDR311W	YDR524C-B	Q3E6R4	66 aa		0.62	□□□□□ -2.31
TFB1	YDR311W	DYN1	P36022	4092 aa		0.62	□□□□□ -2.31
TFB1	YDR311W	YLR146W-A	Q2V2P1	62 aa		0.61	□□□□□ -2.31
TFB1	YDR311W	RPS27A	P35997	82 aa	Known RBP	0.6	□□□□□ -2.31
TFB1	YDR311W	YBL044W	P38194	122 aa		0.6	□□□□□ -2.31
TFB1	YDR311W	YBR200W-A	Q3E755	54 aa		0.6	□□□□□ -2.31
TFB1	YDR311W	YGR025W	P53216	100 aa		0.59	□□□□□ -2.32
TFB1	YDR311W	YBL039W-B	P0C268	59 aa		0.57	□□□□□ -2.32
TFB1	YDR311W	YSY6	P38374	65 aa		0.56	□□□□□ -2.32
TFB1	YDR311W	YIL046W-A	Q3E7Z4	54 aa		0.56	□□□□□ -2.32
TFB1	YDR311W	YOL131W	Q08270	108 aa		0.56	□□□□□ -2.32
TFB1	YDR311W	RPS30A	P0CX33	63 aa	Known RBP	0.55	□□□□□ -2.32
TFB1	YDR311W	RPS30B	P0CX34	63 aa	Known RBP	0.55	□□□□□ -2.32
TFB1	YDR311W	YOR011W-A	Q3E807	68 aa		0.55	□□□□□ -2.32
TFB1	YDR311W	HUB1	Q6Q546	73 aa		0.55	□□□□□ -2.32
TFB1	YDR311W	YOR394C-A	Q8TGJ0	55 aa		0.55	□□□□□ -2.32
TFB1	YDR311W	YCR108C	Q3E819	63 aa		0.54	□□□□□ -2.32
TFB1	YDR311W	YIL102C-A	Q2V2P5	75 aa		0.54	□□□□□ -2.32
TFB1	YDR311W	YDR182W-A	Q3E796	67 aa		0.52	□□□□□ -2.33
TFB1	YDR311W	YFR010W-A	P0C5N0	62 aa		0.52	□□□□□ -2.33
TFB1	YDR311W	TRA1	P38811	3744 aa		0.51	□□□□□ -2.33
TFB1	YDR311W	OLI1	P61829	76 aa		0.5	□□□□□ -2.33
TFB1	YDR311W	YOL166W-A	Q8TGJ1	51 aa		0.48	□□□□□ -2.33
TFB1	YDR311W	VMA9	Q3E7B6	73 aa		0.46	□□□□□ -2.34
TFB1	YDR311W	SIP18	P50263	79 aa		0.44	□□□□□ -2.34
TFB1	YDR311W	YMR001C-A	Q8TGS9	76 aa		0.44	□□□□□ -2.34
TFB1	YDR311W	RPS27B	P38711	82 aa		0.4	□□□□□ -2.34
TFB1	YDR311W	Q0297	Q9ZZV8	51 aa		0.4	□□□□□ -2.34
TFB1	YDR311W	YLR157W-D	P0CE99	70 aa		0.39	□□□□□ -2.35
TFB1	YDR311W	TOS6	P48560	102 aa		0.38	□□□□□ -2.35
TFB1	YDR311W	YOR008C-A	Q3E7B9	74 aa		0.38	□□□□□ -2.35
TFB1	YDR311W	YOR192C-C	Q3E736	78 aa		0.37	□□□□□ -2.35
TFB1	YDR311W	YBR230W-A	Q3E762	66 aa		0.34	□□□□□ -2.36
TFB1	YDR311W	RPS29A	P41057	56 aa	Known RBP	0.31	□□□□□ -2.36
TFB1	YDR311W	YKL023C-A	Q2V2P3	75 aa		0.3	□□□□□ -2.36
TFB1	YDR311W	YGR146C-A	Q8TGT9	53 aa		0.29	□□□□□ -2.36
TFB1	YDR311W	YLL006W-A	Q3E814	58 aa		0.19	□□□□□ -2.38
TFB1	YDR311W	YPR010C-A	A5Z2X5	72 aa		0.15	□□□□□ -2.39
TFB1	YDR311W	YGL258W-A	Q3E740	77 aa		0.11	□□□□□ -2.39
TFB1	YDR311W	COA2	Q3E823	68 aa		0.11	□□□□□ -2.39
TFB1	YDR311W	HOR7	Q05827	59 aa		0.11	□□□□□ -2.39
TFB1	YDR311W	YOR072W-B	Q3E832	53 aa		0.09	□□□□□ -2.4
TFB1	YDR311W	RPL39	P04650	51 aa		0.07	□□□□□ -2.4
TFB1	YDR311W	NCE101	Q02820	53 aa		0.06	□□□□□ -2.4
TFB1	YDR311W	YDR034C-A	P0C289	58 aa		0.05	□□□□□ -2.4
TFB1	YDR311W	YMR105W-A	Q8TGS8	64 aa		0.03	□□□□□ -2.4
TFB1	YDR311W	YLL066W-B	Q8TGJ7	56 aa		0.02	□□□□□ -2.41
TFB1	YDR311W	Q0017	Q9ZZX8	53 aa		0.01	□□□□□ -2.41
TFB1	YDR311W	TOM7	P53507	60 aa		0	□□□□□ -2.41
TFB1	YDR311W	YHR050W-A	Q05451	56 aa		-0.07	□□□□□ -2.42
TFB1	YDR311W	YOR316C-A	Q3E806	69 aa		-0.07	□□□□□ -2.42
TFB1	YDR311W	YHR073W-A	P0C5N7	58 aa		-0.14	□□□□□ -2.43
TFB1	YDR311W	YML054C-A	Q3E809	52 aa		-0.15	□□□□□ -2.43
TFB1	YDR311W	YJL133C-A	Q3E7A3	74 aa		-0.17	□□□□□ -2.44
TFB1	YDR311W	PMP3	P87284	55 aa		-0.18	□□□□□ -2.44
TFB1	YDR311W	YLR342W-A	Q3E810	57 aa		-0.19	□□□□□ -2.44
TFB1	YDR311W	DDR2	P89113	61 aa		-0.21	□□□□□ -2.44
TFB1	YDR311W	COX9	P07255	59 aa		-0.22	□□□□□ -2.44
TFB1	YDR311W	RPL29	P05747	59 aa	Predicted RBP	-0.23	□□□□□ -2.45
TFB1	YDR311W	YJL127C-B	Q3E828	52 aa		-0.28	□□□□□ -2.46
TFB1	YDR311W	SMX2	P40204	77 aa	Known RBP	-0.3	□□□□□ -2.46

Retrieved 63 of 5,963 RNA–protein pairs in 36.4 ms